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ONTOLOGY REPORT - ANNOTATIONS


Term:lipid metabolic process
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Accession:GO:0006629 term browser browse the term
Definition:The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Synonyms:exact_synonym: lipid metabolism
 xref: Wikipedia:Lipid_metabolism



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lipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034648.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Aadac arylacetamide deacetylase NAS RGD PMID:11481320 RGD:70567 NCBI chr 2:144,163,436...144,186,086
Ensembl chr 2:144,135,319...144,174,734
JBrowse link
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase acts_upstream_of_or_within IDA PMID:15136565 MGI PMID:15136565 RGD:1303992 NCBI chr 8:122,000,241...122,026,447
Ensembl chr 8:122,000,389...122,026,447
JBrowse link
G Acaca acetyl-CoA carboxylase alpha acts_upstream_of_or_within ISO MGI:3700954 (MGI:3700580|PMID:17210641) RGD PMID:17210641 MGI:3700580 NCBI chr10:69,014,261...69,276,453
Ensembl chr10:69,014,170...69,276,457
JBrowse link
G Acly ATP citrate lyase involved_in IEP
IEA
GO_REF:0000043 UniProt
RGD
PMID:2295639 GO_REF:0000043, RGD:631761 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320
JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in ISO
ISS
(PMID:8117268)
GO_REF:0000024
RGD
UniProt
PMID:8117268 GO_REF:0000024 NCBI chr10:101,406,197...101,431,242
Ensembl chr10:101,406,197...101,431,232
JBrowse link
G Acsl1 acyl-CoA synthetase long-chain family member 1 TAS RGD PMID:2341402 RGD:70279 NCBI chr16:45,755,246...45,821,541
Ensembl chr16:45,755,254...45,821,541
JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 involved_in ISO (PMID:9598324) RGD PMID:9598324 NCBI chr  X:105,942,794...106,006,573
Ensembl chr  X:105,942,799...106,006,427
JBrowse link
G Acss3 acyl-CoA synthetase short-chain family member 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:42,241,261...42,450,230
Ensembl chr 7:42,242,652...42,450,230
JBrowse link
G Adipor2 adiponectin receptor 2 IEP RGD PMID:20965162 RGD:25440494 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
G Akr7a2 aldo-keto reductase family 7, member A2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:151,552,375...151,560,914
Ensembl chr 5:151,552,343...151,560,909
JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein acts_upstream_of_or_within ISO MGI:3576051 (MGI:3588454|PMID:16000322) RGD PMID:16000322 MGI:3588454 NCBI chr 4:118,125,581...118,226,005
Ensembl chr 4:118,125,607...118,226,005
JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO
ISS
(PMID:17493578), (PMID:18311922), (PMID:22984144)
GO_REF:0000024
RGD
UniProt
PMID:17493578 PMID:18311922 PMID:22984144 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO (PMID:23242647), (PMID:25293588) RGD PMID:23242647 PMID:25293588 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in ISO (PMID:17493578), (PMID:18311922) RGD PMID:17493578 PMID:18311922 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Angptl4 angiopoietin-like 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:14,550,288...14,557,797
Ensembl chr 7:14,550,311...14,556,519
JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within IDA
ISO
MGI:1857141|MGI:2183298|MGI:88057|MGI:96765 (MGI:1928445|PMID:11120757), (MGI:2386141|PMID:12072432), (MGI:3612778|PMID:15790761), (MGI:64433|PMID:8460149) RGD PMID:8460149 PMID:11120757 PMID:12072432 PMID:15790761 PMID:9931432 MGI:1928445 MGI:2386141 MGI:3612778 MGI:64433, RGD:1626403 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Apoc2 apolipoprotein C2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476
JBrowse link
G Apod apolipoprotein D involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:19176353)
PMID:21873635
UniProt
Ensembl
RGD
PMID:19176353 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO MGI:88052 (MGI:1928445|PMID:11120757) RGD PMID:11120757 MGI:1928445 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Asmt acetylserotonin O-methyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:16,304,719...16,309,568
