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ONTOLOGY REPORT - ANNOTATIONS


Term:porphyrin-containing compound metabolic process
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Accession:GO:0006778 term browser browse the term
Definition:The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
Synonyms:related_synonym: porphyrin metabolic process;   porphyrin metabolism


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porphyrin-containing compound metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5898211|PMID:27507172)
(PMID:27507172), (PMID:33007128)
UniProt
RGD
PMID:27507172 PMID:33007128 GO_REF:0000024 MGI:5898211 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA Uroporphyrinogen oxidation, generating hydrogen peroxide RGD PMID:12907239 RGD:2306674 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 acts_upstream_of_or_within ISO MGI:2182351 (MGI:1202011|PMID:9461503), (MGI:1934807|PMID:11274970) RGD PMID:9461503 PMID:11274970 MGI:1202011 MGI:1934807 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Hmbs hydroxymethylbilane synthase IDA Porphobilinogen
Uroporphyrinogen
RGD PMID:11786116 PMID:3963818 PMID:3702597 PMID:593266 PMID:994723 More... RGD:26923962, RGD:4144803, RGD:4144820, RGD:26884337, RGD:25440497, RGD:25440495, RGD:25394584, RGD:25394583, RGD:26923963, RGD:2301707, RGD:4144783 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Slc11a2 solute carrier family 11 member 2 acts_upstream_of_or_within ISO MGI:1856400 (MGI:78347|PMID:4404581) RGD PMID:4404581 MGI:78347 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
bilirubin conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 TAS RGD PMID:11829457 RGD:70480 NCBI chr 9:88,801,344...88,808,465 JBrowse link
heme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in
acts_upstream_of_or_within
ISO (PMID:12928484)
(MGI:3604933|PMID:16103131), (MGI:3640032|PMID:16782876)
RGD PMID:12928484 PMID:16103131 PMID:16782876 MGI:3604933 MGI:3640032 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667
JBrowse link
G Cox15 cytochrome c oxidase assembly homolog COX15 involved_in ISO
IBA
UniProtKB:Q7KZN9-1 (PMID:12474143)
PMID:21873635
RGD PMID:12474143 PMID:21873635 RGD:13792537 NCBI chr 1:242,605,588...242,622,279
Ensembl chr 1:242,605,588...242,622,261
JBrowse link
heme B biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 NOT|involved_in ISO (PMID:22655043) RGD PMID:22655043 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
heme biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb10 ATP binding cassette subfamily B member 10 involved_in ISO (MGI:5648801|PMID:24421385) RGD PMID:24421385 MGI:5648801 NCBI chr19:51,952,655...51,982,910
Ensembl chr19:51,952,681...51,982,753
JBrowse link
G Alad aminolevulinate dehydratase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
ISS
(MGI:53493|PMID:4959158), (MGI:53609|PMID:4981581), (MGI:63121|PMID:14050799)
(PMID:11032836)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:4959158 PMID:4981581 PMID:11032836 PMID:14050799 PMID:1764448 More... GO_REF:0000024 MGI:53493 MGI:53609 MGI:63121, RGD:1599020, RGD:13792537 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G Alas1 5'-aminolevulinate synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:106,876,514...106,889,852
Ensembl chr 8:106,876,514...106,889,917
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3694153|PMID:9446639)
PMID:21873635
UniProt
RGD
PMID:9446639 PMID:21873635 GO_REF:0000024 MGI:3694153, RGD:13792537 NCBI chr  X:19,463,146...19,486,526
Ensembl chr  X:19,463,171...19,486,519
JBrowse link
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5447588|PMID:23135403)
GO_REF:0000024
(PMID:23135403)
RGD
UniProt
PMID:23135403 PMID:21873635 GO_REF:0000024 MGI:5447588, RGD:13792537 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668
JBrowse link
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667
JBrowse link
