Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:serotonin transport
go back to main search page
Accession:GO:0006837 term browser browse the term
Definition:The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
 
serotonin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a3 solute carrier family 22 member 3 involved_in ISO (MGI:3805626|PMID:18513366) ARUK-UCL PMID:18513366 MGI:3805626 NCBI chrNW_004955439:20,367,324...20,476,891
Ensembl chrNW_004955439:20,367,333...20,476,891
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in ISO (MGI:4820706|PMID:19308295)
PMID:11709063
RGD
UniProt
PMID:11709063 PMID:15994310 PMID:19308295 MGI:4820706 RGD:1580635 RGD:8553990 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
JBrowse link
negative regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chrNW_004955553:1,335,854...1,356,001
Ensembl chrNW_004955553:1,336,227...1,460,376
JBrowse link
G Cnr1 cannabinoid receptor 1 involved_in ISO PMID:30217553 CACAO PMID:30217553 RGD:15023474 NCBI chrNW_004955411:15,052,151...15,077,320
Ensembl chrNW_004955411:15,052,163...15,077,320
JBrowse link
G Hrh3 histamine receptor H3 ISO RGD PMID:15470136 RGD:1626430 NCBI chrNW_004955528:1,819,247...1,826,707
Ensembl chrNW_004955528:1,819,247...1,826,707
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B involved_in ISO (MGI:1098377|PMID:9349547) UniProt PMID:9349547 MGI:1098377 NCBI chrNW_004955502:5,640,919...5,646,899
Ensembl chrNW_004955502:5,645,644...5,646,816
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 ISO RGD PMID:15260125 RGD:6480684 NCBI chrNW_004955425:2,321,420...2,420,420
Ensembl chrNW_004955425:2,321,420...2,420,530
JBrowse link
G Maob monoamine oxidase B ISO RGD PMID:12175458 RGD:2316765 NCBI chrNW_004955516:4,328,286...4,473,419
Ensembl chrNW_004955516:4,328,476...4,472,593
JBrowse link
negative regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpm6b glycoprotein M6B involved_in ISO (MGI:5426133|PMID:18581270) UniProt PMID:18581270 MGI:5426133 NCBI chrNW_004955519:4,287,203...4,432,188
Ensembl chrNW_004955519:4,287,026...4,432,188
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO (MGI:3710710|PMID:17452640) UniProt PMID:17452640 MGI:3710710 NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566
JBrowse link
G Slc18a1 solute carrier family 18 member A1 ISO G-protein mediated uptake inhibition RGD PMID:16926160 RGD:5130998 NCBI chrNW_004955403:43,821,978...43,848,403
Ensembl chrNW_004955403:43,821,296...43,848,399
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:16882008) UniProt PMID:16882008 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
positive regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:20655906 RGD:5130946 NCBI chrNW_004955410:31,830,333...31,874,384
Ensembl chrNW_004955410:31,828,506...31,875,100
JBrowse link
G Lgals3 galectin 3 ISO RGD PMID:8347574 RGD:9685207 NCBI chrNW_004955409:8,448,120...8,452,437
Ensembl chrNW_004955409:8,447,774...8,452,438
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:25261262 RGD:11532763 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
JBrowse link
regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone ISO RGD PMID:21947356 RGD:5507821 NCBI chrNW_004955444:12,989,210...12,991,300 JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A involved_in ISO (MGI:1314969|PMID:9826725) UniProt PMID:9826725 MGI:1314969 NCBI chrNW_004955446:4,913,181...4,917,726
Ensembl chrNW_004955446:4,913,884...4,915,146
JBrowse link
regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb3 integrin subunit beta 3 involved_in ISO (MGI:6101340|PMID:29038237) UniProt PMID:29038237 MGI:6101340 NCBI chrNW_004955478:9,788,192...9,830,254 JBrowse link
serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule acts_upstream_of ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chrNW_004955553:1,335,854...1,356,001
Ensembl chrNW_004955553:1,336,227...1,460,376
JBrowse link
G Fcer1a Fc fragment of IgE receptor Ia acts_upstream_of_or_within ISO (MGI:85068|PMID:9000133)
(MGI:86632|PMID:8252632)
MGI PMID:8252632 PMID:9000133 MGI:85068 MGI:86632 NCBI chrNW_004955468:11,094,792...11,101,191
Ensembl chrNW_004955468:11,094,788...11,101,173
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (MGI:85068|PMID:9000133) MGI PMID:9000133 MGI:85068 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
serotonin secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chrNW_004955553:1,335,854...1,356,001
Ensembl chrNW_004955553:1,336,227...1,460,376
JBrowse link
serotonin secretion by platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1g Fc fragment of IgE receptor Ig involved_in ISO (MGI:87668|PMID:9171347) UniProt PMID:9171347 MGI:87668 NCBI chrNW_004955468:12,971,931...12,975,206
Ensembl chrNW_004955468:12,971,931...12,975,206
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO (MGI:2671726|PMID:12913094) MGI PMID:12913094 MGI:2671726 NCBI chrNW_004955467:12,955,663...12,971,547
Ensembl chrNW_004955467:12,955,672...12,971,547
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (MGI:87668|PMID:9171347) UniProt PMID:9171347 MGI:87668 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
serotonin secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xbp1 X-box binding protein 1 ISO RGD PMID:16889758 RGD:2326003 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc18a1 solute carrier family 18 member A1 ISO RGD PMID:19008227 RGD:5131091 NCBI chrNW_004955403:43,821,978...43,848,403
Ensembl chrNW_004955403:43,821,296...43,848,399
JBrowse link
G Slc18a2 solute carrier family 18 member A2 ISO RGD PMID:20007701 RGD:5130957 NCBI chrNW_004955431:21,949,553...21,979,679
Ensembl chrNW_004955431:21,949,576...21,979,679
JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in ISO (PMID:9687576) ARUK-UCL PMID:9687576 NCBI chrNW_004955439:20,567,241...20,608,281
Ensembl chrNW_004955439:20,567,212...20,609,105
JBrowse link
G Slc22a3 solute carrier family 22 member 3 involved_in ISO (PMID:20858707) ARUK-UCL PMID:20858707 NCBI chrNW_004955439:20,367,324...20,476,891
Ensembl chrNW_004955439:20,367,333...20,476,891
JBrowse link
G Slc29a4 solute carrier family 29 member 4 involved_in ISO (PMID:20858707)
(MGI:5484979|PMID:23255610), (MGI:6436398|PMID:20858707)
ARUK-UCL PMID:20858707 PMID:23255610 MGI:5484979 MGI:6436398 NCBI chrNW_004955460:10,155,916...10,181,974
Ensembl chrNW_004955460:10,155,899...10,181,974
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in ISO (MGI:3710710|PMID:17452640)
(MGI:2178281|PMID:9547354), (MGI:6436398|PMID:20858707)
PMID:10716733
PMID:14642278
PMID:15627510
(PMID:16870614), (PMID:17506858), (PMID:8987735)
(PMID:7681602)
RGD
UniProt
ARUK-UCL
CACAO
PMID:7681602 PMID:8987735 PMID:9547354 PMID:10716733 PMID:12944413 More... MGI:2178281 MGI:3710710 MGI:6436398 RGD:1580638 RGD:8553308 RGD:8553687 RGD:8554226 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12195
    localization 4113
      establishment of localization 3516
        transport 3355
          ion transport 1197
            cation transport 922
              serotonin transport 25
                serotonin secretion + 16
                serotonin uptake + 10
paths to the root