Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:manganese ion transport
go back to main search page
Accession:GO:0006828 term browser browse the term
Definition:The directed movement of manganese (Mn) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


show annotations for term's descendants           Sort by:
manganese ion transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:12707275)		 UniProt
GO_Central
RGD		 PMID:12707275 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:114,913,551...115,034,706
Ensembl chr 8:106,034,636...106,156,006 		JBrowse link
G Atp2c2 ATPase secretory pathway Ca2+ transporting 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:64,662,729...64,719,998
Ensembl chr19:47,754,120...47,811,368 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:9730978)
MGI:2446573 (PMID:11067873)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:9730978 PMID:11067873 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:83,406,327...83,417,252
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Slc11a2 solute carrier family 11 member 2 involved_in ISO
IEA
IBA		 (PMID:17293870)
GO_REF:0000107
GO_REF:0000033
(PMID:17109629)		 RGD
Ensembl
GO_Central		 PMID:17109629 PMID:17293870 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:133,381,878...133,429,921
Ensembl chr 7:131,503,081...131,540,145 		JBrowse link
G Slc30a10 solute carrier family 30, member 10 involved_in ISO
IEA
IBA		 (PMID:22341972), (PMID:26728129)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:22341972 PMID:26728129 GO_REF:0000033 GO_REF:0000107 NCBI chr13:99,529,664...99,584,442
Ensembl chr13:96,998,143...97,009,103 		JBrowse link
G Slc41a2 solute carrier family 41 member 2 involved_in ISO (PMID:15809054) RGD PMID:15809054 NCBI chr 7:20,383,714...20,491,178
Ensembl chr 7:20,383,757...20,491,166 		JBrowse link
G Tmem165 transmembrane protein 165 involved_in ISO
IEA
ISS		 (PMID:32047108)
GO_REF:0000107
(PMID:30622138)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:30622138 PMID:32047108 GO_REF:0000024 GO_REF:0000107 NCBI chr14:32,347,688...32,372,916
Ensembl chr14:31,993,493...32,018,717 		JBrowse link
G Trpc7 transient receptor potential cation channel, subfamily C, member 7 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:7,707,954...7,839,064
Ensembl chr17:7,709,583...7,833,435 		JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 acts_upstream_of_or_within ISO
IEA		 (PMID:11804595)
GO_REF:0000107		 RGD
Ensembl		 PMID:11804595 GO_REF:0000107 NCBI chr20:10,703,190...10,752,795
Ensembl chr20:10,707,014...10,753,181 		JBrowse link
manganese ion export across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a10 solute carrier family 30, member 10 involved_in ISO
IEA		 (PMID:25319704), (PMID:27307044)
GO_REF:0000107		 RGD
Ensembl		 PMID:25319704 PMID:27307044 GO_REF:0000107 NCBI chr13:99,529,664...99,584,442
Ensembl chr13:96,998,143...97,009,103 		JBrowse link
manganese ion transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:114,913,551...115,034,706
Ensembl chr 8:106,034,636...106,156,006 		JBrowse link
G Atp2c2 ATPase secretory pathway Ca2+ transporting 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:64,662,729...64,719,998
Ensembl chr19:47,754,120...47,811,368 		JBrowse link
G Ryr2 ryanodine receptor 2 IMP RGD PMID:19116207 RGD:7242196 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:83,406,327...83,417,252
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Slc11a2 solute carrier family 11 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:133,381,878...133,429,921
Ensembl chr 7:131,503,081...131,540,145 		JBrowse link
G Slc39a14 solute carrier family 39 member 14 involved_in ISO
IEA		 (PMID:31028174), (PMID:31699897)
GO_REF:0000107
(PMID:18270315), (PMID:21653899)		 RGD
Ensembl		 PMID:18270315 PMID:21653899 PMID:31028174 PMID:31699897 GO_REF:0000107 NCBI chr15:51,786,517...51,833,260
Ensembl chr15:45,376,917...45,423,524 		JBrowse link
G Slc39a8 solute carrier family 39 member 8 involved_in IDA
IEA
ISO		 PMID:22898811
GO_REF:0000107
(PMID:16638970), (PMID:28481222)
(PMID:28481222), (PMID:29453449), (PMID:31699897)		 Ensembl
RGD		 PMID:16638970 PMID:28481222 PMID:29453449 PMID:31699897 PMID:22898811 GO_REF:0000107, RGD:15090842 NCBI chr 2:226,845,686...226,992,668
Ensembl chr 2:224,256,654...224,319,129 		JBrowse link
G Tmem165 transmembrane protein 165 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:32,347,688...32,372,916
Ensembl chr14:31,993,493...32,018,717 		JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:10,703,190...10,752,795
Ensembl chr20:10,707,014...10,753,181 		JBrowse link
mitochondrial manganese ion transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc39a8 solute carrier family 39 member 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:29453449)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:29453449 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:226,845,686...226,992,668
Ensembl chr 2:224,256,654...224,319,129 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    localization 5728
      establishment of localization 5075
        transport 4763
          monoatomic ion transport 1391
            monoatomic cation transport 1184
              metal ion transport 1001
                transition metal ion transport 127
                  manganese ion transport 12
                    manganese ion transmembrane transport + 10
paths to the root