G Cpox coproporphyrinogen oxidase acts_upstream_of_or_within IDA
ISO
(MGI:77569|PMID:8407975) RGD PMID:8407975 PMID:3955059 MGI:77569, RGD:1600961 NCBI chr11:41,936,585...41,946,568
Ensembl chr11:41,936,591...41,946,746
JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:1858114|MGI:2384729 (MGI:1327758|PMID:9989256), (MGI:3620268|PMID:16503645), (MGI:3696634|PMID:15496139), (MGI:3794459|PMID:16306232), (MGI:79136|PMID:8611576)
PMID:21873635
(PMID:27599036)
RGD PMID:8611576 PMID:9989256 PMID:15496139 PMID:16306232 PMID:16503645 More... MGI:1327758 MGI:3620268 MGI:3696634 MGI:3794459 MGI:79136, RGD:1600961, RGD:13792537 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Fxn frataxin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:221,874,007...221,897,841
Ensembl chr 1:221,872,420...221,897,540
JBrowse link
G Hmbs hydroxymethylbilane synthase involved_in IBA
ISO
PMID:21873635
(PMID:18936296)
RGD PMID:18936296 PMID:21873635 RGD:13792537 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384429 (MGI:1352605|PMID:10617683) RGD PMID:10617683 MGI:1352605 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 involved_in ISO
ISS
IEA
(PMID:27599036)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:27599036 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:115,832,865...115,841,060
Ensembl chr  X:115,832,884...115,888,682
JBrowse link
G Ppox protoporphyrinogen oxidase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:3687447|PMID:3346226)
(PMID:7713909)
PMID:21873635
RGD PMID:3346226 PMID:7713909 PMID:3955059 PMID:21873635 MGI:3687447, RGD:1600961, RGD:13792537 NCBI chr13:83,697,661...83,701,998
Ensembl chr13:83,664,891...83,701,805
JBrowse link
G Slc11a2 solute carrier family 11 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856400 (MGI:3691553|PMID:11739192)
Ensembl
RGD
PMID:11739192 GO_REF:0000107 MGI:3691553 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Slc25a39 solute carrier family 25, member 39 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:87,362,494...87,367,358
Ensembl chr10:87,362,490...87,367,260
JBrowse link
G Tmem14c transmembrane protein 14C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:23,733,769...23,739,906
Ensembl chr17:23,733,894...23,753,320
JBrowse link
G Urod uroporphyrinogen decarboxylase acts_upstream_of_or_within
involved_in
NAS
ISO
IBA
IC
MGI:2687172 (MGI:3703836|PMID:17360334)
PMID:21873635
RGD PMID:17360334 PMID:3658690 PMID:21873635 PMID:15736160 MGI:3703836, RGD:70052, RGD:13792537, RGD:2301379 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808
JBrowse link
G Uros uroporphyrinogen III synthase involved_in ISO
IBA
(PMID:3805019)
PMID:21873635
RGD PMID:3805019 PMID:21873635 RGD:13792537 NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvra biliverdin reductase A involved_in ISO
IEA
(PMID:10858451)
GO_REF:0000104
RGD
UniProt
PMID:10858451 GO_REF:0000104 NCBI chr 3:114,340,778...114,366,048
Ensembl chr 3:114,340,838...114,366,033
JBrowse link
G Blvrb biliverdin reductase B involved_in ISO (PMID:7929092) RGD PMID:7929092 NCBI chr 1:82,738,646...82,756,312
Ensembl chr 1:82,738,695...82,770,375
JBrowse link
G Hmox1 heme oxygenase 1 involved_in IDA
IBA
ISO
PMID:21873635
(PMID:17915953)
RGD PMID:17915953 PMID:15226268 PMID:21873635 RGD:1547877, RGD:13792537 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hmox2 heme oxygenase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:10,797,076...10,831,178
Ensembl chr10:10,797,055...10,831,148
JBrowse link
G Hmox2-ps1 heme oxygenase (decycling) 2, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,299,951...200,302,161 JBrowse link
heme metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISO
ISS
(PMID:33007128)
GO_REF:0000024
RGD
UniProt
PMID:33007128 GO_REF:0000024 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:223,702,410...223,723,076
Ensembl chr 2:223,702,412...223,723,072
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 1:82,171,914...82,179,980