Ensembl chr12:16,304,719...16,309,568
JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3719337|PMID:17612527)
Ensembl
RGD
PMID:17612527 GO_REF:0000107 MGI:3719337 NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3719337|PMID:17612527)
Ensembl
RGD
PMID:17612527 GO_REF:0000107 MGI:3719337 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273
JBrowse link
G Awat1 acyl-CoA wax alcohol acyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:65,668,205...65,674,450
Ensembl chr  X:65,668,205...65,674,450
JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:65,482,240...65,490,500
Ensembl chr  X:65,481,929...65,527,625
JBrowse link
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:153,847,297...153,877,371
Ensembl chr 2:153,846,474...153,877,332
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:205,731,814...205,743,430
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Cidea cell death-inducing DFFA-like effector a acts_upstream_of_or_within ISO MGI:2675505 (MGI:2673116|PMID:12910269) RGD PMID:12910269 MGI:2673116 NCBI chr18:60,894,917...60,920,485
Ensembl chr18:60,894,874...60,920,481
JBrowse link
G Cnep1r1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:18,932,631...18,947,667
Ensembl chr19:18,932,682...18,947,667
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:6150543|PMID:29581031) RGD PMID:29581031 MGI:6150543 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:6150543|PMID:29581031) RGD PMID:29581031 MGI:6150543 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Cyp4x1 cytochrome P450, family 4, subfamily x, polypeptide 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:128,652,844...128,683,338
Ensembl chr 5:128,651,776...128,682,779
JBrowse link
G Daglb diacylglycerol lipase, beta involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:11,059,732...11,102,170
Ensembl chr12:11,059,732...11,102,154
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428
JBrowse link
G Dgat2l6 diacylglycerol O-acyltransferase 2-like 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:65,614,430...65,637,962
Ensembl chr  X:65,614,430...65,637,962
JBrowse link
G Dpep1 dipeptidase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257
JBrowse link
G Dpep2 dipeptidase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:33,883,557...33,896,487
Ensembl chr19:33,885,478...33,891,954
JBrowse link
G Enpp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 involved_in ISO
IBA
ISS
(PMID:15788404)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15788404 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:45,165,883...45,294,126
Ensembl chr16:45,169,178...45,294,077
JBrowse link
G Erg28 ergosterol biosynthesis 28 homolog involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:105,474,112...105,483,078
Ensembl chr 6:105,474,113...105,483,078
JBrowse link
G Fabp5 fatty acid binding protein 5 acts_upstream_of_or_within ISO MGI:2450172 (MGI:2449716|PMID:12540600) RGD PMID:12540600 MGI:2449716 NCBI chr 2:91,765,056...91,768,716
Ensembl chr 2:91,765,056...91,853,773
JBrowse link
G Fads1 fatty acid desaturase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Fads2 fatty acid desaturase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:206,707,384...206,747,333
Ensembl chr 1:206,708,783...206,748,789
JBrowse link
G Fads2b fatty acid desaturase 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:70,535,735...70,575,163
Ensembl chr 3:70,535,459...70,575,442
JBrowse link
G Fads3 fatty acid desaturase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:206,685,667...206,702,538
Ensembl chr 1:206,685,894...206,704,769
JBrowse link
G Fads6 fatty acid desaturase 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:100,522,981...100,538,181
Ensembl chr10:100,522,981...100,538,181
JBrowse link
G Far1 fatty acyl CoA reductase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:167,644,622...167,705,868
