Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:glycosphingolipid metabolic process
go back to main search page
Accession:GO:0006687 term browser browse the term
Definition:The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide.
Synonyms:exact_synonym: glycosphingolipid metabolism


show annotations for term's descendants           Sort by:
glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:137,007,234...137,028,922
Ensembl chr 9:137,007,234...137,028,915 		JBrowse link
G B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 3:161,083,883...161,105,349
Ensembl chr 3:161,083,883...161,105,411 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
TAS
IEA		 (MGI:3797995|PMID:18308723)
(PMID:1601877)		 MGI
PINC
Ensembl		 PMID:1601877 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr12:57,623,409...57,633,201
Ensembl chr12:57,623,409...57,633,239 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3797995|PMID:18308723) MGI
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798 		JBrowse link
G CERK ceramide kinase involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr22:46,684,410...46,738,252
Ensembl chr22:46,684,410...46,738,252 		JBrowse link
G CPTP ceramide-1-phosphate transfer protein involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 1:1,324,802...1,328,896
Ensembl chr 1:1,324,756...1,328,896 		JBrowse link
G CREM cAMP responsive element modulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3797995|PMID:18308723) MGI
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr10:35,126,846...35,212,958
Ensembl chr10:35,126,791...35,212,958 		JBrowse link
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr17:79,730,943...79,742,219
Ensembl chr17:79,730,943...79,742,219 		JBrowse link
G GALC galactosylceramidase involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr14:87,933,014...87,993,665
Ensembl chr14:87,837,820...87,993,665 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 9:35,736,866...35,749,228
Ensembl chr 9:35,736,866...35,749,228 		JBrowse link
G GBA3 glucosylceramidase beta 3 (gene/pseudogene) involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 4:22,692,937...22,819,569
Ensembl chr 4:22,692,914...22,819,575 		JBrowse link
G GLB1 galactosidase beta 1 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 3:32,961,108...33,097,146
Ensembl chr 3:32,996,609...33,097,202 		JBrowse link
G GLTP glycolipid transfer protein involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr12:109,850,945...109,880,541
Ensembl chr12:109,850,945...109,880,541 		JBrowse link
G GM2A ganglioside GM2 activator involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 5:151,253,185...151,270,440
Ensembl chr 5:151,212,150...151,270,440 		JBrowse link
G HEXB hexosaminidase subunit beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78473|PMID:8789434) MGI
Ensembl		 PMID:8789434 GO_REF:0000107 MGI:78473 NCBI chr 5:74,640,023...74,721,288
Ensembl chr 5:74,640,023...74,722,647 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3797995|PMID:18308723) MGI
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,267...54,740,783 		JBrowse link
G MAP7 microtubule associated protein 7 acts_upstream_of_or_within ISO (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr 6:136,342,734...136,550,422
Ensembl chr 6:136,342,281...136,550,819 		JBrowse link
G NEU2 neuraminidase 2 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 2:233,032,672...233,035,057
Ensembl chr 2:233,032,672...233,035,057 		JBrowse link
G NEU3 neuraminidase 3 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr11:74,980,515...75,020,676
Ensembl chr11:74,988,279...75,018,893 		JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr11:6,390,474...6,394,996
