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ONTOLOGY REPORT - ANNOTATIONS

Term:glycosphingolipid metabolic process
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Accession:GO:0006687 term browser browse the term
Definition:The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide.
Synonyms:exact_synonym: glycosphingolipid metabolism


show annotations for term's descendants           Sort by:
glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3718765|PMID:17488728)		 UniProt
RGD		 PMID:17488728 GO_REF:0000024 MGI:3718765 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in
acts_upstream_of_or_within		 IDA
ISO		 PMID:3140234
MGI:2158349 (MGI:3797995|PMID:18308723)		 RGD PMID:18308723 PMID:3140234 MGI:3797995, RGD:21201261 NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (MGI:3797995|PMID:18308723) RGD PMID:18308723 MGI:3797995 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Crem cAMP responsive element modulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2158921 (MGI:3797995|PMID:18308723)
GO_REF:0000107		 RGD
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989 		JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within ISO MGI:2429701 (MGI:78473|PMID:8789434) RGD PMID:8789434 MGI:78473 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1856232 (MGI:3797995|PMID:18308723) RGD PMID:18308723 MGI:3797995 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Map7 microtubule-associated protein 7 acts_upstream_of_or_within ISO MGI:1889849 (MGI:3797995|PMID:18308723) RGD PMID:18308723 MGI:3797995 NCBI chr 1:14,910,433...15,037,574
Ensembl chr 1:14,910,551...15,037,574 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 Beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr 3:52,253,413...52,826,508
Ensembl chr 3:52,253,618...52,825,313 		JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr13:55,389,406...55,398,419
Ensembl chr13:55,389,406...55,398,419 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(PMID:9405390)		 Ensembl
RGD		 PMID:9405390 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:83,691,378...83,697,448
Ensembl chr13:83,691,446...83,697,448 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
IMP
IEA		 GO_REF:0000024
(MGI:3696647|PMID:15658937), (MGI:3826747|PMID:18815260)
PMID:17901466
GO_REF:0000041		 UniProt
RGD		 PMID:15658937 PMID:18815260 PMID:17901466 GO_REF:0000024 GO_REF:0000041 MGI:3696647 MGI:3826747, RGD:13825191 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:1355015|PMID:10727929)		 RGD PMID:10727929 PMID:21873635 MGI:1355015, RGD:13792537 NCBI chr14:78,868,049...78,886,402
Ensembl chr14:78,870,793...78,886,388 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IDA
IBA
IEA		 PMID:8713090
PMID:21873635
GO_REF:0000041		 UniProt PMID:8713090 PMID:21873635 GO_REF:0000041, RGD:39458006, RGD:13792537 NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:78941|PMID:8769874)
MGI:1856218 (MGI:2183819|PMID:11371512)
(PMID:8399327)		 RGD PMID:8399327 PMID:8769874 PMID:11371512 PMID:21873635 MGI:2183819 MGI:78941, RGD:13792537 NCBI chr 6:117,452,888...117,522,281
Ensembl chr 6:117,452,895...117,515,830 		JBrowse link
G Gba3 glucosylceramidase beta 3 involved_in ISO (PMID:17595169) RGD PMID:17595169 NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:2183897 (MGI:2183819|PMID:11371512) RGD PMID:11371512 MGI:2183819 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498 		JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in ISO (MGI:6436415|PMID:9030544) RGD PMID:9030544 MGI:6436415 NCBI chr14:78,868,049...78,886,402
Ensembl chr14:78,870,793...78,886,388 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 Beta-1,3-galactosyltransferase 4 involved_in ISO
IEA		 (PMID:9582303)
GO_REF:0000107		 RGD
Ensembl		 PMID:9582303 GO_REF:0000107 NCBI chr20:4,936,089...4,937,664
Ensembl chr20:4,931,768...4,938,315 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO
IDA
ISS		 PMID:21873635
GO_REF:0000107
(MGI:83232|PMID:8855236)
MGI:2158349|MGI:96074 (MGI:1331265|PMID:10021458)
PMID:3140234
(PMID:1601877), (PMID:7487055), (PMID:7890749)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458 More... GO_REF:0000024 GO_REF:0000107 MGI:1331265 MGI:83232, RGD:13792537, RGD:21201261 NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190 		JBrowse link