Ensembl chr 1:167,644,677...167,705,730
JBrowse link
G Far2 fatty acyl CoA reductase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:180,973,968...181,087,862
Ensembl chr 4:181,007,622...181,087,255
JBrowse link
G Fuca1 alpha-L-fucosidase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:148,152,718...148,169,972
Ensembl chr 5:148,152,700...148,169,972
JBrowse link
G Fut1 fucosyltransferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:71,840,497...71,883,936
Ensembl chr10:71,840,497...71,883,850
JBrowse link
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:65,826,273...65,835,361
Ensembl chr  X:65,826,574...65,835,361
JBrowse link
G Gdpd4 glycerophosphodiester phosphodiesterase domain containing 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:152,233,516...152,342,329
Ensembl chr 1:152,233,499...152,342,158
JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO MGI:3589261 (MGI:1858834|PMID:10754271) RGD PMID:10754271 MGI:1858834 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Hacl1 2-hydroxyacyl-CoA lyase 1 acts_upstream_of_or_within ISO (MGI:1930887|PMID:11171065) RGD PMID:11171065 MGI:1930887 NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027
JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in ISO
IBA
(PMID:8027038)
PMID:21873635
RGD PMID:8027038 PMID:21873635 RGD:13792537 NCBI chr 5:148,178,203...148,192,072
Ensembl chr 5:148,178,252...148,192,068
JBrowse link
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,757,301...76,887,300
Ensembl chr 8:76,757,497...76,886,816
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3622274 (MGI:3619855|PMID:16498401)
Ensembl
RGD
PMID:16498401 GO_REF:0000107 MGI:3619855 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Il1rn interleukin 1 receptor antagonist acts_upstream_of_or_within ISO MGI:2157397 (MGI:2675567|PMID:12975454) RGD PMID:12975454 MGI:2675567 NCBI chr 3:7,111,567...7,127,451
Ensembl chr 3:7,111,550...7,127,445
JBrowse link
G Kbtbd2 kelch repeat and BTB domain containing 2 acts_upstream_of_or_within_positive_effect ISO MGI:5806297 (MGI:5806303|PMID:27708159) RGD PMID:27708159 MGI:5806303 NCBI chr 4:86,027,947...86,050,266
Ensembl chr 4:86,027,947...86,050,211
JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231
JBrowse link
G Ldlr low density lipoprotein receptor acts_upstream_of_or_within ISO MGI:88052 (MGI:1928445|PMID:11120757) RGD PMID:11120757 MGI:1928445 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lep leptin acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
protein:altered expression: serum
MGI:1856424 (MGI:2673743|PMID:12815040)
PMID:21873635
RGD PMID:12815040 PMID:29089335 PMID:21873635 MGI:2673743, RGD:21410183, RGD:13792537 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lipc lipase C, hepatic type involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Lpin1 lipin 1 acts_upstream_of_or_within ISO MGI:1856603 (MGI:3044876|PMID:14522948), (MGI:58258|PMID:2722772) RGD PMID:2722772 PMID:14522948 MGI:3044876 MGI:58258 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
JBrowse link
G Lpin2 lipin 2 involved_in ISO (MGI:3708400|PMID:17158099) RGD PMID:17158099 MGI:3708400 NCBI chr 9:111,083,378...111,158,193
Ensembl chr 9:111,083,745...111,158,193
JBrowse link
G Lrp10 LDL receptor related protein 10 acts_upstream_of_or_within ISO (MGI:1928400|PMID:11123907) RGD PMID:11123907 MGI:1928400 NCBI chr15:27,921,105...27,927,507
Ensembl chr15:27,920,259...27,927,505
JBrowse link
G Mbtps1 membrane-bound transcription factor peptidase, site 1 acts_upstream_of_or_within ISO MGI:2156485 (MGI:2154012|PMID:11717426) RGD PMID:11717426 MGI:2154012 NCBI chr19:47,561,598...47,612,769
Ensembl chr19:47,561,598...47,612,791
JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO (PMID:9278457) RGD PMID:9278457 NCBI chr 2:135,679,524...135,715,828
Ensembl chr 2:135,693,557...135,715,828
JBrowse link
G Mgst3 microsomal glutathione S-transferase 3 involved_in ISO (PMID:9278457) RGD PMID:9278457 NCBI chr13:79,526,541...79,547,479
