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ONTOLOGY REPORT - ANNOTATIONS


Term:glycosphingolipid metabolic process
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Accession:GO:0006687 term browser browse the term
Definition:The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide.
Synonyms:exact_synonym: glycosphingolipid metabolism



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glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 involved_in IMP (MGI:3718765|PMID:17488728) UniProt PMID:17488728 MGI:3718765 NCBI chr 2:25,428,599...25,448,544
Ensembl chr 2:25,428,703...25,448,540
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:3797995|PMID:18308723) MGI PMID:18308723 GO_REF:0000096 MGI:3797995 MGI:4417868 NCBI chr10:127,165,156...127,172,340
Ensembl chr10:127,165,225...127,172,330
JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IMP (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr 7:45,461,695...45,466,903
Ensembl chr 7:45,461,697...45,466,898
JBrowse link
G Crem cAMP responsive element modulator acts_upstream_of_or_within IMP (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr18:3,266,354...3,337,773
Ensembl chr18:3,266,048...3,337,748
JBrowse link
G Hexb hexosaminidase B acts_upstream_of_or_within IMP (MGI:78473|PMID:8789434) MGI PMID:8789434 MGI:78473 NCBI chr13:97,176,331...97,198,357
Ensembl chr13:97,176,331...97,198,357
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase acts_upstream_of_or_within IMP (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr 5:75,574,987...75,656,722
Ensembl chr 5:75,574,916...75,656,722
JBrowse link
G Map7 microtubule-associated protein 7 acts_upstream_of_or_within IMP (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr10:20,148,920...20,281,590
Ensembl chr10:20,148,471...20,281,590
JBrowse link
G St6galnac3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:153,198,274...153,725,133
Ensembl chr 3:153,198,266...153,725,174
JBrowse link
G St6galnac6 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:32,599,709...32,620,809
Ensembl chr 2:32,599,709...32,620,806
JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:67,565,689...68,122,882
Ensembl chr 2:67,565,871...68,122,689
JBrowse link
G B3galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:143,640,697...143,649,937
Ensembl chr 1:143,640,664...143,654,614
JBrowse link
G B4galt3 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:171,270,328...171,276,895
Ensembl chr 1:171,270,328...171,276,896
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IMP
ISO
IDA
(MGI:3826747|PMID:18815260)
(MGI:3696647|PMID:15658937)
UniProt
MGI
PMID:15658937 PMID:18815260 GO_REF:0000096 MGI:3696647 MGI:3826747 MGI:4417868 NCBI chr 8:111,345,138...111,393,821
Ensembl chr 8:111,345,135...111,393,824
JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:1355015|PMID:10727929)
GO_Central
MGI
PMID:10727929 PMID:21873635 MGI:1355015 MGI:6201960 NCBI chr11:3,983,636...3,999,328
Ensembl chr11:3,983,636...3,999,326
JBrowse link
G Ugt8a UDP galactosyltransferase 8A involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:125,865,272...125,938,682
Ensembl chr 3:125,865,271...125,938,619
JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase involved_in
acts_upstream_of_or_within
IMP
IBA
IDA
ISO
(MGI:78941|PMID:8769874)
(MGI:6201960|PMID:21873635)
(MGI:2183819|PMID:11371512)
UniProt
GO_Central
MGI
PMID:8769874 PMID:11371512 PMID:21873635 GO_REF:0000096 MGI:2183819 MGI:4834177 MGI:6201960 MGI:78941 NCBI chr12:98,202,287...98,259,459
Ensembl chr12:98,202,294...98,259,459
JBrowse link
G Psap prosaposin acts_upstream_of_or_within IMP (MGI:2183819|PMID:11371512) MGI PMID:11371512 MGI:2183819 NCBI chr10:60,277,628...60,302,600
Ensembl chr10:60,277,627...60,302,597
JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in IMP (MGI:6436415|PMID:9030544) UniProt PMID:9030544 MGI:6436415 NCBI chr11:3,983,636...3,999,328
Ensembl chr11:3,983,636...3,999,326
JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:33,949,912...33,951,488
Ensembl chr17:33,949,909...33,951,488
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
IGI
(MGI:1331265|PMID:10021458)
(MGI:6201960|PMID:21873635)
