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ONTOLOGY REPORT - ANNOTATIONS


Term:phosphatidylserine metabolic process
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Accession:GO:0006658 term browser browse the term
Definition:The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes.
Synonyms:exact_synonym: phosphatidylserine metabolism



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phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipc lipase C, hepatic type IDA RGD PMID:2223857 RGD:1600650 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12359733)
GO_REF:0000107
(MGI:2446974|PMID:12359733)
UniProt
RGD
Ensembl
PMID:12359733 GO_REF:0000024 GO_REF:0000107 MGI:2446974 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO
GO_REF:0000024
(PMID:29724779)
UniProt
RGD
PMID:29724779 GO_REF:0000024 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:28947740) RGD PMID:28947740 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
JBrowse link
G Serinc1 serine incorporator 1 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr20:36,850,062...36,868,999
Ensembl chr20:36,850,076...36,896,691
JBrowse link
G Serinc2 serine incorporator 2 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr 5:142,592,308...142,614,628
Ensembl chr 5:142,592,309...142,618,364
JBrowse link
G Serinc5 serine incorporator 5 involved_in IDA PMID:16120614 HGNC-UCL PMID:16120614 RGD:8553290 NCBI chr 2:23,846,899...23,950,346
Ensembl chr 2:23,846,900...23,950,346
JBrowse link
phosphatidylserine acyl-chain remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO
ISS
(PMID:18195019), (PMID:18772128), (PMID:18782225)
(MGI:6436389|PMID:18287005)
GO_REF:0000024
RGD
UniProt
PMID:18195019 PMID:18287005 PMID:18772128 PMID:18782225 GO_REF:0000024 MGI:6436389 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880
JBrowse link
G Lpcat4 lysophosphatidylcholine acyltransferase 4 involved_in ISO (PMID:18458083) RGD PMID:18458083 NCBI chr 3:99,044,729...99,052,963
Ensembl chr 3:99,044,729...99,052,875
JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 involved_in ISO (PMID:18772128) RGD PMID:18772128 NCBI chr17:34,331,413...34,445,088
Ensembl chr17:34,331,422...34,445,088
JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18772128)
UniProt
RGD
PMID:18772128 GO_REF:0000024 NCBI chr 6:41,471,135...41,597,599
Ensembl chr 6:41,471,161...41,593,485
JBrowse link
G Pla2g2f phospholipase A2, group IIF involved_in ISO (PMID:11112443) RGD PMID:11112443 NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175
JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:5284813|PMID:12509439) RGD PMID:12509439 MGI:5284813 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO
IEA
(PMID:19014349)
GO_REF:0000041
RGD
UniProt
PMID:19014349 GO_REF:0000041 NCBI chr 7:63,845,017...63,906,791
Ensembl chr 7:63,844,268...63,906,791
JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:19014349)
GO_REF:0000041
MGI:2447151 (MGI:2446765|PMID:12361952)
RGD
UniProt
PMID:12361952 PMID:19014349 GO_REF:0000041 MGI:2446765 NCBI chr 1:196,241,439...196,267,632
Ensembl chr 1:196,241,494...196,267,685
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA
(PMID:19523918)
GO_REF:0000107
GO_REF:0000118
RGD
Ensembl
TreeGrafter
PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063
JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
ISS
(PMID:30643283)
GO_REF:0000033
GO_REF:0000118
MGI:5487621 (MGI:5469248|PMID:23297193)
GO_REF:0000024
RGD
GO_Central
TreeGrafter
UniProt
PMID:23297193 PMID:30643283 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5469248 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564
JBrowse link
G Abhd12b abhydrolase domain containing 12B involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:88,668,627...88,696,435
Ensembl chr 6:88,668,642...88,696,458
JBrowse link
G Abhd16a abhydrolase domain containing 16A, phospholipase involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(MGI:5779796|PMID:25580854)
GO_REF:0000118
GO_REF:0000033
Ensembl
UniProt
RGD
TreeGrafter
GO_Central
PMID:25580854 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5779796 NCBI chr20:3,719,089...3,733,952
Ensembl chr20:3,719,091...3,733,927
JBrowse link
G Abhd16b abhydrolase domain containing 16B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:168,594,677...168,596,574
Ensembl chr 3:168,594,609...168,619,762
JBrowse link
regulation of phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of ISO (MGI:6196220|PMID:30074985) RGD PMID:30074985 MGI:6196220 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20328
    metabolic process 11732
      cellular metabolic process 10286
        cellular modified amino acid metabolic process 198
          phosphatidylserine metabolic process 21
            negative regulation of phosphatidylserine metabolic process + 0
            phosphatidylserine acyl-chain remodeling 5
            phosphatidylserine biosynthetic process + 4
            phosphatidylserine catabolic process 4
            positive regulation of phosphatidylserine metabolic process + 0
            regulation of phosphatidylserine metabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 20328
    metabolic process 11732
      organic substance metabolic process 11224
        lipid metabolic process 1486
          cellular lipid metabolic process 1102
            glycerolipid metabolic process 398
              glycerophospholipid metabolic process 289
                phosphatidylserine metabolic process 21
                  negative regulation of phosphatidylserine metabolic process + 0
                  phosphatidylserine acyl-chain remodeling 5
                  phosphatidylserine biosynthetic process + 4
                  phosphatidylserine catabolic process 4
                  positive regulation of phosphatidylserine metabolic process + 0
                  regulation of phosphatidylserine metabolic process + 1
paths to the root