Ensembl chr13:79,526,541...79,547,411
JBrowse link
G Mid1ip1 MID1 interacting protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:12,060,993...12,063,318
Ensembl chr  X:12,060,883...12,065,774
JBrowse link
G Mir423 microRNA 423 acts_upstream_of_or_within ISO (MGI:5922106|PMID:28411267) RGD PMID:28411267 MGI:5922106 NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226
JBrowse link
G Mogat1 monoacylglycerol O-acyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:79,980,963...79,988,513
Ensembl chr 9:79,956,649...79,988,513
JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2656067|PMID:12576479)
RGD PMID:12576479 PMID:21873635 MGI:2656067, RGD:13792537 NCBI chr 1:153,521,813...153,545,756
Ensembl chr 1:153,521,815...153,545,756
JBrowse link
G Mogat3 monoacylglycerol O-acyltransferase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,668,703...19,669,420
Ensembl chr12:19,668,788...19,670,754
JBrowse link
G Mttp microsomal triglyceride transfer protein acts_upstream_of_or_within ISO (MGI:2386141|PMID:12072432) RGD PMID:12072432 MGI:2386141 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239
JBrowse link
G Naa40 N(alpha)-acetyltransferase 40, NatD catalytic subunit acts_upstream_of_or_within ISO MGI:2176228|MGI:5317907 (MGI:5317503|PMID:22231784) RGD PMID:22231784 MGI:5317503 NCBI chr 1:204,410,636...204,430,890
Ensembl chr 1:204,413,498...204,430,717
JBrowse link
G Nkx1-1 NK1 homeobox 1 acts_upstream_of_or_within ISO MGI:2684149 (MGI:5301249|PMID:21126319) RGD PMID:21126319 MGI:5301249 NCBI chr14:77,296,676...77,300,575
Ensembl chr14:77,296,796...77,300,036
JBrowse link
G Nphp3 nephrocystin 3 acts_upstream_of_or_within ISO MGI:1856987 (MGI:50727|PMID:1385849) RGD PMID:1385849 MGI:50727 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IEP RGD PMID:11781314 RGD:625467 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Nr1h5 nuclear receptor subfamily 1, group H, member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:190,461,036...190,481,420
Ensembl chr 2:190,462,256...190,481,211
JBrowse link
G Oma1 OMA1 zinc metallopeptidase involved_in ISS
ISO
GO_REF:0000024
(MGI:5426110|PMID:22433842)
UniProt
RGD
PMID:22433842 GO_REF:0000024 MGI:5426110 NCBI chr 5:118,083,728...118,136,980
Ensembl chr 5:118,083,728...118,136,980
JBrowse link
G Pc pyruvate carboxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within ISO MGI:2182390 (MGI:2157262|PMID:11792850) RGD PMID:11792850 MGI:2157262 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Plagl2 PLAG1 like zinc finger 2 acts_upstream_of_or_within ISO MGI:3771822 (MGI:3771409|PMID:17983586) RGD PMID:17983586 MGI:3771409 NCBI chr 3:141,695,322...141,708,567
Ensembl chr 3:141,695,322...141,708,503
JBrowse link
G Plb1 phospholipase B1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117
JBrowse link
G Plcl1 phospholipase C-like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:56,901,573...57,238,782
Ensembl chr 9:56,901,534...57,238,782
JBrowse link
G Plcxd1 phosphatidylinositol-specific phospholipase C, X domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:46,578,917...46,582,181
Ensembl chr12:46,579,225...46,582,392
JBrowse link
G Plcxd2 phosphatidylinositol-specific phospholipase C, X domain containing 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:54,800,977...54,853,348
Ensembl chr11:54,789,477...54,853,344
JBrowse link
G Plcxd3 phosphatidylinositol-specific phospholipase C, X domain containing 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:53,567,022...53,746,384
Ensembl chr 2:53,567,022...53,746,384
JBrowse link
G Plin1 perilipin 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:133,664,294...133,676,854
Ensembl chr 1:133,664,892...133,676,828
JBrowse link
G Pltp phospholipid transfer protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647
JBrowse link
G Pnlip pancreatic lipase involved_in IDA
ISO
(PMID:24262094) RGD PMID:24262094 PMID:15181189 RGD:1601426 NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654