Ensembl chr11:6,390,440...6,394,998 		JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IDA (PMID:17123352) BHF-UCL PMID:17123352 NCBI chr 1:76,074,746...76,637,339
Ensembl chr 1:76,074,746...76,634,603 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IDA (PMID:17123352) BHF-UCL PMID:17123352 NCBI chr 9:127,885,321...127,906,616
Ensembl chr 9:127,885,321...127,905,408 		JBrowse link
G SUMF1 sulfatase modifying factor 1 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 3:4,034,486...4,467,269
Ensembl chr 3:3,700,814...4,467,273 		JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 9:111,896,814...111,935,369
Ensembl chr 9:111,896,814...111,935,369 		JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in TAS Reactome Reactome:R-HSA-1660662 NCBI chr 4:114,598,402...114,678,225
Ensembl chr 4:114,598,770...114,678,225 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT1 beta-1,3-galactosyltransferase 1 involved_in IDA (PMID:9582303) BHF-UCL PMID:9582303 NCBI chr 2:167,293,001...167,874,045
Ensembl chr 2:167,293,001...167,874,045 		JBrowse link
G B3GALT2 beta-1,3-galactosyltransferase 2 involved_in IDA (PMID:9582303) BHF-UCL PMID:9582303 NCBI chr 1:193,178,730...193,186,613
Ensembl chr 1:193,178,730...193,186,613 		JBrowse link
G B4GALT3 beta-1,4-galactosyltransferase 3 involved_in IDA
IBA		 (PMID:9405390)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:9405390 PMID:21873635 NCBI chr 1:161,171,310...161,177,968
Ensembl chr 1:161,171,310...161,177,968 		JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr16:74,712,969...74,774,820
Ensembl chr16:74,712,955...74,774,831 		JBrowse link
G GAL3ST1 galactose-3-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:1355015|PMID:10727929)
(PMID:21873635)		 MGI
Ensembl
GO_Central		 PMID:10727929 PMID:21873635 GO_REF:0000107 MGI:1355015 NCBI chr22:30,554,635...30,574,665
Ensembl chr22:30,554,635...30,574,665 		JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in IEA
IBA
ISS		 (PMID:21873635) Ensembl
GO_Central
UniProt		 PMID:21873635 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:114,598,402...114,678,225
Ensembl chr 4:114,598,770...114,678,225 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALC galactosylceramidase acts_upstream_of_or_within
involved_in		 ISO
IBA
ISS
IDA
IEA		 (MGI:2183819|PMID:11371512)
(PMID:21873635)
(PMID:8399327)		 MGI
GO_Central
UniProt
InterPro
Ensembl		 PMID:8399327 PMID:11371512 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:2183819 NCBI chr14:87,933,014...87,993,665
Ensembl chr14:87,837,820...87,993,665 		JBrowse link
G GBA3 glucosylceramidase beta 3 (gene/pseudogene) involved_in IDA (PMID:17595169) UniProt PMID:17595169 NCBI chr 4:22,692,937...22,819,569
Ensembl chr 4:22,692,914...22,819,575 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:2183819|PMID:11371512) MGI PMID:11371512 MGI:2183819 NCBI chr10:71,816,298...71,851,251
Ensembl chr10:71,816,298...71,851,251 		JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAL3ST1 galactose-3-O-sulfotransferase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr22:30,554,635...30,574,665
Ensembl chr22:30,554,635...30,574,665 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT4 beta-1,3-galactosyltransferase 4 involved_in IDA (PMID:9582303) BHF-UCL PMID:9582303 NCBI chr 6:33,277,123...33,278,825
Ensembl chr 6:33,277,123...33,284,832 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IDA
IMP
IBA
IEA		 (MGI:1331265|PMID:10021458)
(PMID:7487055), (PMID:7890749)
(PMID:1601877)
(PMID:21873635)		 MGI
UniProt
GO_Central
Ensembl		 PMID:1601877 PMID:7487055 PMID:7890749 PMID:10021458 PMID:21873635 GO_REF:0000107 MGI:1331265 NCBI chr12:57,623,409...57,633,201
Ensembl chr12:57,623,409...57,633,239 		JBrowse link
G ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 involved_in IC (PMID:9822625) UniProt PMID:9822625 NCBI chr 2:85,837,120...85,889,034
