ONTOLOGY REPORT - ANNOTATIONS |
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Term: | water-soluble vitamin metabolic process |
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Accession: | GO:0006767
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browse the term
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Definition: | The chemical reactions and pathways involving any of a diverse group of vitamins that are soluble in water. |
Synonyms: | exact_synonym: | water-soluble vitamin metabolism |
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Btd |
biotinidase |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:4888510 (MGI:5544528|PMID:24075304) MGI:4888510 (MGI:4888153|PMID:21051254) |
RGD |
PMID:21051254 PMID:24075304 PMID:21873635 |
MGI:4888153 MGI:5544528, RGD:13792537 |
NCBI chr16:6,863,068...6,894,345
Ensembl chr16:6,862,407...6,940,945
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Hlcs |
holocarboxylase synthetase |
involved_in |
ISO |
MGI:6446223 (MGI:7260196|PMID:35385533) |
RGD |
PMID:35385533 |
MGI:7260196 |
NCBI chr11:33,455,806...33,635,197
Ensembl chr11:33,455,809...33,624,222
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Slc5a6 |
solute carrier family 5 member 6 |
involved_in |
ISO |
MGI:5493496 (MGI:5474531|PMID:23104561) |
RGD |
PMID:23104561 |
MGI:5474531 |
NCBI chr 6:25,319,187...25,331,713
Ensembl chr 6:25,320,442...25,331,712
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Cubn |
cubilin |
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IMP |
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RGD |
PMID:14576052 |
RGD:8554807 |
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Abcd4 |
ATP binding cassette subfamily D member 4 |
involved_in |
ISO |
(PMID:22922874), (PMID:33845046) |
RGD |
PMID:22922874 PMID:33845046 |
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NCBI chr 6:104,246,459...104,260,965
Ensembl chr 6:104,246,468...104,280,276
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Amn |
amnion associated transmembrane protein |
involved_in |
ISO |
(PMID:14576052) |
RGD |
PMID:14576052 |
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NCBI chr 6:130,311,372...130,318,815
Ensembl chr 6:130,311,372...130,318,815
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Cubn |
cubilin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:14576052) |
Ensembl RGD |
PMID:14576052 |
GO_REF:0000107 |
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Mmaa |
metabolism of cobalamin associated A |
involved_in |
ISO |
(PMID:31056463) |
RGD |
PMID:31056463 |
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NCBI chr19:28,619,060...28,649,319
Ensembl chr19:28,619,087...28,649,319
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Mmab |
metabolism of cobalamin associated B |
involved_in |
ISO |
(PMID:12514191) |
RGD |
PMID:12514191 |
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NCBI chr12:42,159,109...42,172,518
Ensembl chr12:42,159,089...42,172,490
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Mmachc |
metabolism of cobalamin associated C |
involved_in |
IBA ISO |
PMID:21873635 (PMID:19700356), (PMID:22642810), (PMID:23825108) |
RGD |
PMID:19700356 PMID:22642810 PMID:23825108 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:130,166,056...130,172,735
Ensembl chr 5:130,166,451...130,172,601
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Mmadhc |
metabolism of cobalamin associated D |
involved_in |
IEA ISO ISS |
GO_REF:0000002 (PMID:22156578), (PMID:24722857) GO_REF:0000024 |
InterPro RGD UniProt |
PMID:22156578 PMID:24722857 |
GO_REF:0000002 GO_REF:0000024 |
NCBI chr 3:34,708,649...34,726,554
Ensembl chr 3:34,708,649...34,726,771
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Mtr |
5-methyltetrahydrofolate-homocysteine methyltransferase |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:2180496 (MGI:1930456|PMID:11158293) (PMID:23825108) |
Ensembl RGD |
PMID:11158293 PMID:23825108 |
GO_REF:0000107 MGI:1930456 |
NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
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Mtrr |
5-methyltetrahydrofolate-homocysteine methyltransferase reductase |
involved_in |
ISO |
(MGI:3710265|PMID:17369066) |
RGD |
PMID:17369066 |
MGI:3710265 |
NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425
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Mthfs |
methenyltetrahydrofolate synthetase |
involved_in |
ISO |
(PMID:12764149) |
RGD |
PMID:12764149 |
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NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089
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Pm20d2 |