G Rps18 ribosomal protein S18 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,931,427...4,935,538
Ensembl chr10:101,204,500...101,205,146
Ensembl chr20:101,204,500...101,205,146 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133 		JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:15,872,230...15,885,250
Ensembl chr 3:15,872,532...15,885,243 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:241,741,933...241,911,214
Ensembl chr 2:241,742,688...241,911,208 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:1354410|PMID:10702226)
PMID:21873635		 RGD PMID:10702226 PMID:21873635 MGI:1354410, RGD:13792537 NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr18:57,754,349...57,760,839
Ensembl chr18:57,754,347...57,760,839 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 9:95,990,131...96,084,661
Ensembl chr 9:95,993,503...96,084,653 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:6196231 NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6196231|PMID:30114188)		 UniProt
RGD		 PMID:30114188 GO_REF:0000024 MGI:6196231 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247 		JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO
IBA		 (PMID:8027041)
PMID:21873635
(MGI:65558|PMID:8144500)		 RGD PMID:8027041 PMID:8144500 PMID:21873635 MGI:65558, RGD:13792537 NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA
IBA
IEA
ISO		 PMID:8144500
PMID:21873635
GO_REF:0000107
(MGI:6467685|PMID:22735313), (MGI:65558|PMID:8144500)
(PMID:8920913)		 Ensembl
RGD		 PMID:8144500 PMID:8920913 PMID:22735313 PMID:8144500 PMID:21873635 GO_REF:0000107 MGI:6467685 MGI:65558, RGD:68307, RGD:13792537 NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869 		JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6467685|PMID:22735313)		 Ensembl
RGD		 PMID:22735313 GO_REF:0000107 MGI:6467685 NCBI chr 5:131,470,348...131,670,794
Ensembl chr 5:131,470,348...131,670,810 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a ganglioside GM2 activator acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1861930 (MGI:894862|PMID:9223328)
PMID:21873635		 RGD PMID:9223328 PMID:21873635 MGI:894862, RGD:13792537 NCBI chr10:39,219,221...39,231,756
Ensembl chr10:39,219,243...39,231,757 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
(PMID:8123671), (PMID:8672428), (PMID:9694901)
MGI:1857181|MGI:2429698 (MGI:1271008|PMID:9645704), (MGI:69059|PMID:7937929), (MGI:78473|PMID:8789434), (MGI:894862|PMID:9223328)
PMID:21873635		 UniProt
RGD		 PMID:7937929 PMID:8123671 PMID:8672428 PMID:8789434 PMID:9223328 More... GO_REF:0000024 MGI:1271008 MGI:69059 MGI:78473 MGI:894862, RGD:13792537 NCBI chr 8:59,936,526...59,961,654
Ensembl chr 8:59,936,660...59,962,013 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 ISS
IBA
ISO
IEA		 GO_REF:0000024
PMID:21873635
MGI:1857438|MGI:2429701 (MGI:1271008|PMID:9645704), (MGI:1331265|PMID:10021458), (MGI:2670850|PMID:12756243), (MGI:3041658|PMID:12657883), (MGI:3573807|PMID:15748167), (MGI:76816|PMID:8566348), (MGI:78473|PMID:8789434), (MGI:894862|PMID:9223328)
(PMID:8123671), (PMID:8672428)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:8123671 PMID:8566348 PMID:8672428 PMID:8789434 PMID:9223328 More... GO_REF:0000024 GO_REF:0000107 MGI:1271008 MGI:1331265 MGI:2670850 MGI:3041658 MGI:3573807 MGI:76816 MGI:78473 MGI:894862, RGD:13792537 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Neu1 neuraminidase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,897,480...3,901,745
Ensembl chr20:3,897,480...3,901,745 		JBrowse link
G Neu2 neuraminidase 2 involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
PMID:21873635
(PMID:14613940), (PMID:22228546)
(MGI:1354405|PMID:10713120)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10713120 PMID:14613940 PMID:22228546 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1354405, RGD:13792537 NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355 		JBrowse link
G Neu3 neuraminidase 3 involved_in IBA
ISO
ISS		 PMID:21873635
(MGI:3040535|PMID:14970224), (MGI:3765376|PMID:17708748), (MGI:6478528|PMID:11696012)
GO_REF:0000024
(PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392)		 RGD
UniProt		 PMID:10861246 PMID:11298736 PMID:11696012 PMID:14970224 PMID:15847605 More... GO_REF:0000024 MGI:3040535 MGI:3765376 MGI:6478528, RGD:13792537 NCBI chr 1:154,137,732...154,148,879
Ensembl chr 1:154,050,855...154,148,813 		JBrowse link
G Neu4 neuraminidase 4 involved_in IBA
ISO		 PMID:21873635
(MGI:4361102|PMID:19506080)
(PMID:15213228), (PMID:15847605)		 RGD PMID:15213228 PMID:15847605 PMID:19506080 PMID:21873635 MGI:4361102, RGD:13792537 NCBI chr 9:94,396,920...94,402,576
Ensembl chr 9:94,396,920...94,402,576 		JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3718765|PMID:17488728)		 UniProt
RGD		 PMID:17488728 GO_REF:0000024 MGI:3718765 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537 		JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:16857350) RGD PMID:16857350 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360 		JBrowse link
G Gm2a ganglioside GM2 activator IDA RGD PMID:9770472 RGD:1598995 NCBI chr10:39,219,221...39,231,756
Ensembl chr10:39,219,243...39,231,757 		JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within ISO MGI:2180548 (MGI:3607039|PMID:16251442) RGD PMID:16251442 MGI:3607039 NCBI chr 6:140,125,002...140,208,261
Ensembl chr 6:140,127,203...140,208,476 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:4950812|PMID:21408219) RGD PMID:21408219 MGI:4950812 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase (P blood group) acts_upstream_of_or_within ISO MGI:3624807|MGI:5445373 (MGI:3623723|PMID:16476743), (MGI:5445364|PMID:22875802) RGD PMID:16476743 PMID:22875802 MGI:3623723 MGI:5445364 NCBI chr 7:114,368,525...114,392,872
Ensembl chr 7:114,368,276...114,396,071 		JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO
IEA
ISS		 (PMID:12716912)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12716912 GO_REF:0000024 GO_REF:0000107 NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869 		JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) involved_in ISO (PMID:8855242) RGD PMID:8855242 NCBI chr 3:11,826,131...11,829,745 JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO		 GO_REF:0000024
(MGI:5285470|PMID:21628453)		 UniProt
RGD		 PMID:21628453 GO_REF:0000024 MGI:5285470 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IBA
ISO
ISS		 PMID:21873635
(MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)
GO_REF:0000024
(PMID:8643456)		 RGD
UniProt		 PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 More... GO_REF:0000024 MGI:2180222 MGI:3603060 MGI:5448789 MGI:5510915, RGD:13792537 NCBI chr 5:74,032,978...74,065,701
Ensembl chr 5:74,032,978...74,065,393 		JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 involved_in ISO
IBA		 (PMID:16293621), (PMID:19279011), (PMID:21700325), (PMID:24022302), (PMID:24211208), (PMID:9201993)
PMID:21873635
(MGI:5141165|PMID:21700325), (MGI:5501380|PMID:23707074), (MGI:6271235|PMID:24211208)		 RGD PMID:9201993 PMID:16293621 PMID:19279011 PMID:21700325 PMID:23707074 More... MGI:5141165 MGI:5501380 MGI:6271235, RGD:13792537 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISO
IEA
ISS		 (PMID:17080196), (PMID:30308956)
GO_REF:0000107
(MGI:3690511|PMID:17080196), (MGI:5484792|PMID:23250757)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17080196 PMID:23250757 PMID:30308956 GO_REF:0000024 GO_REF:0000107 MGI:3690511 MGI:5484792 NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072 		JBrowse link
G Gba3 glucosylceramidase beta 3 involved_in
NOT|involved_in		 ISO (PMID:17595169), (PMID:26724485)
(PMID:20728381)		 RGD PMID:17595169 PMID:20728381 PMID:26724485 NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653 		JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (MGI:3762988|PMID:17954912), (MGI:3795074|PMID:18346921) RGD PMID:17954912 PMID:18346921 MGI:3762988 MGI:3795074 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (MGI:3711591|PMID:17353235) RGD PMID:17353235 MGI:3711591 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in		 IDA
ISO		 PMID:10854427
MGI:1347344|MGI:3512453 (MGI:5445364|PMID:22875802)
PMID:12626403		 RGD PMID:22875802 PMID:10854427 PMID:10854427 PMID:12626403 MGI:5445364, RGD:1299594, RGD:1299594, RGD:632674 NCBI chr 5:141,101,329...141,113,760