Ensembl chr 1:82,169,949...82,179,979
JBrowse link
G Fech ferrochelatase TAS RGD PMID:9113083 RGD:1598930 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hpx hemopexin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2447193 (MGI:3799398|PMID:18556779)
RGD PMID:18556779 PMID:21873635 MGI:3799398, RGD:13792537 NCBI chr 1:159,932,819...159,940,327
Ensembl chr 1:159,932,755...159,940,328
JBrowse link
G Slco1a6 solute carrier organic anion transporter family, member 1a6 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:175,072,143...175,107,950
Ensembl chr 4:175,072,143...175,117,263
JBrowse link
G Urod uroporphyrinogen decarboxylase acts_upstream_of_or_within ISO MGI:2687172 (MGI:1929011|PMID:11134514) RGD PMID:11134514 MGI:1929011 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808
JBrowse link
heme O biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667
JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in IBA
ISO
PMID:21873635
(PMID:17915953)
RGD PMID:17915953 PMID:21873635 RGD:13792537 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hmox2 heme oxygenase 2 involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:12114211 PMID:21873635 RGD:625638, RGD:13792537 NCBI chr10:10,797,076...10,831,178
Ensembl chr10:10,797,055...10,831,148
JBrowse link
G Hmox2-ps1 heme oxygenase (decycling) 2, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,299,951...200,302,161 JBrowse link
porphyrin-containing compound biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISO (PMID:17006453) RGD PMID:17006453 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
G Ank1 ankyrin 1 acts_upstream_of_or_within ISO MGI:1856298 (MGI:54462|PMID:658175) RGD PMID:658175 MGI:54462 NCBI chr16:68,876,294...69,054,812
Ensembl chr16:68,877,504...69,054,759
JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:2384729 (MGI:2384247|PMID:12149233) RGD PMID:12149233 MGI:2384247 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Hmbs hydroxymethylbilane synthase IDA uroporphyrin I
Urophorphyrin I
Uroporphyrinogen
Uroporphyrin I
RGD PMID:11786116 PMID:3963818 PMID:3702597 PMID:994723 PMID:6694518 More... RGD:26923962, RGD:4144803, RGD:4144820, RGD:25440497, RGD:25330343, RGD:25440495, RGD:25394584, RGD:25394583, RGD:26923963, RGD:2301707, RGD:4144783 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Ppox protoporphyrinogen oxidase involved_in IDA
ISO
(PMID:7713909) RGD PMID:7713909 PMID:3663105 RGD:1599180 NCBI chr13:83,697,661...83,701,998
Ensembl chr13:83,664,891...83,701,805
JBrowse link
G Slc11a2 solute carrier family 11 member 2 acts_upstream_of_or_within ISO MGI:1856400 (MGI:54462|PMID:658175) RGD PMID:658175 MGI:54462 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 acts_upstream_of_or_within ISO MGI:1856181|MGI:1856377 (MGI:54462|PMID:658175) RGD PMID:658175 MGI:54462 NCBI chr13:86,203,504...86,279,371
Ensembl chr13:86,203,504...86,279,371
JBrowse link
G Sptb spectrin, beta, erythrocytic acts_upstream_of_or_within ISO MGI:1856378 (MGI:54462|PMID:658175) RGD PMID:658175 MGI:54462 NCBI chr 6:95,310,342...95,437,221
Ensembl chr 6:95,310,326...95,437,118
JBrowse link
G Urod uroporphyrinogen decarboxylase IDA RGD PMID:12381387 RGD:4144825 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808
JBrowse link
G Uros uroporphyrinogen III synthase acts_upstream_of_or_within ISO MGI:3620007 (MGI:72967|PMID:7607680) RGD PMID:7607680 MGI:3620006 MGI:72967 NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
JBrowse link
positive regulation of heme biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb7 ATP binding cassette subfamily B member 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:30765471)
(MGI:6695684|PMID:30765471)
UniProt
Ensembl
RGD
PMID:30765471 GO_REF:0000024 GO_REF:0000107 MGI:6695684 NCBI chr  X:69,295,598...69,436,775
Ensembl chr  X:69,295,552...69,436,858
JBrowse link