peptidase M20 domain containing 2 |
NOT|involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:47,566,059...47,586,334
Ensembl chr 5:47,566,072...47,586,212
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Aldh1l1 |
aldehyde dehydrogenase 1 family, member L1 |
involved_in |
IDA |
PMID:1848231 |
UniProt |
PMID:1848231 |
RGD:632027 |
NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465
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Aldh1l2 |
aldehyde dehydrogenase 1 family, member L2 |
involved_in |
ISO |
(MGI:6489626|PMID:33168096) |
RGD |
PMID:33168096 |
MGI:6489626 |
NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776
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Dhfr |
dihydrofolate reductase |
involved_in |
IDA IBA |
PMID:20424322 PMID:21873635 |
BHF-UCL GO_Central |
PMID:20424322 PMID:21873635 |
RGD:10054082, RGD:13792537 |
NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
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Folr1 |
folate receptor alpha |
acts_upstream_of_or_within |
ISO |
MGI:2383986 (MGI:2669340|PMID:12854656) |
RGD |
PMID:12854656 |
MGI:2669340 |
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
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Mtrr |
5-methyltetrahydrofolate-homocysteine methyltransferase reductase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5512657|PMID:24074862) (PMID:11466310) |
UniProt RGD |
PMID:11466310 PMID:24074862 |
GO_REF:0000024 MGI:5512657 |
NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425
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Shmt1 |
serine hydroxymethyltransferase 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:11278996) |
RGD |
PMID:11278996 PMID:21873635 |
RGD:13792537 |
NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820
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Shmt2 |
serine hydroxymethyltransferase 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
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Akr1a1 |
aldo-keto reductase family 1 member A1 |
acts_upstream_of_or_within involved_in |
ISO IMP |
(MGI:3588122|PMID:15769935) PMID:22820017 MGI:4239556 (MGI:4834110|PMID:20410296) |
RGD |
PMID:15769935 PMID:20410296 PMID:22820017 |
MGI:3588122 MGI:4834110, RGD:13825440 |
NCBI chr 5:130,092,945...130,130,277
Ensembl chr 5:130,092,732...130,113,674
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Akr1b1 |
aldo-keto reductase family 1 member B1 |
involved_in |
ISO |
MGI:5008171 (MGI:4834110|PMID:20410296) |
RGD |
PMID:20410296 |
MGI:4834110 |
NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
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Gsto1 |
glutathione S-transferase omega 1 |
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IMP |
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RGD |
PMID:9786866 |
RGD:70644 |
NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
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Gulo |
gulonolactone (L-) oxidase |
involved_in |
ISS IEA |
GO_REF:0000024 GO_REF:0000107 |
UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:40,205,677...40,227,766
Ensembl chr15:40,205,665...40,227,874
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Rgn |
regucalcin |
involved_in |
IBA ISO ISS |
PMID:21873635 MGI:2670511 (MGI:3623658|PMID:16585534), (MGI:5486063|PMID:23349732) GO_REF:0000024 |
RGD UniProt |
PMID:16585534 PMID:23349732 PMID:21873635 |
GO_REF:0000024 MGI:3623658 MGI:5486063, RGD:13792537 |
NCBI chr X:1,619,030...1,634,456
Ensembl chr X:1,619,032...1,634,450
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Clstn3 |
calsyntenin 3 |
involved_in |
ISO |
(PMID:34673103) (MGI:6728656|PMID:33672967) |
RGD |
PMID:33672967 PMID:34673103 |
MGI:6728656 |
NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
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Gclc |
glutamate-cysteine ligase, catalytic subunit |
acts_upstream_of_or_within |
ISO |
MGI:2429419 (MGI:1928560|PMID:11118286) |
RGD |
PMID:11118286 |
MGI:1928560 |
NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
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Gsto1 |
glutathione S-transferase omega 1 |
involved_in |
ISO IBA ISS |
(PMID:11511179) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:11511179 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
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Gsto2 |
glutathione S-transferase omega 2 |
involved_in |
ISO IEA IBA ISS |
(PMID:15970797) GO_REF:0000107 PMID:21873635 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:15970797 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr 1:246,731,314...246,757,592