(MGI:83232|PMID:8855236)
MGI
GO_Central
UniProt
PMID:8855236 PMID:10021458 PMID:21873635 GO_REF:0000096 MGI:1331265 MGI:4417868 MGI:4834177 MGI:6201960 MGI:83232 NCBI chr10:127,165,156...127,172,340
Ensembl chr10:127,165,225...127,172,330
JBrowse link
G St6galnac1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 acts_upstream_of_or_within TAS (MGI:2153262|PMID:10788794) MGI PMID:10788794 MGI:2153262 NCBI chr11:116,765,025...116,775,507
Ensembl chr11:116,765,025...116,775,507
JBrowse link
G St6galnac3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:153,198,274...153,725,133
Ensembl chr 3:153,198,266...153,725,174
JBrowse link
G St6galnac4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:32,587,078...32,599,696
Ensembl chr 2:32,587,095...32,599,698
JBrowse link
G St6galnac5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:152,819,885...152,982,210
Ensembl chr 3:152,817,081...152,982,246
JBrowse link
G St6galnac6 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within
involved_in
IDA
IBA
(MGI:1354410|PMID:10702226)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:10702226 PMID:21873635 MGI:1354410 MGI:6201960 NCBI chr 2:32,599,709...32,620,809
Ensembl chr 2:32,599,709...32,620,806
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:73,939,119...74,013,727
Ensembl chr 7:73,939,119...74,013,690
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:64,254,359...64,276,146
Ensembl chr18:64,254,359...64,279,611
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:95,587,682...95,667,717
Ensembl chr 1:95,587,682...95,667,571
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IDA (MGI:2182536|PMID:11980897) BHF-UCL PMID:11980897 MGI:2182536 NCBI chr 2:13,651,018...13,794,734
Ensembl chr 2:13,651,021...13,794,064
JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr 2:167,298,444...167,349,178
Ensembl chr 2:167,298,444...167,349,183
JBrowse link
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr18:20,684,599...20,746,404
Ensembl chr18:20,684,599...20,746,404
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IDA
ISO
(MGI:65558|PMID:8144500) UniProt
MGI
PMID:8144500 GO_REF:0000096 MGI:4834177 MGI:65558 NCBI chr15:67,102,875...67,176,946
Ensembl chr15:67,102,875...67,176,830
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA
ISO
IMP
(MGI:65558|PMID:8144500)
(MGI:6467685|PMID:22735313)
UniProt
MGI
PMID:8144500 PMID:22735313 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:6467685 MGI:65558 NCBI chr 8:110,919,743...110,974,058
Ensembl chr 8:110,919,922...110,972,480
JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IMP (MGI:6467685|PMID:22735313) UniProt PMID:22735313 MGI:6467685 NCBI chr 4:117,932,152...118,134,972
Ensembl chr 4:117,932,154...118,134,914
JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a GM2 ganglioside activator protein involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:894862|PMID:9223328)
GO_Central
MGI
PMID:9223328 PMID:21873635 MGI:6201960 MGI:894862 NCBI chr11:55,097,985...55,113,029
Ensembl chr11:55,098,115...55,113,029
JBrowse link
G Hexa hexosaminidase A acts_upstream_of_or_within
involved_in
IMP
IBA
ISO
(MGI:69059|PMID:7937929), (MGI:894862|PMID:9223328)
(MGI:6201960|PMID:21873635)
(MGI:1271008|PMID:9645704), (MGI:78473|PMID:8789434)
MGI
GO_Central
PMID:7937929 PMID:8789434 PMID:9223328 PMID:9645704 PMID:21873635 GO_REF:0000096 MGI:1271008 MGI:4834177 MGI:6201960 MGI:69059 MGI:78473 MGI:894862 NCBI chr 9:59,539,540...59,565,109
Ensembl chr 9:59,539,540...59,565,109
JBrowse link
G Hexb hexosaminidase B involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:1331265|PMID:10021458), (MGI:2670850|PMID:12756243), (MGI:3041658|PMID:12657883), (MGI:3573807|PMID:15748167), (MGI:894862|PMID:9223328)
(MGI:76816|PMID:8566348)
(MGI:1271008|PMID:9645704), (MGI:78473|PMID:8789434)
MGI
GO_Central
PMID:8566348 PMID:8789434 PMID:9223328 PMID:9645704 PMID:10021458 More... GO_REF:0000096 MGI:1271008 MGI:1331265 MGI:2670850 MGI:3041658 MGI:3573807 MGI:4834177 MGI:6201960 MGI:76816 MGI:78473 MGI:894862 NCBI chr13:97,176,331...97,198,357
Ensembl chr13:97,176,331...97,198,357
JBrowse link
G Neu1 neuraminidase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:34,931,253...34,937,297