G Slc6a9 solute carrier family 6 member 9 involved_in ISO (MGI:6450351|PMID:28495915) RGD PMID:28495915 MGI:6450351 NCBI chr 5:131,374,562...131,408,733
Ensembl chr 5:131,374,542...131,408,728
JBrowse link
protoporphyrinogen IX biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G Alas1 5'-aminolevulinate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:106,876,514...106,889,852
Ensembl chr 8:106,876,514...106,889,917
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:19,463,146...19,486,526
Ensembl chr  X:19,463,171...19,486,519
JBrowse link
G Cpox coproporphyrinogen oxidase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:3814086 PMID:21873635 GO_REF:0000041, RGD:4145128, RGD:13792537 NCBI chr11:41,936,585...41,946,568
Ensembl chr11:41,936,591...41,946,746
JBrowse link
G Hmbs hydroxymethylbilane synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Ireb2 iron responsive element binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181660 (MGI:3695992|PMID:15831703)
Ensembl
RGD
PMID:15831703 GO_REF:0000107 MGI:3695992 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Ppox protoporphyrinogen oxidase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr13:83,697,661...83,701,998
Ensembl chr13:83,664,891...83,701,805
JBrowse link
G Urod uroporphyrinogen decarboxylase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808
JBrowse link
G Uros uroporphyrinogen III synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
JBrowse link
protoporphyrinogen IX metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 acts_upstream_of_or_within ISO MGI:1353448|MGI:95513 (MGI:3581470|PMID:15931390) RGD PMID:15931390 MGI:3581470 NCBI chr12:10,710,771...10,744,597
Ensembl chr12:10,705,874...10,744,573
JBrowse link
G Fech ferrochelatase involved_in
acts_upstream_of_or_within
ISO (PMID:15123683)
MGI:1353448|MGI:95513 (MGI:3581470|PMID:15931390)
RGD PMID:15123683 PMID:15931390 MGI:3581470 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Ppox protoporphyrinogen oxidase IDA RGD PMID:3663105 RGD:1599180 NCBI chr13:83,697,661...83,701,998
Ensembl chr13:83,664,891...83,701,805
JBrowse link
regulation of heme biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srrd SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) RGD PMID:28802827 MGI:6282940 NCBI chr12:44,294,675...44,300,287
Ensembl chr12:44,294,271...44,300,287
JBrowse link
G Tmem14c transmembrane protein 14C acts_upstream_of_or_within ISO MGI:4351741 (MGI:5581691|PMID:25157825) RGD PMID:25157825 MGI:5581691 NCBI chr17:23,733,769...23,739,906
Ensembl chr17:23,733,894...23,753,320
JBrowse link
uroporphyrinogen III biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uros uroporphyrinogen III synthase involved_in IDA
IBA
ISO
PMID:21873635
(PMID:18004775), (PMID:3174619), (PMID:3805019)
RGD PMID:3174619 PMID:3805019 PMID:18004775 PMID:17763925 PMID:21873635 RGD:4144811, RGD:13792537 NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
JBrowse link
uroporphyrinogen III metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Urod uroporphyrinogen decarboxylase IDA converts uroporphyrinogen to coproporphyrinogen via hepta-, hexa- and penta-carboxyporphyrinogen RGD PMID:15736160 RGD:2301379 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808
JBrowse link

Term paths to the root
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  biological_process 19492
    metabolic process 11797
      cellular metabolic process 10717
        cellular aromatic compound metabolic process 5596
          tetrapyrrole metabolic process 49
            porphyrin-containing compound metabolic process 40
              chlorophyll metabolic process + 0
              heme metabolic process + 33
              porphyrin-containing compound biosynthetic process + 27
              porphyrin-containing compound catabolic process + 6
              protoporphyrinogen IX metabolic process + 11
              uroporphyrinogen III metabolic process + 2
paths to the root