Ensembl chr 1:246,732,089...246,753,866
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Mir125a |
microRNA 125a |
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IDA |
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RGD |
PMID:27085842 |
RGD:26884454 |
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
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Slc23a2 |
solute carrier family 23 member 2 |
involved_in |
IMP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:10331392 PMID:21873635 |
RGD:634186, RGD:13792537 |
NCBI chr 3:119,302,651...119,395,289
Ensembl chr 3:119,302,666...119,460,343
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Nnmt |
nicotinamide N-methyltransferase |
involved_in |
ISO |
(MGI:5708799|PMID:26168293) (PMID:21823666), (PMID:8182091) |
RGD |
PMID:8182091 PMID:21823666 PMID:26168293 |
MGI:5708799 |
NCBI chr 8:48,928,663...48,947,734
Ensembl chr 8:48,933,598...48,946,655
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Vnn1 |
vanin 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:11491533), (PMID:25478849) |
RGD |
PMID:11491533 PMID:25478849 PMID:21873635 |
RGD:13792537 |
NCBI chr 1:21,537,084...21,547,395
Ensembl chr 1:21,537,094...21,547,395
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Vnn3 |
vanin 3 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:2149227|PMID:11491533) |
RGD |
PMID:11491533 PMID:21873635 |
MGI:2149227, RGD:13792537 |
NCBI chr 1:21,571,364...21,583,626
Ensembl chr 1:21,571,364...21,583,626
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Clybl |
citramalyl-CoA lyase |
involved_in |
ISO IEA |
(MGI:5926841|PMID:29056341) GO_REF:0000107 |
RGD Ensembl |
PMID:29056341 |
GO_REF:0000107 MGI:5926841 |
NCBI chr15:99,283,644...99,505,697
Ensembl chr15:99,283,650...99,505,695
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Pdxk |
pyridoxal kinase |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110
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Pdxkl1 |
pyridoxal kinase like 1 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr20:10,162,934...10,192,572
Ensembl chr20:10,164,099...10,192,739
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Pdxk |
pyridoxal kinase |
involved_in |
ISO |
(MGI:6492058|PMID:33318193) |
RGD |
PMID:33318193 |
MGI:6492058 |
NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110
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Pdxk |
pyridoxal kinase |
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IDA |
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RGD |
PMID:2988502 |
RGD:2303018 |
NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110
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Pnpo |
pyridoxamine 5'-phosphate oxidase |
involved_in |
ISO IBA |
(PMID:12824491) PMID:21873635 |
RGD |
PMID:12824491 PMID:21873635 |
RGD:13792537 |
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
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Pdxp |
pyridoxal phosphatase |
involved_in |
IEA ISO ISS |
GO_REF:0000107 MGI:6367625 (MGI:5545856|PMID:24338687), (MGI:5545857|PMID:24338473), (MGI:6277432|PMID:30327125), (MGI:6695679|PMID:25783190) (PMID:14522954), (PMID:8132548) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:8132548 PMID:14522954 PMID:24338473 PMID:24338687 PMID:25783190 PMID:30327125 More...
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GO_REF:0000024 GO_REF:0000107 MGI:5545856 MGI:5545857 MGI:6277432 MGI:6695679 |
NCBI chr 7:110,472,515...110,477,963
Ensembl chr 7:110,472,515...110,477,963
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Alpl |
alkaline phosphatase, biomineralization associated |
involved_in |
ISO |
(MGI:76012|PMID:7550313) |
RGD |
PMID:7550313 |
MGI:76012 |
NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
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Pdxk |
pyridoxal kinase |
involved_in |
ISO |
(MGI:6386909|PMID:31935373), (MGI:6492058|PMID:33318193) |
RGD |
PMID:31935373 PMID:33318193 |
MGI:6386909 MGI:6492058 |
NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110
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Pnpo |
pyridoxamine 5'-phosphate oxidase |
involved_in |
ISO |
(MGI:6386909|PMID:31935373) |
RGD |
PMID:31935373 |
MGI:6386909 |
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
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Pdxk |
pyridoxal kinase |
involved_in |
ISO |
(MGI:6386909|PMID:31935373) |
RGD |
PMID:31935373 |
MGI:6386909 |
NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110
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Pnpo |
pyridoxamine 5'-phosphate oxidase |
involved_in |
ISO |
(MGI:6386909|PMID:31935373) |
RGD |
PMID:31935373 |
