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ONTOLOGY REPORT - ANNOTATIONS


Term:NADH metabolic process
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Accession:GO:0006734 term browser browse the term
Definition:The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.
Synonyms:exact_synonym: NADH metabolism;   reduced NAD metabolic process;   reduced NAD metabolism;   reduced nicotinamide adenine dinucleotide metabolic process;   reduced nicotinamide adenine dinucleotide metabolism


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NADH metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlst dihydrolipoamide S-succinyltransferase IDA RGD PMID:9405249 RGD:1359804 NCBI chr 6:108,936,534...108,961,322
Ensembl chr 6:108,936,664...108,959,803
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 IDA RGD PMID:12351438 RGD:2303499 NCBI chr 7:141,368,928...141,377,931
Ensembl chr 7:141,370,491...141,377,928
JBrowse link
G Gpd1l glycerol-3-phosphate dehydrogenase 1-like ISO (MGI:MGI:4943631|PMID:19745168) RGD PMID:19745168 MGI:MGI:4943631 NCBI chr 8:122,957,570...122,987,236
Ensembl chr 8:122,954,948...122,987,191
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 IDA RGD PMID:12351438 RGD:2303499 NCBI chr 3:43,223,892...43,359,069
Ensembl chr 3:43,255,567...43,359,074
JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha IDA RGD PMID:938457 RGD:2306828 NCBI chr 8:59,164,601...59,183,899
Ensembl chr 8:59,164,572...59,183,908
JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta IDA RGD PMID:938457 RGD:2306828 NCBI chr 3:122,808,564...122,813,638
Ensembl chr 3:122,808,564...122,813,583
JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma IDA RGD PMID:938457 RGD:2306828 NCBI chr  X:156,999,803...157,008,735
Ensembl chr  X:156,999,826...157,008,733
JBrowse link
G Mdh1 malate dehydrogenase 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12351438, PMID:21873635 RGD:2303499, RGD:13792537 NCBI chr14:106,378,349...106,393,642
Ensembl chr14:106,378,942...106,393,670
JBrowse link
G Mdh1b malate dehydrogenase 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:70,403,612...70,450,204
Ensembl chr 9:70,404,093...70,450,170
JBrowse link
G Mdh2 malate dehydrogenase 2 IDA RGD PMID:12351438 RGD:2303499 NCBI chr12:23,941,451...23,954,406
Ensembl chr12:23,941,448...23,954,431
JBrowse link
G Nudt12 nudix hydrolase 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:105,680,603...105,693,374
Ensembl chr 9:105,680,670...105,693,357
JBrowse link
G Nudt13 nudix hydrolase 13 ISO (MGI:MGI:6368098|PMID:28755312) RGD PMID:28755312 MGI:MGI:6368098 NCBI chr15:4,434,341...4,454,871
Ensembl chr15:4,434,313...4,454,958
JBrowse link
G Nudt17 nudix hydrolase 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,831,546...198,836,191
Ensembl chr 2:198,831,546...198,834,925
JBrowse link
G Ogdh oxoglutarate dehydrogenase IDA RGD PMID:9712727 RGD:2306877 NCBI chr14:86,414,924...86,481,903
Ensembl chr14:86,414,949...86,613,327
JBrowse link
G Vcp valosin-containing protein ISO (PMID:23498975) RGD PMID:23498975 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 IDA
ISO
PMID:15041191
(PMID:29775581), (PMID:3529090)
RGD PMID:3529090, PMID:29775581, PMID:15041191 RGD:2302788 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Eno2 enolase 2 IDA PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr 4:157,285,192...157,294,090
Ensembl chr 4:157,285,179...157,294,047
JBrowse link
G Foxk1 forkhead box K1 ISO (PMID:30700909) RGD PMID:30700909 NCBI chr12:14,183,436...14,244,634
Ensembl chr12:14,180,029...14,244,316
JBrowse link
G Foxk2 forkhead box K2 ISO (MGI:MGI:6281052|PMID:30700909) RGD PMID:30700909 MGI:MGI:6281052 NCBI chr10:110,468,905...110,518,854
Ensembl chr10:110,469,290...110,518,848
JBrowse link
G LOC100911625 gamma-enolase-like IDA PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr 9:20,251,564...20,260,465
Ensembl chr 9:20,251,521...20,260,505
JBrowse link
G Pfkl phosphofructokinase, liver type IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:11,393,860...11,415,889
Ensembl chr20:11,393,877...11,415,882
JBrowse link
G Pfkm phosphofructokinase, muscle ISO
IBA
IEA
MGI:MGI:4356541 (MGI:MGI:4356361|PMID:19696889)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19696889, PMID:21873635 GO_REF:0000107, MGI:MGI:4356361, RGD:13792537 NCBI chr 7:139,702,066...139,722,132
Ensembl chr 7:139,685,573...139,722,132
JBrowse link
G Pfkp phosphofructokinase, platelet IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:68,510,765...68,574,387
Ensembl chr17:68,511,064...68,559,471
JBrowse link
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldha lactate dehydrogenase A ISO MGI:MGI:2384559 (MGI:MGI:62497|PMID:8224816) RGD PMID:8224816 MGI:MGI:62497 NCBI chr 1:102,900,288...102,909,713
Ensembl chr 1:102,900,286...102,909,707
JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpd1 glycerol-3-phosphate dehydrogenase 1 ISO MGI:MGI:3692960 (MGI:MGI:1927687|PMID:11147825) RGD PMID:11147825 MGI:MGI:1927687 NCBI chr 7:141,368,928...141,377,931
Ensembl chr 7:141,370,491...141,377,928
JBrowse link
NADH oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B ISO
IEA
(PMID:17576770)
GO_REF:0000107
RGD
Ensembl
PMID:17576770 GO_REF:0000107 NCBI chr 5:64,805,772...64,818,813
Ensembl chr 5:64,805,773...64,818,824
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 IDA
IBA
ISO
PMID:21873635
MGI:MGI:3692960 (MGI:MGI:1927687|PMID:11147825)
RGD PMID:11147825, PMID:9550546, PMID:21873635 MGI:MGI:1927687, RGD:1641824, RGD:13792537 NCBI chr 7:141,368,928...141,377,931
Ensembl chr 7:141,370,491...141,377,928
JBrowse link
G Gpd1l glycerol-3-phosphate dehydrogenase 1-like NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:122,957,570...122,987,236
Ensembl chr 8:122,954,948...122,987,191
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 IDA RGD PMID:29389585 RGD:25823193 NCBI chr19:38,422,210...38,437,103
Ensembl chr19:38,422,164...38,437,180
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) IDA
IMP
RGD PMID:19635791, PMID:19635791 RGD:7242950, RGD:7242950 NCBI chr15:34,216,735...34,224,357
Ensembl chr15:34,216,833...34,224,193
JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:MGI:4867601 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:MGI:4867601 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:MGI:3759354|PMID:17828264) RGD PMID:17828264 MGI:MGI:3759354 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      NADH metabolic process 31
        NADH oxidation + 5
        NADH regeneration + 8
        glucose catabolic process to lactate via pyruvate + 5
        sulphoglycolysis 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.