Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:serotonin transport
go back to main search page
Accession:GO:0006837 term browser browse the term
Definition:The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.



show annotations for term's descendants           Sort by:
 
serotonin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC22A3 solute carrier family 22 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,407,949...49,496,627
Ensembl chr 1:49,407,966...49,496,620
JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in ISO
IEA
RGD
Ensembl
PMID:15994310 GO_REF:0000107 RGD:1580635 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736
JBrowse link
negative regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD300A CD300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr 9:5,952,428...5,976,328 JBrowse link
G CNR1 cannabinoid receptor 1 involved_in ISO PMID:30217553 CACAO PMID:30217553 RGD:15023474 NCBI chr12:47,537,240...47,560,723
Ensembl chr12:47,509,583...47,560,983
JBrowse link
G HRH3 histamine receptor H3 ISO RGD PMID:15470136 RGD:1626430 NCBI chr24:46,239,883...46,243,123 JBrowse link
G HRH3 histamine receptor H3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr24:46,240,971...46,243,281 JBrowse link
G HTR1B 5-hydroxytryptamine receptor 1B involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:38,659,088...38,659,546 JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:15260125 RGD:6480684 NCBI chr28:5,438,872...5,524,385
Ensembl chr28:5,440,388...5,524,191
JBrowse link
G MAOB monoamine oxidase B ISO RGD PMID:12175458 RGD:2316765 NCBI chr  X:37,765,810...37,883,955
Ensembl chr  X:37,765,813...37,883,955
JBrowse link
negative regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPM6B glycoprotein M6B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:10,214,889...10,375,151
Ensembl chr  X:10,214,933...10,374,837
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332
JBrowse link
G SLC18A1 solute carrier family 18 member A1 ISO G-protein mediated uptake inhibition RGD PMID:16926160 RGD:5130998 NCBI chr25:36,859,047...36,904,057
Ensembl chr25:36,872,636...36,904,056
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383
JBrowse link
positive regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:20655906 RGD:5130946 NCBI chr14:43,366,849...43,414,398
Ensembl chr14:43,368,340...43,415,142
JBrowse link
G LGALS3 galectin 3 ISO RGD PMID:8347574 RGD:9685207 NCBI chr 8:30,977,438...30,994,711
Ensembl chr 8:30,983,633...30,994,705
JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:25261262 RGD:11532763 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736
JBrowse link
regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone ISO RGD PMID:21947356 RGD:5507821 NCBI chr29:15,831,944...15,840,560
Ensembl chr29:15,831,944...15,834,384
JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:50,005,277...50,006,548
Ensembl chr 2:50,002,740...50,006,548
JBrowse link
regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGB3 integrin subunit beta 3 involved_in ISO (MGI:6101340|PMID:29038237) UniProt PMID:29038237 MGI:6101340 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451
JBrowse link
serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD300A CD300a molecule acts_upstream_of ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr 9:5,952,428...5,976,328 JBrowse link
G FCER1A Fc epsilon receptor Ia acts_upstream_of_or_within ISO (MGI:86632|PMID:8252632)
(MGI:85068|PMID:9000133)
MGI PMID:8252632 PMID:9000133 MGI:85068 MGI:86632 NCBI chr38:22,683,478...22,688,842
Ensembl chr38:22,683,477...22,690,763
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within ISO (MGI:85068|PMID:9000133) MGI PMID:9000133 MGI:85068 NCBI chr 1:95,903,501...95,955,577
Ensembl chr 1:95,903,566...95,955,583
JBrowse link
serotonin secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD300A CD300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr 9:5,952,428...5,976,328 JBrowse link
serotonin secretion by platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER1G Fc epsilon receptor Ig involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:21,267,841...21,271,036
Ensembl chr38:21,268,001...21,270,940
JBrowse link
G P2RX1 purinergic receptor P2X 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2671726|PMID:12913094) MGI
Ensembl
Ensembl
PMID:12913094 GO_REF:0000107 MGI:2671726 NCBI chr 9:47,674,175...47,694,358
Ensembl chr 9:47,675,300...47,688,858
JBrowse link
G SYK spleen associated tyrosine kinase involved_in ISO (MGI:87668|PMID:9171347) UniProt PMID:9171347 MGI:87668 NCBI chr 1:95,903,501...95,955,577
Ensembl chr 1:95,903,566...95,955,583
JBrowse link
serotonin secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XBP1 X-box binding protein 1 ISO RGD PMID:16889758 RGD:2326003 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105
JBrowse link
serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC18A1 solute carrier family 18 member A1 involved_in IEA
ISO
GOC
RGD
PMID:19008227 GO_REF:0000108 RGD:5131091 NCBI chr25:36,859,047...36,904,057
Ensembl chr25:36,872,636...36,904,056
JBrowse link
G SLC18A2 solute carrier family 18 member A2 involved_in ISO
IEA
RGD
GOC
PMID:20007701 GO_REF:0000108 RGD:5130957 NCBI chr28:27,731,709...27,809,341
Ensembl chr28:27,731,004...27,767,993
JBrowse link
G SLC22A1 solute carrier family 22 member 1 involved_in ISO (PMID:24688079) ARUK-UCL PMID:24688079 NCBI chr 1:49,268,978...49,296,522 JBrowse link
G SLC22A2 solute carrier family 22 member 2 involved_in ISO (PMID:9687576) ARUK-UCL PMID:9687576 NCBI chr 1:49,327,621...49,348,435
Ensembl chr 1:49,327,296...49,348,435
JBrowse link
G SLC22A3 solute carrier family 22 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,407,949...49,496,627
Ensembl chr 1:49,407,966...49,496,620
JBrowse link
G SLC29A4 solute carrier family 29 member 4 involved_in ISO (PMID:20858707)
(MGI:5484979|PMID:23255610), (MGI:6436398|PMID:20858707)
ARUK-UCL PMID:20858707 PMID:23255610 MGI:5484979 MGI:6436398 NCBI chr 6:12,607,708...12,634,572
Ensembl chr 6:12,608,713...12,622,478
JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in ISO
IEA
IBA
(PMID:21873635) RGD
Ensembl
GOC
GO_Central
GOC
PMID:12944413 PMID:21873635 GO_REF:0000107 GO_REF:0000108 RGD:1580638 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16442
    localization 5254
      establishment of localization 4614
        transport 4448
          ion transport 1600
            cation transport 1235
              serotonin transport 27
                serotonin secretion + 17
                serotonin uptake + 11
paths to the root