Ensembl chr17:34,931,253...34,935,953
JBrowse link
G Neu2 neuraminidase 2 involved_in ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:1354405|PMID:10713120)
MGI
GO_Central
UniProt
PMID:10713120 PMID:21873635 GO_REF:0000096 MGI:1354405 MGI:4834177 MGI:6201960 NCBI chr 1:87,574,027...87,597,845
Ensembl chr 1:87,509,889...87,597,845
JBrowse link
G Neu3 neuraminidase 3 involved_in IBA
ISO
IDA
(MGI:6201960|PMID:21873635)
(MGI:3040535|PMID:14970224), (MGI:3765376|PMID:17708748), (MGI:6478528|PMID:11696012)
GO_Central
MGI
UniProt
PMID:11696012 PMID:14970224 PMID:17708748 PMID:21873635 GO_REF:0000096 MGI:3040535 MGI:3765376 MGI:4834177 MGI:6201960 MGI:6478528 NCBI chr 7:99,811,434...99,828,457
Ensembl chr 7:99,811,439...99,828,417
JBrowse link
G Neu4 sialidase 4 involved_in ISO
IDA
IBA
(MGI:4361102|PMID:19506080)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:19506080 PMID:21873635 GO_REF:0000096 MGI:4361102 MGI:4834177 MGI:6201960 NCBI chr 1:94,020,493...94,028,334
Ensembl chr 1:94,020,451...94,028,334
JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 involved_in IMP (MGI:3718765|PMID:17488728) UniProt PMID:17488728 MGI:3718765 NCBI chr 2:25,428,599...25,448,544
Ensembl chr 2:25,428,703...25,448,540
JBrowse link
G Cln6 ceroid-lipofuscinosis, neuronal 6 involved_in ISO
ISS
(MGI:2157193|PMID:11727201) MGI
UniProt
PMID:11727201 GO_REF:0000096 MGI:2157193 MGI:4834177 NCBI chr 9:62,838,785...62,852,006
Ensembl chr 9:62,838,785...62,852,006
JBrowse link
G Gm2a GM2 ganglioside activator protein ISO RGD PMID:9770472 RGD:1598995 NCBI chr11:55,097,985...55,113,029
Ensembl chr11:55,098,115...55,113,029
JBrowse link
G Itgb8 integrin beta 8 acts_upstream_of_or_within IMP (MGI:3607039|PMID:16251442) MGI PMID:16251442 MGI:3607039 NCBI chr12:119,162,803...119,238,276
Ensembl chr12:119,158,022...119,238,802
JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase acts_upstream_of_or_within IMP
IDA
(MGI:5445364|PMID:22875802)
(MGI:3623723|PMID:16476743)
MGI PMID:16476743 PMID:22875802 MGI:3623723 MGI:5445364 NCBI chr15:83,226,722...83,251,729
Ensembl chr15:83,226,722...83,251,774
JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:110,919,743...110,974,058
Ensembl chr 8:110,919,922...110,972,480
JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 involved_in ISO (PMID:8855242) UniProt PMID:8855242 NCBI chr 2:28,479,354...28,506,030
Ensembl chr 2:28,496,891...28,505,415
JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in IMP (MGI:5285470|PMID:21628453) UniProt PMID:21628453 MGI:5285470 NCBI chr 8:111,345,138...111,393,821
Ensembl chr 8:111,345,135...111,393,824
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISO
IMP
IBA
(MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:10430909 PMID:16109770 PMID:21873635 PMID:22851168 PMID:23748427 GO_REF:0000096 MGI:2180222 MGI:3603060 MGI:4834177 MGI:5448789 MGI:5510915 MGI:6201960 NCBI chr 4:59,189,507...59,222,833
Ensembl chr 4:59,189,257...59,222,833
JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosidase, beta, acid involved_in ISO
IBA
IDA
IMP
(MGI:6201960|PMID:21873635)
(MGI:6271235|PMID:24211208)
(MGI:5141165|PMID:21700325), (MGI:5501380|PMID:23707074)
MGI
GO_Central
UniProt
ParkinsonsUK-UCL
PMID:21700325 PMID:21873635 PMID:23707074 PMID:24211208 GO_REF:0000096 MGI:4834177 MGI:5141165 MGI:5501380 MGI:6201960 MGI:6271235 NCBI chr 3:89,202,905...89,208,873
Ensembl chr 3:89,202,928...89,208,966
JBrowse link
G Gba2 glucosidase beta 2 involved_in IMP
ISO
IDA
(MGI:3690511|PMID:17080196)
(MGI:5484792|PMID:23250757)
UniProt
MGI
PMID:17080196 PMID:23250757 GO_REF:0000096 MGI:3690511 MGI:4834177 MGI:5484792 NCBI chr 4:43,566,928...43,578,886
Ensembl chr 4:43,566,928...43,578,873
JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosidase, beta, acid acts_upstream_of_or_within IMP (MGI:3762988|PMID:17954912), (MGI:3795074|PMID:18346921) MGI PMID:17954912 PMID:18346921 MGI:3762988 MGI:3795074 NCBI chr 3:89,202,905...89,208,873
Ensembl chr 3:89,202,928...89,208,966
JBrowse link
G Psap prosaposin acts_upstream_of_or_within IMP (MGI:3711591|PMID:17353235) MGI PMID:17353235 MGI:3711591 NCBI chr10:60,277,628...60,302,600
