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ONTOLOGY REPORT - ANNOTATIONS


Term:sphinganine metabolic process
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Accession:GO:0006667 term browser browse the term
Definition:The chemical reactions and pathways involving sphinganine, D-erythro-2-amino-1,3-octadecanediol.
Synonyms:exact_synonym: dihydrosphingosine metabolic process;   dihydrosphingosine metabolism;   sphinganine metabolism



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sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3694278|PMID:16571104)
SGD:S000002705 (MGI:3505861|PMID:11937514)
RGD PMID:11937514 PMID:16571104 PMID:21873635 MGI:3505861 MGI:3694278, RGD:13792537 NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293
JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within ISO MGI:3815115 (MGI:3846467|PMID:19416652) RGD PMID:19416652 MGI:3846467 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1098386|PMID:9363775)
GO_REF:0000107
RGD
Ensembl
PMID:9363775 GO_REF:0000107 MGI:1098386 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    metabolic process 12359
      nitrogen compound metabolic process 10565
        organonitrogen compound metabolic process 7271
          sphingolipid metabolic process 153
            sphingoid metabolic process 23
              sphinganine metabolic process 3
                sphinganine biosynthetic process 2
Path 2
Term Annotations click to browse term
  biological_process 20091
    metabolic process 12359
      organic substance metabolic process 11881
        lipid metabolic process 1454
          cellular lipid metabolic process 1062
            membrane lipid metabolic process 201
              sphingolipid metabolic process 153
                sphingoid metabolic process 23
                  sphinganine metabolic process 3
                    sphinganine biosynthetic process 2
paths to the root