Ensembl chr 2:85,837,120...85,905,199 		JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,074,746...76,637,339
Ensembl chr 1:76,074,746...76,634,603 		JBrowse link
G ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:127,907,886...127,917,041
Ensembl chr 9:127,907,886...127,917,041 		JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,867,480...77,067,546
Ensembl chr 1:76,867,480...77,067,546 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within
involved_in		 ISO
IEA
ISS
IBA		 (MGI:1354410|PMID:10702226)
(PMID:21873635)		 MGI
Ensembl
BHF-UCL
GO_Central		 PMID:10702226 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1354410 NCBI chr 9:127,885,321...127,906,616
Ensembl chr 9:127,885,321...127,905,408 		JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IDA (PMID:10766765) BHF-UCL PMID:10766765 NCBI chr15:92,393,881...92,468,728
Ensembl chr15:92,393,881...92,468,728 		JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IDA
IEA		 (PMID:10766765) BHF-UCL
Ensembl		 PMID:10766765 GO_REF:0000107 NCBI chr18:57,352,557...57,368,931
Ensembl chr18:57,352,557...57,371,731 		JBrowse link
G ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IDA (PMID:10766765) BHF-UCL PMID:10766765 NCBI chr 5:100,806,933...100,903,282
Ensembl chr 5:100,806,933...100,903,282 		JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA
ISS		 (PMID:11980897) Ensembl
BHF-UCL		 PMID:11980897 GO_REF:0000107 NCBI chr10:17,315,421...17,454,595
Ensembl chr10:17,315,421...17,454,595 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:49,632,945...49,713,878
Ensembl chr20:49,632,945...49,713,878 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr18:31,622,246...31,724,641
Ensembl chr18:31,622,246...31,685,836 		JBrowse link
G C20orf173 chromosome 20 open reading frame 173 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:35,520,741...35,529,652
Ensembl chr20:35,523,186...35,529,652 		JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IDA
IBA
IEA		 (PMID:8027041)
(PMID:21873635)		 UniProt
GO_Central
Ensembl		 PMID:8027041 PMID:21873635 GO_REF:0000107 NCBI chr 8:133,454,848...133,571,887
Ensembl chr 8:133,454,848...133,571,926 		JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA
IBA
IDA		 (PMID:21873635)
(PMID:8920913)		 Ensembl
GO_Central
UniProt		 PMID:8920913 PMID:21873635 GO_REF:0000107 NCBI chr16:70,375,977...70,439,100
Ensembl chr16:70,375,977...70,439,237 		JBrowse link
G ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:43,707,536...43,931,159
Ensembl chr 1:43,705,824...43,931,165 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GM2A ganglioside GM2 activator acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:894862|PMID:9223328)
(PMID:21873635)		 MGI
Ensembl
GO_Central
InterPro		 PMID:9223328 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:894862 NCBI chr 5:151,253,185...151,270,440
Ensembl chr 5:151,212,150...151,270,440 		JBrowse link
G HEXA hexosaminidase subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA
IDA
IBA		 (MGI:69059|PMID:7937929), (MGI:894862|PMID:9223328)
(PMID:8123671), (PMID:8672428), (PMID:9694901)
(PMID:21873635)
(MGI:1271008|PMID:9645704), (MGI:78473|PMID:8789434)		 MGI
Ensembl
UniProt
GO_Central		 PMID:7937929 PMID:8123671 PMID:8672428 PMID:8789434 PMID:9223328 More... GO_REF:0000107 MGI:1271008 MGI:69059 MGI:78473 MGI:894862 NCBI chr15:72,340,924...72,376,014
Ensembl chr15:72,340,924...72,376,420 		JBrowse link
G HEXB hexosaminidase subunit beta acts_upstream_of_or_within
involved_in		 ISO
IBA
IDA
IEA		 (MGI:1271008|PMID:9645704), (MGI:78473|PMID:8789434)
(PMID:21873635)
(PMID:8123671), (PMID:8672428)
(MGI:1331265|PMID:10021458), (MGI:2670850|PMID:12756243), (MGI:3041658|PMID:12657883), (MGI:3573807|PMID:15748167), (MGI:894862|PMID:9223328)
