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ONTOLOGY REPORT - ANNOTATIONS

Term:NADH metabolic process
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Accession:GO:0006734 term browser browse the term
Definition:The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.
Synonyms:exact_synonym: NADH metabolism;   reduced NAD metabolic process;   reduced NAD metabolism;   reduced nicotinamide adenine dinucleotide metabolic process;   reduced nicotinamide adenine dinucleotide metabolism


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NADH metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLST dihydrolipoamide S-succinyltransferase ISO RGD PMID:9405249 RGD:1359804 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,124...98,111,572 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO RGD PMID:12351438 RGD:2303499 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825 		JBrowse link
G GPD1L glycerol-3-phosphate dehydrogenase 1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19745168) Ensembl
MGI		 PMID:19745168 GO_REF:0000107 NCBI chr13:18,126,471...18,176,669
Ensembl chr13:18,127,088...18,176,666 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO RGD PMID:12351438 RGD:2303499 NCBI chr15:63,592,723...63,728,636
Ensembl chr15:63,619,762...63,728,633 		JBrowse link
G MDH1 malate dehydrogenase 1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:12351438 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2303499 NCBI chr 3:78,247,229...78,263,085
Ensembl chr 3:78,244,999...78,268,600 		JBrowse link
G MDH1B malate dehydrogenase 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:109,989,095...110,021,237
Ensembl chr15:109,990,050...110,021,416 		JBrowse link
G MDH2 malate dehydrogenase 2 ISO RGD PMID:12351438 RGD:2303499 NCBI chr 3:10,120,121...10,132,705
Ensembl chr 3:10,120,083...10,132,752 		JBrowse link
G ME1 malic enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:82,799,878...82,989,895
Ensembl chr 1:82,799,684...82,991,085 		JBrowse link
G NUDT12 nudix hydrolase 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,045,592...109,059,616 		JBrowse link
G NUDT13 nudix hydrolase 13 involved_in ISO (MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:6368098 NCBI chr14:75,918,056...75,958,187
Ensembl chr14:75,918,171...75,958,178 		JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:99,472,347...99,477,953
Ensembl chr 4:99,472,350...99,477,944 		JBrowse link
G OGDH oxoglutarate dehydrogenase ISO RGD PMID:9712727 RGD:2306877 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964 		JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,851,206...235,869,634 		JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,879...69,401,151 		JBrowse link
G ENO2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr 5:63,799,927...63,809,067
Ensembl chr 5:63,799,930...63,809,410 		JBrowse link
G ENO3 enolase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:51,954,614...51,959,991
Ensembl chr12:51,954,613...51,961,496 		JBrowse link
G FOXK1 forkhead box K1 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:30700909) UniProt
Ensembl		 PMID:30700909 GO_REF:0000107 NCBI chr 3:3,556,139...3,621,150
Ensembl chr 3:3,556,161...3,621,142 		JBrowse link
G FOXK2 forkhead box K2 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6281052|PMID:30700909) UniProt
Ensembl		 PMID:30700909 GO_REF:0000107 MGI:6281052 NCBI chr12:560,848...615,646
Ensembl chr12:560,852...615,739 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:10777777), (PMID:28918937)
(PMID:12581789)		 MGI PMID:10777777 PMID:12581789 PMID:28918937 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991 		JBrowse link
G HK1 hexokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,383,328...72,460,927
Ensembl chr14:72,351,246...72,460,924 		JBrowse link
G PFKL phosphofructokinase, liver type involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:207,167,287...207,191,688
Ensembl chr13:207,167,281...207,191,671 		JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:19696889) Ensembl
GO_Central
TreeGrafter
MGI		 PMID:19696889 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,476,123...78,526,997 		JBrowse link
G PFKP phosphofructokinase, platelet involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:67,022,652...67,082,336
Ensembl chr10:67,022,655...67,082,449 		JBrowse link
G PGAM1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) UniProt PMID:12189148 NCBI chr14:108,822,782...108,832,818
Ensembl chr14:108,822,812...108,833,058 		JBrowse link
G PGAM2 phosphoglycerate mutase 2 involved_in ISO (PMID:23951293) MGI PMID:23951293 NCBI chr18:48,693,832...48,712,787
Ensembl chr18:48,710,347...48,713,862 		JBrowse link
G PGK1 phosphoglycerate kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:62,187,472...62,210,321
Ensembl chr  X:62,187,434...62,210,705 		JBrowse link
G PKM pyruvate kinase M1/2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,971,807...61,032,780
Ensembl chr 7:60,975,667...61,004,316
Ensembl chr 7:60,975,667...61,004,316 		JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,839,473...63,842,853
Ensembl chr 5:63,838,506...63,843,134 		JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPD1 glycerol-3-phosphate dehydrogenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11147825) Ensembl
MGI		 PMID:11147825 GO_REF:0000107 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825 		JBrowse link
NADH oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOB aldolase, fructose-bisphosphate B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:243,127,870...243,141,504
Ensembl chr 1:243,110,585...243,141,418 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:11147825) RGD
MGI
GO_Central
TreeGrafter
Ensembl		 PMID:9550546 PMID:11147825 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1641824 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 ISO RGD PMID:29389585 RGD:25823193 NCBI chr 6:17,292,962...17,302,593
Ensembl chr 6:17,292,770...17,302,590 		JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:19635791 RGD:7242950 NCBI chr 7:75,187,195...75,197,613
Ensembl chr 7:75,187,197...75,197,733 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    metabolic process 10358
      organic substance metabolic process 9930
        organonitrogen compound metabolic process 5025
          purine-containing compound metabolic process 505
            purine nucleotide metabolic process 470
              NAD metabolic process 54
                NADH metabolic process 32
                  NADH oxidation + 4
                  NADH regeneration + 15
                  sulphoglycolysis 0
Path 2
Term Annotations click to browse term
  biological_process 17799
    metabolic process 10358
      organic substance metabolic process 9930
        organic cyclic compound metabolic process 5601
          nucleobase-containing compound metabolic process 5148
            nucleobase-containing small molecule metabolic process 603
              nucleoside phosphate metabolic process 533
                nucleotide metabolic process 526
                  pyridine nucleotide metabolic process 169
                    nicotinamide nucleotide metabolic process 169
                      NAD metabolic process 54
                        NADH metabolic process 32
                          NADH oxidation + 4
                          NADH regeneration + 15
                          sulphoglycolysis 0
paths to the root