JBrowse link
G Pnliprp1 pancreatic lipase-related protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:257,867,885...257,883,514
Ensembl chr 1:257,867,885...257,883,514
JBrowse link
G Pnpla7 patatin-like phospholipase domain containing 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:7,782,572...7,861,504
Ensembl chr 3:7,782,572...7,861,497
JBrowse link
G Pon1 paraoxonase 1 IEP RGD PMID:11015468 RGD:731237 NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta acts_upstream_of_or_within IDA
ISO
MGI:1889516|MGI:3623147 (MGI:1860360|PMID:10866668), (MGI:3621068|PMID:16581799) RGD PMID:10866668 PMID:16581799 PMID:20338185 MGI:1860360 MGI:3621068, RGD:2324873 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Prlh prolactin releasing hormone acts_upstream_of_or_within ISO MGI:3832409 (MGI:3831610|PMID:19033670) RGD PMID:19033670 MGI:3831610 NCBI chr 9:91,543,128...91,549,022
Ensembl chr 9:91,547,901...91,548,818
JBrowse link
G Ptges2 prostaglandin E synthase 2 involved_in ISO (PMID:17585783) RGD PMID:17585783 NCBI chr 3:15,690,501...15,697,688
Ensembl chr 3:15,690,501...15,697,688
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within ISO MGI:3522021 (MGI:3513751|PMID:15520383) RGD PMID:15520383 MGI:3513751 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ptprn2 protein tyrosine phosphatase, receptor type N2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:137,439,572...138,191,575
Ensembl chr 6:137,439,540...138,191,575
JBrowse link
G Scly selenocysteine lyase acts_upstream_of_or_within ISO MGI:4362224 (MGI:5444804|PMID:22890841) RGD PMID:22890841 MGI:5444804 NCBI chr 9:91,890,269...91,910,947
Ensembl chr 9:91,890,306...91,910,941
JBrowse link
G Slc16a1 solute carrier family 16 member 1 involved_in ISO (MGI:5545659|PMID:24367518) RGD PMID:24367518 MGI:5545659 NCBI chr 2:192,123,755...192,144,617
Ensembl chr 2:192,124,289...192,144,611
JBrowse link
G Slc16a11 solute carrier family 16, member 11 involved_in ISO (PMID:24390345) RGD PMID:24390345 NCBI chr10:54,929,129...54,933,021
Ensembl chr10:54,927,725...54,942,915
JBrowse link
G St3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:104,134,553...104,192,560
Ensembl chr 4:104,134,613...104,192,558
JBrowse link
G Sult1d1 sulfotransferase family 1D, member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:20,441,135...20,476,341
Ensembl chr14:20,441,924...20,476,341
JBrowse link
G Thrsp thyroid hormone responsive involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:151,723,415...151,727,740
Ensembl chr 1:151,723,086...151,728,075
JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:3053791 (MGI:3531373|PMID:15298681) RGD PMID:15298681 MGI:3531373
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:2385968 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:97,603,329...97,708,103
Ensembl chr 5:97,609,392...97,736,270
JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6109043|PMID:28785050)
Ensembl
RGD
PMID:28785050 GO_REF:0000107 MGI:6109043 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
G Zfp870 zinc finger protein 870 acts_upstream_of_or_within ISO (PMID:29320745) RGD PMID:29320745 NCBI chr 7:11,990,146...12,003,813
Ensembl chr 7:11,990,148...12,003,813
JBrowse link
1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (MGI:6450296|PMID:22621786), (MGI:6450304|PMID:11123925) RGD PMID:11123925 PMID:22621786 MGI:6450296 MGI:6450304 NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:26774281)
UniProt
RGD
PMID:26774281 GO_REF:0000024 NCBI chr17:81,496,669...81,668,180 JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO
ISS
(PMID:26774281)
GO_REF:0000024
RGD
UniProt
PMID:26774281 GO_REF:0000024 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO
ISS
IEA
(PMID:26774281)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IBA
ISO
PMID:21873635
(MGI:3690523|PMID:17034760)
RGD PMID:17034760 PMID:21873635 MGI:3690523, RGD:13792537 NCBI chr 4:103,112,974...103,132,122
Ensembl chr 4:103,112,963...103,132,017