(MGI:76816|PMID:8566348)		 MGI
GO_Central
UniProt
Ensembl		 PMID:8123671 PMID:8566348 PMID:8672428 PMID:8789434 PMID:9223328 More... GO_REF:0000107 MGI:1271008 MGI:1331265 MGI:2670850 MGI:3041658 MGI:3573807 MGI:76816 MGI:78473 MGI:894862 NCBI chr 5:74,640,023...74,721,288
Ensembl chr 5:74,640,023...74,722,647 		JBrowse link
G NEU1 neuraminidase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:31,857,659...31,862,821
Ensembl chr 6:31,857,659...31,862,905 		JBrowse link
G NEU2 neuraminidase 2 involved_in IDA
IBA		 (PMID:14613940), (PMID:22228546)
(PMID:21873635)		 UniProt
GO_Central		 PMID:14613940 PMID:21873635 PMID:22228546 NCBI chr 2:233,032,672...233,035,057
Ensembl chr 2:233,032,672...233,035,057 		JBrowse link
G NEU3 neuraminidase 3 involved_in IDA
IBA
IEA		 (PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392)
(PMID:21873635)		 UniProt
GO_Central
Ensembl		 PMID:10861246 PMID:11298736 PMID:15847605 PMID:17334392 PMID:21873635 GO_REF:0000107 NCBI chr11:74,980,515...75,020,676
Ensembl chr11:74,988,279...75,018,893 		JBrowse link
G NEU4 neuraminidase 4 involved_in IEA
IDA
IBA		 (PMID:15213228), (PMID:15847605)
(PMID:21873635)		 Ensembl
UniProt
GO_Central		 PMID:15213228 PMID:15847605 PMID:21873635 GO_REF:0000107 NCBI chr 2:241,809,193...241,817,413
Ensembl chr 2:241,809,065...241,817,413 		JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:137,007,234...137,028,922
Ensembl chr 9:137,007,234...137,028,915 		JBrowse link
G CLN6 CLN6 transmembrane ER protein involved_in IMP (PMID:16857350) UniProt PMID:16857350 NCBI chr15:68,206,992...68,257,211
Ensembl chr15:68,206,992...68,257,211 		JBrowse link
G GM2A ganglioside GM2 activator involved_in ISO
IEA		 RGD
Ensembl		 PMID:9770472 GO_REF:0000107 RGD:1598995 NCBI chr 5:151,253,185...151,270,440
Ensembl chr 5:151,212,150...151,270,440 		JBrowse link
G ITGB8 integrin subunit beta 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3607039|PMID:16251442) MGI
Ensembl		 PMID:16251442 GO_REF:0000107 MGI:3607039 NCBI chr 7:20,329,766...20,415,754
Ensembl chr 7:20,330,702...20,415,754 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4950812|PMID:21408219) MGI
Ensembl		 PMID:21408219 GO_REF:0000107 MGI:4950812 NCBI chr17:42,536,241...42,544,449
Ensembl chr17:42,536,241...42,544,449 		JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4GALT alpha 1,4-galactosyltransferase (P blood group) acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5445364|PMID:22875802)
(MGI:3623723|PMID:16476743)		 MGI
Ensembl		 PMID:16476743 PMID:22875802 GO_REF:0000107 MGI:3623723 MGI:5445364 NCBI chr22:42,692,121...42,721,301
Ensembl chr22:42,692,121...42,721,298 		JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA (PMID:12716912) UniProt PMID:12716912 NCBI chr16:70,375,977...70,439,100
Ensembl chr16:70,375,977...70,439,237 		JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) involved_in ISO (PMID:8855242) UniProt PMID:8855242 NCBI chr 9:133,152,948...133,163,914
Ensembl chr 9:133,152,948...133,163,933 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FA2H fatty acid 2-hydroxylase involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:74,712,969...74,774,820
Ensembl chr16:74,712,955...74,774,831 		JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in IEA
IDA
IBA		 (PMID:8643456)
(PMID:21873635)		 Ensembl
UniProt
GO_Central		 PMID:8643456 PMID:21873635 GO_REF:0000107 NCBI chr 9:111,896,814...111,935,369
Ensembl chr 9:111,896,814...111,935,369 		JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 involved_in IDA
IBA
IMP
IEA		 (PMID:16293621), (PMID:24211208), (PMID:9201993)
(PMID:21873635)
(PMID:19279011), (PMID:21700325), (PMID:24022302)		 UniProt
GO_Central
ParkinsonsUK-UCL
