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ONTOLOGY REPORT - ANNOTATIONS

Term:ubiquinone biosynthetic process
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Accession:GO:0006744 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
Synonyms:exact_synonym: coenzyme Q biosynthesis;   coenzyme Q biosynthetic process;   ubiquinone anabolism;   ubiquinone biosynthesis;   ubiquinone formation;   ubiquinone synthesis
 narrow_synonym: coenzyme Q10 biosynthesis;   coenzyme Q10 biosynthetic process;   coenzyme Q6 biosynthesis;   coenzyme Q6 biosynthetic process;   coenzyme Q8 biosynthesis;   coenzyme Q8 biosynthetic process;   coenzyme Q9 biosynthesis;   coenzyme Q9 biosynthetic process
 xref: MetaCyc:UBISYN-PWY


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ubiquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COQ2 coenzyme Q2, polyprenyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15153069) MGI
UniProt
Ensembl
TreeGrafter		 PMID:15153069 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:135,130,486...135,150,428
Ensembl chr 8:135,130,453...135,150,031 		JBrowse link
G COQ3 coenzyme Q3, methyltransferase involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:66,321,288...66,347,088
Ensembl chr 1:66,232,181...66,346,575 		JBrowse link
G COQ4 coenzyme Q4 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:268,756,690...268,768,355
Ensembl chr 1:268,756,685...268,768,343 		JBrowse link
G COQ5 coenzyme Q5, methyltransferase involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr14:40,461,610...40,480,586
Ensembl chr14:40,460,857...40,478,830 		JBrowse link
G COQ6 coenzyme Q6, monooxygenase involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 7:97,258,617...97,270,927
Ensembl chr 7:97,258,653...97,271,093 		JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:11585841)
(PMID:11716496)
(PMID:19478076)		 RGD
MGI
GO_Central
TreeGrafter
UniProt
InterPro		 PMID:8660658 PMID:11585841 PMID:11716496 PMID:19478076 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:69815 NCBI chr 3:26,366,006...26,373,604
Ensembl chr 3:26,366,000...26,373,584 		JBrowse link
G COQ8A coenzyme Q8A involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr10:14,597,237...14,643,394
Ensembl chr10:14,596,599...14,643,772 		JBrowse link
G COQ8B coenzyme Q8B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:48,919,000...48,939,194
Ensembl chr 6:48,919,520...48,938,111 		JBrowse link
G COQ9 coenzyme Q9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23255162) InterPro
MGI
TreeGrafter
Ensembl
UniProt		 PMID:23255162 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:19,373,052...19,390,738
Ensembl chr 6:19,372,711...19,390,820 		JBrowse link
G FAXC failed axon connections homolog, metaxin like GST domain containing involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:66,223,926...66,309,800
Ensembl chr 1:66,232,181...66,346,575 		JBrowse link
G FDXR ferredoxin reductase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:6,372,224...6,382,769
Ensembl chr12:6,372,009...6,382,769 		JBrowse link
G GGPS1 geranylgeranyl diphosphate synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:55,907,885...55,924,037
Ensembl chr14:55,908,674...55,923,988 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:48,890,056...48,918,195
Ensembl chr 6:48,889,801...48,918,173 		JBrowse link
G PDSS1 decaprenyl diphosphate synthase subunit 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:49,069,258...49,120,393
Ensembl chr10:49,068,942...49,120,320 		JBrowse link
G PDSS2 decaprenyl diphosphate synthase subunit 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:73,234,950...73,510,533
Ensembl chr 1:73,235,100...73,510,535 		JBrowse link
G RTN4IP1 reticulon 4 interacting protein 1 involved_in ISO (PMID:37884807) FlyBase PMID:37884807 NCBI chr 1:72,763,453...72,816,450
Ensembl chr 1:72,762,855...72,815,540 		JBrowse link
G UBIAD1 UbiA prenyltransferase domain containing 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 6:71,419,559...71,431,275
Ensembl chr 6:71,419,602...71,433,210 		JBrowse link
regulation of ubiquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCK2 aarF domain containing kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,153,832...9,173,009
Ensembl chr18:9,153,839...9,173,007 		JBrowse link
G PPTC7 protein phosphatase targeting COQ7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:31,905,379...31,946,555
Ensembl chr14:31,906,262...31,946,554 		JBrowse link
ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COQ3 coenzyme Q3, methyltransferase ISO RGD PMID:8125303 RGD:69814 NCBI chr 1:66,321,288...66,347,088
Ensembl chr 1:66,232,181...66,346,575 		JBrowse link
G UBIAD1 UbiA prenyltransferase domain containing 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:71,419,559...71,431,275
Ensembl chr 6:71,419,602...71,433,210 		JBrowse link
ubiquinone-6 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:65,760,078...65,788,703
Ensembl chr 5:65,759,727...65,788,646 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    metabolic process 10358
      cellular metabolic process 8632
        cellular ketone metabolic process 254
          quinone metabolic process 26
            ubiquinone metabolic process 23
              ubiquinone biosynthetic process 20
                negative regulation of ubiquinone biosynthetic process 0
                positive regulation of ubiquinone biosynthetic process 0
                regulation of ubiquinone biosynthetic process + 2
                ubiquinone biosynthetic process from chorismate 0
                ubiquinone biosynthetic process from tyrosine 0
                ubiquinone biosynthetic process via 2-polyprenylphenol 0
                ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate 2
                ubiquinone-6 biosynthetic process 1
paths to the root