MGI:6386909 |
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
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Pnpo |
pyridoxamine 5'-phosphate oxidase |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
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Clybl |
citramalyl-CoA lyase |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (PMID:29056341) PMID:21873635 (MGI:5926841|PMID:29056341) |
UniProt RGD |
PMID:29056341 PMID:21873635 |
GO_REF:0000024 MGI:5926841, RGD:13792537 |
NCBI chr15:99,283,644...99,505,697
Ensembl chr15:99,283,650...99,505,695
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Rfk |
riboflavin kinase |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438 Ensembl chr X:214,799,825...214,807,438
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Flad1 |
flavin adenine dinucleotide synthetase 1 |
involved_in |
ISO |
(MGI:6103054|PMID:28402850) |
RGD |
PMID:28402850 |
MGI:6103054 |
NCBI chr 2:174,819,451...174,828,921
Ensembl chr 2:174,819,453...174,828,977
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Rfk |
riboflavin kinase |
involved_in |
ISO IBA |
(PMID:19641494) MGI:4356069 (MGI:5565643|PMID:24272050) PMID:21873635 |
RGD |
PMID:19641494 PMID:24272050 PMID:21873635 |
MGI:5565643, RGD:13792537 |
NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438 Ensembl chr X:214,799,825...214,807,438
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Slc52a2 |
solute carrier family 52 member 2 |
involved_in |
ISO |
(MGI:5766100|PMID:26791833), (MGI:6709300|PMID:23911957) |
RGD |
PMID:23911957 PMID:26791833 |
MGI:5766100 MGI:6709300 |
NCBI chr 7:108,246,003...108,267,642
Ensembl chr 7:108,262,612...108,268,034
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Slc52a3 |
solute carrier family 52 member 3 |
involved_in |
ISO IEA |
MGI:4363008 (MGI:6472232|PMID:33116204) GO_REF:0000107 |
RGD Ensembl |
PMID:33116204 |
GO_REF:0000107 MGI:6472232 |
NCBI chr 3:140,498,924...140,515,845
Ensembl chr 3:140,509,473...140,514,096
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Slc19a2 |
solute carrier family 19 member 2 |
involved_in |
ISO |
(MGI:7484782|PMID:8186267) |
RGD |
PMID:8186267 |
MGI:7484782 |
NCBI chr13:76,601,975...76,616,175
Ensembl chr13:76,601,900...76,616,172
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Slc19a3 |
solute carrier family 19 member 3 |
involved_in |
ISO |
MGI:4948864 (MGI:5917227|PMID:28665968), (MGI:7484782|PMID:8186267) |
RGD |
PMID:8186267 PMID:28665968 |
MGI:5917227 MGI:7484782 |
NCBI chr 9:84,275,722...84,299,368
Ensembl chr 9:84,277,024...84,299,337
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Slc25a19 |
solute carrier family 25 member 19 |
involved_in |
ISO |
MGI:3691853 (MGI:3691401|PMID:17035501), (MGI:7484782|PMID:8186267) |
RGD |
PMID:8186267 PMID:17035501 |
MGI:3691401 MGI:7484782 |
NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447
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Thtpa |
thiamine triphosphatase |
involved_in |
ISO IEA |
(MGI:3796446|PMID:18276586) GO_REF:0000107 |
RGD Ensembl |
PMID:18276586 |
GO_REF:0000107 MGI:3796446 |
NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
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Tpk1 |
thiamin pyrophosphokinase 1 |
involved_in |
ISO IBA IEA |
(PMID:11342111) PMID:21873635 (MGI:1350425|PMID:10567383) GO_REF:0000041 |
RGD UniProt |
PMID:10567383 PMID:11342111 PMID:21873635 |
GO_REF:0000041 MGI:1350425, RGD:13792537 |
NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
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Thtpa |
thiamine triphosphatase |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:3796446|PMID:18276586) PMID:21873635 |
UniProt RGD |
PMID:18276586 PMID:21873635 |
GO_REF:0000024 MGI:3796446, RGD:13792537 |
NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
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G |
Acp3 |
acid phosphatase 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3849266|PMID:18940592) |
Ensembl RGD |
PMID:18940592 |
GO_REF:0000107 MGI:3849266 |
NCBI chr 8:104,905,570...104,956,146
Ensembl chr 8:104,905,586...104,954,236
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G |
Thtpa |
thiamine triphosphatase |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
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G |
Tpk1 |
thiamin pyrophosphokinase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:1350425|PMID:10567383) |
RGD |
PMID:10567383 |
MGI:1350425 |
NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
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Term paths to the root
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