Ensembl		 PMID:9201993 PMID:16293621 PMID:19279011 PMID:21700325 PMID:21873635 More... GO_REF:0000107 NCBI chr 1:155,234,452...155,244,627
Ensembl chr 1:155,234,452...155,244,699 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IMP
IDA
IEA		 (PMID:30308956)
(PMID:17080196)		 UniProt
InterPro
Ensembl		 PMID:17080196 PMID:30308956 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:35,736,866...35,749,228
Ensembl chr 9:35,736,866...35,749,228 		JBrowse link
G GBA3 glucosylceramidase beta 3 (gene/pseudogene) NOT|involved_in IDA
IMP		 (PMID:20728381)
(PMID:26724485)
(PMID:17595169)		 UniProt PMID:17595169 PMID:20728381 PMID:26724485 NCBI chr 4:22,692,937...22,819,569
Ensembl chr 4:22,692,914...22,819,575 		JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3762988|PMID:17954912), (MGI:3795074|PMID:18346921) MGI
Ensembl		 PMID:17954912 PMID:18346921 GO_REF:0000107 MGI:3762988 MGI:3795074 NCBI chr 1:155,234,452...155,244,627
Ensembl chr 1:155,234,452...155,244,699 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:3711591|PMID:17353235) MGI PMID:17353235 MGI:3711591 NCBI chr10:71,816,298...71,851,251
Ensembl chr10:71,816,298...71,851,251 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3GALT2 alpha 1,3-galactosyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:5445364|PMID:22875802)
PMID:10854427		 RGD
Ensembl
MGI		 PMID:10854427 PMID:22875802 GO_REF:0000107 MGI:5445364 RGD:1299594 NCBI chr 1:33,306,766...33,321,098
Ensembl chr 1:33,306,766...33,321,098 		JBrowse link
G A4GALT alpha 1,4-galactosyltransferase (P blood group) involved_in NAS (PMID:10748143) UniProt PMID:10748143 NCBI chr22:42,692,121...42,721,301
Ensembl chr22:42,692,121...42,721,298 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr12:57,623,409...57,633,201
Ensembl chr12:57,623,409...57,633,239 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in ISO
IEA
IBA		 (PMID:21873635) RGD
Ensembl
GO_Central		 PMID:9593693 PMID:21873635 GO_REF:0000107 RGD:70807 NCBI chr18:31,622,246...31,724,641
Ensembl chr18:31,622,246...31,685,836 		JBrowse link
G FUT4 fucosyltransferase 4 involved_in IDA (PMID:29593094) UniProt PMID:29593094 NCBI chr11:94,543,921...94,549,895
Ensembl chr11:94,543,921...94,549,895 		JBrowse link
G FUT6 fucosyltransferase 6 involved_in IDA (PMID:29593094) UniProt PMID:29593094 NCBI chr19:5,830,408...5,839,702
Ensembl chr19:5,830,408...5,839,722 		JBrowse link
G FUT9 fucosyltransferase 9 involved_in IDA (PMID:29593094) UniProt PMID:29593094 NCBI chr 6:96,015,974...96,215,612
Ensembl chr 6:96,015,974...96,215,612 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in TAS (PMID:9892679) UniProt PMID:9892679 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841 		JBrowse link
G ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 involved_in TAS (PMID:10092602) PINC PMID:10092602 NCBI chr 2:85,837,120...85,889,034
Ensembl chr 2:85,837,120...85,905,199 		JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:76,867,480...77,067,546
Ensembl chr 1:76,867,480...77,067,546 		JBrowse link
G ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 involved_in TAS (PMID:8195250) PINC PMID:8195250 NCBI chr12:22,193,391...22,334,707
Ensembl chr12:22,063,773...22,437,041 		JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in TAS (PMID:9073076) PINC PMID:9073076 NCBI chr18:57,352,557...57,368,931
Ensembl chr18:57,352,557...57,371,731 		JBrowse link
G ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISS
IEA
TAS		 (PMID:9199191) UniProt
Ensembl
PINC		 PMID:9199191 GO_REF:0000024 GO_REF:0000107 NCBI chr18:46,667,821...46,757,053
Ensembl chr18:46,667,821...46,759,257 		JBrowse link
G TM9SF2 transmembrane 9 superfamily member 2 involved_in IMP (PMID:30660999) UniProt PMID:30660999 NCBI chr13:99,501,472...99,564,048
