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ONTOLOGY REPORT - ANNOTATIONS


Term:NADH metabolic process
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Accession:GO:0006734 term browser browse the term
Definition:The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.
Synonyms:exact_synonym: NADH metabolism;   reduced NAD metabolic process;   reduced NAD metabolism;   reduced nicotinamide adenine dinucleotide metabolic process;   reduced nicotinamide adenine dinucleotide metabolism



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NADH metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLST dihydrolipoamide S-succinyltransferase ISO RGD PMID:9405249 RGD:1359804 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO RGD PMID:12351438 RGD:2303499 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040
JBrowse link
G GPD1L glycerol-3-phosphate dehydrogenase 1 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943631|PMID:19745168) MGI
Ensembl
PMID:19745168 GO_REF:0000107 MGI:4943631 NCBI chr 3:32,026,586...32,088,512
Ensembl chr 3:32,342,776...32,404,172
JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO RGD PMID:12351438 RGD:2303499 NCBI chr2B:43,694,744...43,845,764
Ensembl chr2B:160,938,514...161,117,320
JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO RGD PMID:938457 RGD:2306828 NCBI chr15:57,078,588...57,099,934
Ensembl chr15:76,043,311...76,064,634
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO RGD PMID:938457 RGD:2306828 NCBI chr20:2,766,598...2,772,571
Ensembl chr20:2,529,510...2,535,570
JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO RGD PMID:938457 RGD:2306828 NCBI chr  X:143,336,460...143,345,274
Ensembl chr  X:153,222,309...153,231,135
JBrowse link
G MDH1 malate dehydrogenase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:12351438 GO_REF:0000107 RGD:2303499 NCBI chr2A:63,658,933...63,677,257
Ensembl chr2A:64,785,132...64,803,631
JBrowse link
G MDH2 malate dehydrogenase 2 ISO RGD PMID:12351438 RGD:2303499 NCBI chr 7:67,953,759...67,973,270
Ensembl chr 7:82,497,800...82,516,526
JBrowse link
G ME1 malic enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:81,107,569...81,320,050
Ensembl chr 6:84,382,732...84,595,701
JBrowse link
G NUDT13 nudix hydrolase 13 involved_in ISO (MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:6368098 NCBI chr10:69,656,828...69,696,769
Ensembl chr10:72,118,281...72,139,221
JBrowse link
G OGDH oxoglutarate dehydrogenase ISO RGD PMID:9712727 RGD:2306877 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636
JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,619,490...7,637,558
Ensembl chr 1:8,855,074...8,873,215
JBrowse link
G ENO2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr12:7,043,807...7,053,178
Ensembl chr12:6,958,960...6,968,342
JBrowse link
G ENO3 enolase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,997,052...5,005,221
Ensembl chr17:4,986,116...4,992,876
JBrowse link
G FOXK1 forkhead box K1 acts_upstream_of
involved_in
ISO
IEA
(PMID:30700909) UniProt
Ensembl
PMID:30700909 GO_REF:0000107 NCBI chr 7:4,934,773...5,017,127
Ensembl chr 7:4,975,444...5,056,174
JBrowse link
G FOXK2 forkhead box K2 acts_upstream_of ISO (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052 NCBI chr17:76,930,135...77,018,294 JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (MGI:2651735|PMID:12581789)
(MGI:6106926|PMID:28918937), (MGI:6861792|PMID:10777777)
MGI PMID:10777777 PMID:12581789 PMID:28918937 MGI:2651735 MGI:6106926 MGI:6861792 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G HK1 hexokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045
JBrowse link
G LOC100995352 keratin-associated protein 10-2 involved_in ISO (MGI:5819300|PMID:28049690) MGI PMID:28049690 MGI:5819300
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4356361|PMID:19696889) MGI
Ensembl
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
G PGAM2 phosphoglycerate mutase 2 involved_in ISO (MGI:5543738|PMID:23951293) MGI PMID:23951293 MGI:5543738 NCBI chr 7:44,776,722...44,780,248
Ensembl chr 7:44,843,067...44,845,984
JBrowse link
G PGK1 phosphoglycerate kinase 1 involved_in ISO (MGI:6857632|PMID:30174313) MGI PMID:30174313 MGI:6857632 NCBI chr  X:67,280,269...67,302,307
Ensembl chr  X:77,391,805...77,414,459
JBrowse link
G PKM pyruvate kinase M1/2 involved_in ISO (MGI:5908042|PMID:28630053) MGI PMID:28630053 MGI:5908042 NCBI chr15:51,149,584...51,182,193
Ensembl chr15:69,913,455...69,945,832
JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in ISO (MGI:6857632|PMID:30174313) MGI PMID:30174313 MGI:6857632 NCBI chr12:6,999,275...7,002,678
Ensembl chr12:6,910,813...6,913,612
JBrowse link
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHA lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:62497|PMID:8224816) MGI PMID:8224816 MGI:62497 NCBI chr11:18,432,347...18,445,694
Ensembl chr11:18,115,250...18,128,400
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase acts_upstream_of
involved_in
ISO
IEA
(MGI:4867601|PMID:20935145) MGI
Ensembl
PMID:20935145 GO_REF:0000107 MGI:4867601 NCBI chr12:4,429,945...4,462,142
Ensembl chr12:4,353,272...4,385,380
JBrowse link
G TP53 tumor protein p53 acts_upstream_of
involved_in
ISO
IEA
(MGI:4867601|PMID:20935145) MGI
Ensembl
PMID:20935145 GO_REF:0000107 MGI:4867601 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPD1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1927687|PMID:11147825) MGI
Ensembl
PMID:11147825 GO_REF:0000107 MGI:1927687 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040
JBrowse link
NADH oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOB aldolase, fructose-bisphosphate B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1927687|PMID:11147825) RGD
Ensembl
MGI
PMID:9550546 PMID:11147825 GO_REF:0000107 MGI:1927687 RGD:1641824 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040
JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 ISO RGD PMID:29389585 RGD:25823193 NCBI chr16:50,090,696...50,106,495
Ensembl chr16:69,470,288...69,489,731
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:19635791 RGD:7242950 NCBI chr14:4,872,276...4,882,118
Ensembl chr14:22,996,813...23,006,775
JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr2B:59,071,123...59,297,327
Ensembl chr2B:176,532,940...176,641,894
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4867601|PMID:20935145) MGI
Ensembl
PMID:20935145 GO_REF:0000107 MGI:4867601 NCBI chr12:4,429,945...4,462,142
Ensembl chr12:4,353,272...4,385,380
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4867601|PMID:20935145) MGI
Ensembl
PMID:20935145 GO_REF:0000107 MGI:4867601 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15338
    metabolic process 10018
      NADH metabolic process 35
        NADH oxidation + 4
        NADH regeneration + 13
        glucose catabolic process to lactate via pyruvate + 5
        sulphoglycolysis 0
paths to the root