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ONTOLOGY REPORT - ANNOTATIONS


Term:sphingomyelin catabolic process
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Accession:GO:0006685 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.
Synonyms:exact_synonym: sphingomyelin breakdown;   sphingomyelin catabolism;   sphingomyelin degradation



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sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMPD1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:5529577|PMID:23973266) MGI
GO_Central
TreeGrafter
Ensembl
UniProt
InterPro
PMID:23973266 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 MGI:5529577 NCBI chr 9:3,324,091...3,328,493
Ensembl chr 9:3,324,442...3,328,457
JBrowse link
G SMPD2 sphingomyelin phosphodiesterase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5529577|PMID:23973266) MGI
Ensembl
PMID:23973266 GO_REF:0000107 MGI:5529577 NCBI chr 1:75,508,303...75,511,572
Ensembl chr 1:75,508,350...75,512,153
JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5529577|PMID:23973266) MGI
Ensembl
PMID:23973266 GO_REF:0000107 MGI:5529577 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357
JBrowse link
G SMPD4 sphingomyelin phosphodiesterase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:50,663,488...50,689,355
Ensembl chr14:50,663,608...50,689,352
JBrowse link
G SMPD5 sphingomyelin phosphodiesterase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:639,228...643,057 JBrowse link
G SMPDL3A sphingomyelin phosphodiesterase acid like 3A NOT|involved_in ISO
IEA
(PMID:26783088) UniProt
InterPro
PMID:26783088 GO_REF:0000002 NCBI chr 1:39,848,641...39,869,184
Ensembl chr 1:39,848,648...39,868,731
JBrowse link
G SMPDL3B sphingomyelin phosphodiesterase acid like 3B involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:85,060,639...85,084,483
Ensembl chr 6:85,060,317...85,084,480
JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chr12:2,612,543...2,619,541
Ensembl chr12:2,612,574...2,619,519
JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,610...35,323,356
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17778
    metabolic process 10327
      nitrogen compound metabolic process 8466
        amide metabolic process 1209
          sphingomyelin metabolic process 20
            sphingomyelin catabolic process 9
              positive regulation of sphingomyelin catabolic process 2
              regulation of sphingomyelin catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 17778
    metabolic process 10327
      primary metabolic process 8980
        lipid metabolic process 1351
          cellular lipid metabolic process 1017
            membrane lipid metabolic process 210
              sphingolipid metabolic process 155
                sphingomyelin metabolic process 20
                  sphingomyelin catabolic process 9
                    positive regulation of sphingomyelin catabolic process 2
                    regulation of sphingomyelin catabolic process + 2
paths to the root