Ensembl chr13:99,446,311...99,564,048 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLA galactosidase alpha involved_in IMP
TAS
IDA		 (PMID:10838196)
(PMID:2160973)
(PMID:8804427)		 UniProt PMID:2160973 PMID:8804427 PMID:10838196 NCBI chr  X:101,397,803...101,407,925
Ensembl chr  X:101,393,273...101,408,012 		JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA3 glucosylceramidase beta 3 (gene/pseudogene) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:22,692,937...22,819,569
Ensembl chr 4:22,692,914...22,819,575 		JBrowse link
G GLA galactosidase alpha acts_upstream_of_or_within
involved_in		 ISO
ISS		 (MGI:1860035|PMID:10840053), (MGI:3525994|PMID:15629890)
(MGI:1859538|PMID:10841515), (MGI:2155538|PMID:11752062), (MGI:86774|PMID:9122231)		 MGI
UniProt		 PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 GO_REF:0000024 MGI:1859538 MGI:1860035 MGI:2155538 MGI:3525994 MGI:86774 NCBI chr  X:101,397,803...101,407,925
Ensembl chr  X:101,393,273...101,408,012 		JBrowse link
G LCT lactase involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:135,787,850...135,837,184
Ensembl chr 2:135,787,850...135,837,184 		JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IDA (PMID:17123352) BHF-UCL PMID:17123352 NCBI chr 1:76,074,746...76,637,339
Ensembl chr 1:76,074,746...76,634,603 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IDA (PMID:17123352) BHF-UCL PMID:17123352 NCBI chr 9:127,885,321...127,906,616
Ensembl chr 9:127,885,321...127,905,408 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT4 beta-1,4-galactosyltransferase 4 involved_in IDA (PMID:9792633) UniProt PMID:9792633 NCBI chr 3:119,211,742...119,240,878
Ensembl chr 3:119,211,732...119,240,946 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IDA (PMID:10320813) BHF-UCL PMID:10320813 NCBI chr18:31,622,246...31,724,641
Ensembl chr18:31,622,246...31,685,836 		JBrowse link
negative regulation of glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in NAS (PMID:11165240) UniProt PMID:11165240 NCBI chr 5:40,759,389...40,798,374
Ensembl chr 5:40,759,389...40,798,374 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKCD protein kinase C delta involved_in IMP (PMID:19279011) BHF-UCL PMID:19279011 NCBI chr 3:53,161,209...53,192,717
Ensembl chr 3:53,156,009...53,192,717 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19565
    metabolic process 12598
      organic substance metabolic process 11854
        organonitrogen compound metabolic process 5598
          sphingolipid metabolic process 168
            glycosphingolipid metabolic process 67
              GSI anchor metabolic process + 0
              ganglioside metabolic process + 28
              globoside metabolic process + 3
              glycosphingolipid biosynthetic process + 35
              glycosphingolipid catabolic process + 15
              glycosylceramide metabolic process + 18
              lactosylceramide metabolic process + 2
              mannosyl-inositol phosphorylceramide metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19565
    metabolic process 12598
      primary metabolic process 10625
        lipid metabolic process 1491
          cellular lipid metabolic process 1081
            membrane lipid metabolic process 201
              sphingolipid metabolic process 168
                glycosphingolipid metabolic process 67
                  GSI anchor metabolic process + 0
                  ganglioside metabolic process + 28
                  globoside metabolic process + 3
                  glycosphingolipid biosynthetic process + 35
                  glycosphingolipid catabolic process + 15
                  glycosylceramide metabolic process + 18
                  lactosylceramide metabolic process + 2
                  mannosyl-inositol phosphorylceramide metabolic process + 0
paths to the root