Ensembl chr 5:141,107,983...141,115,641 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:9593693 PMID:21873635 RGD:70807, RGD:13792537 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247 		JBrowse link
G Fut4 fucosyltransferase 4 involved_in ISO
ISS		 (PMID:29593094)
GO_REF:0000024		 RGD
UniProt		 PMID:29593094 GO_REF:0000024 NCBI chr 8:11,586,721...11,590,682
Ensembl chr 8:11,586,721...11,590,682 		JBrowse link
G Fut4-ps1 fucosyltransferase 4, pseudogene 1 involved_in ISO (PMID:29593094) RGD PMID:29593094 NCBI chr 9:1,569,605...1,572,022 JBrowse link
G Fut9 fucosyltransferase 9 involved_in ISO
ISS		 (PMID:29593094)
GO_REF:0000024		 RGD
UniProt		 PMID:29593094 GO_REF:0000024 NCBI chr 5:39,351,815...39,565,256
Ensembl chr 5:39,351,819...39,565,130 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (MGI:1346847|PMID:10521438) RGD PMID:10521438 MGI:1346847 NCBI chr 2:241,741,933...241,911,214
Ensembl chr 2:241,742,688...241,911,208 		JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr18:70,736,395...70,802,537
Ensembl chr18:70,736,602...70,797,789 		JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:30660999) RGD PMID:30660999 NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 TAS RGD PMID:7521399 RGD:70050 NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase, alpha involved_in ISO (PMID:10838196), (PMID:8804427) RGD PMID:8804427 PMID:10838196 NCBI chr  X:97,769,227...97,780,646
Ensembl chr  X:97,768,996...97,780,664 		JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653 		JBrowse link
G Gla galactosidase, alpha acts_upstream_of_or_within ISO MGI:1861794 (MGI:1859538|PMID:10841515), (MGI:1860035|PMID:10840053), (MGI:2155538|PMID:11752062), (MGI:3525994|PMID:15629890), (MGI:86774|PMID:9122231) RGD PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 MGI:1859538 MGI:1860035 MGI:2155538 MGI:3525994 MGI:86774 NCBI chr  X:97,769,227...97,780,646
Ensembl chr  X:97,768,996...97,780,664 		JBrowse link
G Lct lactase involved_in IDA PMID:4752949 UniProt PMID:4752949 RGD:151356630 NCBI chr13:39,781,929...39,824,456
Ensembl chr13:39,781,929...39,824,456 		JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in ISO
IEA		 (PMID:17123352)
GO_REF:0000107		 RGD
Ensembl		 PMID:17123352 GO_REF:0000107 NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
ISS		 (PMID:9792633)
GO_REF:0000024		 RGD
UniProt		 PMID:9792633 GO_REF:0000024 NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (PMID:10320813) RGD PMID:10320813 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C, delta involved_in ISO
IEA		 (PMID:19279011)
GO_REF:0000107		 RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19574
    metabolic process 11556
      organic substance metabolic process 10908
        organonitrogen compound metabolic process 5634
          sphingolipid metabolic process 151
            glycosphingolipid metabolic process 55
              GSI anchor metabolic process + 0
              ganglioside metabolic process + 27
              globoside metabolic process + 3
              glycosphingolipid biosynthetic process + 31
              glycosphingolipid catabolic process + 15
              glycosylceramide metabolic process + 17
              lactosylceramide metabolic process + 2
              mannosyl-inositol phosphorylceramide metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19574
    metabolic process 11556
      primary metabolic process 9996
        lipid metabolic process 1406
          cellular lipid metabolic process 1035
            membrane lipid metabolic process 176
              sphingolipid metabolic process 151
                glycosphingolipid metabolic process 55
                  GSI anchor metabolic process + 0
                  ganglioside metabolic process + 27
                  globoside metabolic process + 3
                  glycosphingolipid biosynthetic process + 31
                  glycosphingolipid catabolic process + 15
                  glycosylceramide metabolic process + 17
                  lactosylceramide metabolic process + 2
                  mannosyl-inositol phosphorylceramide metabolic process + 0
paths to the root