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ONTOLOGY REPORT - ANNOTATIONS


Term:serotonin transport
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Accession:GO:0006837 term browser browse the term
Definition:The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.


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serotonin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a3 solute carrier family 22 member 3 involved_in ISO (MGI:3805626|PMID:18513366) RGD PMID:18513366 MGI:3805626 NCBI chr 1:48,235,476...48,324,617
Ensembl chr 1:48,235,476...48,324,612
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in TAS
ISO
IDA
IMP
(MGI:4820706|PMID:19308295)
PMID:11709063
RGD PMID:19308295 PMID:12220705 PMID:11709063 PMID:15994310 MGI:4820706, RGD:730261, RGD:8553990, RGD:1580635 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link
negative regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a Cd300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) RGD PMID:12874256 MGI:3721168 NCBI chr10:99,929,801...99,942,674
Ensembl chr10:99,929,801...99,942,674
JBrowse link
G Cnr1 cannabinoid receptor 1 involved_in IMP PMID:30217553 CACAO PMID:30217553 RGD:15023474 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Hrh3 histamine receptor H3 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:15470136 PMID:21873635 RGD:1626430, RGD:13792537 NCBI chr 3:167,191,551...167,196,642
Ensembl chr 3:167,191,558...167,196,642
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B involved_in ISS
ISO
GO_REF:0000024
(MGI:1098377|PMID:9349547)
UniProt
RGD
PMID:9349547 GO_REF:0000024 MGI:1098377 NCBI chr 8:82,513,572...82,534,892
Ensembl chr 8:82,517,360...82,534,549
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:15260125 RGD:6480684 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Maob monoamine oxidase B IMP RGD PMID:12175458 RGD:2316765 NCBI chr  X:5,907,327...6,010,996
Ensembl chr  X:5,907,266...6,011,003
JBrowse link
negative regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpm6b glycoprotein m6b involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5426133|PMID:18581270)
PMID:21873635
UniProt
RGD
PMID:18581270 PMID:21873635 GO_REF:0000024 MGI:5426133, RGD:13792537 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO (MGI:3710710|PMID:17452640) RGD PMID:17452640 MGI:3710710 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Slc18a1 solute carrier family 18 member A1 IMP G-protein mediated uptake inhibition RGD PMID:16926160 RGD:5130998 NCBI chr16:20,653,268...20,687,051
Ensembl chr16:20,653,508...20,687,051
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:16882008) RGD PMID:16882008 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
positive regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:20655906 RGD:5130946 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Lgals3 galectin 3 IDA RGD PMID:8347574 RGD:9685207 NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
JBrowse link
G Slc6a4 solute carrier family 6 member 4 IMP RGD PMID:25261262 RGD:11532763 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link
regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone IDA RGD PMID:21947356 RGD:5507821 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A involved_in ISS
ISO
GO_REF:0000024
(MGI:1314969|PMID:9826725)
UniProt
RGD
PMID:9826725 GO_REF:0000024 MGI:1314969 NCBI chr 2:36,694,174...36,695,442
Ensembl chr 2:36,694,174...36,695,442
JBrowse link
regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb3 integrin subunit beta 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:6101340|PMID:29038237)
UniProt
RGD
PMID:29038237 GO_REF:0000024 MGI:6101340 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1a Fc fragment of IgE receptor Ia acts_upstream_of_or_within ISO MGI:2383982 (MGI:85068|PMID:9000133), (MGI:86632|PMID:8252632) RGD PMID:8252632 PMID:9000133 MGI:85068 MGI:86632 NCBI chr13:85,686,099...85,692,394
Ensembl chr13:85,686,092...85,692,351
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa acts_upstream_of_or_within ISO (MGI:78617|PMID:8552190) RGD PMID:8552190 MGI:78617 NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO MGI:2384078 (MGI:85068|PMID:9000133) RGD PMID:9000133 MGI:85068 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
serotonin secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a Cd300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) RGD PMID:12874256 MGI:3721168 NCBI chr10:99,929,801...99,942,674
Ensembl chr10:99,929,801...99,942,674
JBrowse link
serotonin secretion by platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1g Fc fragment of IgE receptor Ig involved_in ISO (MGI:87668|PMID:9171347) RGD PMID:9171347 MGI:87668 NCBI chr13:83,649,447...83,654,215
Ensembl chr13:83,649,449...83,671,443
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO MGI:2181608 (MGI:2671726|PMID:12913094) RGD PMID:12913094 MGI:2671726 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:87668|PMID:9171347)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9171347 GO_REF:0000024 GO_REF:0000107 MGI:87668 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
serotonin secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xbp1 X-box binding protein 1 IDA RGD PMID:16889758 RGD:2326003 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc18a1 solute carrier family 18 member A1 IDA RGD PMID:19008227 RGD:5131091 NCBI chr16:20,653,268...20,687,051
Ensembl chr16:20,653,508...20,687,051
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IMP RGD PMID:20007701 RGD:5130957 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Slc22a1 solute carrier family 22 member 1 involved_in ISO (PMID:24688079) RGD PMID:24688079 NCBI chr 1:48,076,657...48,103,679
Ensembl chr 1:48,076,666...48,103,678
JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in ISO
IEA
(PMID:9687576)
GO_REF:0000107
RGD
Ensembl
PMID:9687576 GO_REF:0000107 NCBI chr 1:48,121,061...48,163,268
Ensembl chr 1:48,121,061...48,163,268
JBrowse link
G Slc22a3 solute carrier family 22 member 3 involved_in ISO (PMID:20858707) RGD PMID:20858707 NCBI chr 1:48,235,476...48,324,617
Ensembl chr 1:48,235,476...48,324,612
JBrowse link
G Slc29a4 solute carrier family 29 member 4 involved_in ISO (PMID:20858707)
(MGI:5484979|PMID:23255610), (MGI:6436398|PMID:20858707)
RGD PMID:20858707 PMID:23255610 MGI:5484979 MGI:6436398 NCBI chr12:11,853,540...11,884,660
Ensembl chr12:11,853,540...11,874,834
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in IMP
ISO
IDA
IBA
(MGI:2178281|PMID:9547354), (MGI:3710710|PMID:17452640), (MGI:6436398|PMID:20858707)
PMID:15627510
PMID:10716733
PMID:14642278
(PMID:16870614), (PMID:17506858), (PMID:7681602), (PMID:8987735)
PMID:21873635
RGD PMID:7681602 PMID:8987735 PMID:9547354 PMID:16870614 PMID:17452640 More... MGI:2178281 MGI:3710710 MGI:6436398, RGD:1580638, RGD:8553308, RGD:8554226, RGD:8553687, RGD:13792537 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          ion transport 1640
            cation transport 1263
              serotonin transport 27
                serotonin secretion + 17
                serotonin uptake + 11
paths to the root