Ensembl chr10:60,277,627...60,302,597
JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) acts_upstream_of_or_within
involved_in
IGI
ISO
(MGI:5445364|PMID:22875802) MGI
RGD
PMID:10854427 PMID:22875802 GO_REF:0000008 GO_REF:0000096 MGI:2154458 MGI:4417868 MGI:5445364 RGD:1299594 NCBI chr 4:128,759,258...128,769,298
Ensembl chr 4:128,755,364...128,769,298
JBrowse link
G A4galt alpha 1,4-galactosyltransferase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr15:83,226,722...83,251,729
Ensembl chr15:83,226,722...83,251,774
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:127,165,156...127,172,340
Ensembl chr10:127,165,225...127,172,330
JBrowse link
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:9593693 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:70807 NCBI chr18:20,684,599...20,746,404
Ensembl chr18:20,684,599...20,746,404
JBrowse link
G St6galnac5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IDA (MGI:1346847|PMID:10521438) BHF-UCL PMID:10521438 MGI:1346847 NCBI chr 3:152,819,885...152,982,210
Ensembl chr 3:152,817,081...152,982,246
JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:77,185,847...77,255,450
Ensembl chr18:77,185,839...77,258,771
JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:134,588,169...134,601,005
Ensembl chr  X:134,588,149...134,601,125
JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase, alpha involved_in
acts_upstream_of_or_within
IBA
IMP
IDA
(MGI:6201960|PMID:21873635)
(MGI:1859538|PMID:10841515), (MGI:2155538|PMID:11752062), (MGI:86774|PMID:9122231)
(MGI:1860035|PMID:10840053), (MGI:3525994|PMID:15629890)
GO_Central
MGI
PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 More... MGI:1859538 MGI:1860035 MGI:2155538 MGI:3525994 MGI:6201960 MGI:86774 NCBI chr  X:134,588,169...134,601,005
Ensembl chr  X:134,588,149...134,601,125
JBrowse link
G Naga N-acetyl galactosaminidase, alpha involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr15:82,329,532...82,338,884
Ensembl chr15:82,329,532...82,338,925
JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St6galnac3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:153,198,274...153,725,133
Ensembl chr 3:153,198,266...153,725,174
JBrowse link
G St6galnac6 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:32,599,709...32,620,809
Ensembl chr 2:32,599,709...32,620,806
JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:20,684,599...20,746,404
Ensembl chr18:20,684,599...20,746,404
JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C, delta involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:30,595,353...30,626,414
Ensembl chr14:30,595,354...30,626,210
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28611
    metabolic process 11246
      organic substance metabolic process 10838
        organonitrogen compound metabolic process 6178
          sphingolipid metabolic process 141
            glycosphingolipid metabolic process 48
              GSI anchor metabolic process + 0
              ganglioside metabolic process + 26
              globoside metabolic process + 3
              glycosphingolipid biosynthetic process + 26
              glycosphingolipid catabolic process + 14
              glycosylceramide metabolic process + 16
              lactosylceramide metabolic process + 1
              mannosyl-inositol phosphorylceramide metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 28611
    metabolic process 11246
      primary metabolic process 9905
        lipid metabolic process 1387
          cellular lipid metabolic process 1030
            membrane lipid metabolic process 185
              sphingolipid metabolic process 141
                glycosphingolipid metabolic process 48
                  GSI anchor metabolic process + 0
                  ganglioside metabolic process + 26
                  globoside metabolic process + 3
                  glycosphingolipid biosynthetic process + 26
                  glycosphingolipid catabolic process + 14
                  glycosylceramide metabolic process + 16
                  lactosylceramide metabolic process + 1
                  mannosyl-inositol phosphorylceramide metabolic process + 0
paths to the root