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phyh phytanoyl-CoA 2-hydroxylase IDA RGD PMID:10588950 RGD:727286 NCBI chr17:73,329,461...73,346,359
Ensembl chr17:73,329,082...73,346,409
JBrowse link
3-keto-sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdsr 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:15364918)
RGD PMID:15364918 PMID:21873635 RGD:13792537 NCBI chr13:22,862,117...22,894,118
Ensembl chr13:22,862,117...22,894,108
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2662611|PMID:11876656)
Ensembl
RGD
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO
ISS
(PMID:11304534)
GO_REF:0000024
RGD
UniProt
PMID:11304534 GO_REF:0000024 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241
JBrowse link
G Rdh16 retinol dehydrogenase 16 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 7:63,616,724...63,624,120
Ensembl chr 7:63,597,536...63,624,124
JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IDA RGD PMID:17167544 RGD:2306320 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
acetoacetic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyrp1 tyrosinase-related protein 1 acts_upstream_of_or_within ISO MGI:1855960 (MGI:76308|PMID:7665913) RGD PMID:7665913 MGI:76308 NCBI chr 5:95,280,982...95,299,516
Ensembl chr 5:95,280,982...95,299,516
JBrowse link
acylglycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in ISO
ISS
(PMID:22969151)
(MGI:5616317|PMID:18096503)
GO_REF:0000024
RGD
UniProt
PMID:18096503 PMID:22969151 GO_REF:0000024 MGI:5616317 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in ISO
IBA
(PMID:26989199)
PMID:21873635
RGD PMID:26989199 PMID:21873635 RGD:13792537 NCBI chr 1:133,217,403...133,298,564
Ensembl chr 1:133,217,375...133,299,061
JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase involved_in ISO
IBA
ISS
(PMID:22969151)
(MGI:5616317|PMID:18096503)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18096503 PMID:22969151 PMID:21873635 GO_REF:0000024 MGI:5616317, RGD:13792537 NCBI chr15:16,859,740...16,907,094
Ensembl chr15:16,859,738...16,906,985
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5318031|PMID:15220344)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15220344 GO_REF:0000024 GO_REF:0000107 MGI:5318031 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Lypla2 lysophospholipase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:25301951)
UniProt
RGD
PMID:25301951 GO_REF:0000024 NCBI chr 5:148,198,466...148,203,062
Ensembl chr 5:148,198,439...148,203,092
JBrowse link
G Mgll monoglyceride lipase involved_in ISO
ISS
(PMID:22969151)
(MGI:4836780|PMID:20729846), (MGI:5616317|PMID:18096503)
GO_REF:0000024
RGD
UniProt
PMID:18096503 PMID:20729846 PMID:22969151 GO_REF:0000024 MGI:4836780 MGI:5616317 NCBI chr 4:121,192,187...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
acylglycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 acts_upstream_of_or_within ISO (MGI:3612212|PMID:15367102) RGD PMID:15367102 MGI:3612212 NCBI chr16:70,939,480...70,985,761
Ensembl chr16:70,943,135...70,985,560
JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO
PMID:19342457
GO_REF:0000107
(PMID:19342457)
Ensembl
RGD
PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP
IBA
PMID:19342457
PMID:21873635
UniProt
GO_Central
PMID:19342457 PMID:21873635 RGD:4891166, RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11832364 PMID:21873635 RGD:727991, RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:1741400), (PMID:19342457), (PMID:2256920), (PMID:23322723) RGD PMID:1741400 PMID:2256920 PMID:19342457 PMID:23322723 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B involved_in ISO MGI:3693642 (MGI:3692691|PMID:16868309) RGD PMID:16868309 MGI:3692691 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6478095|PMID:28567665)
Ensembl
RGD
PMID:28567665 GO_REF:0000107 MGI:6478095 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
androgen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 TAS RGD PMID:7702752 RGD:1298833 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 IDA androstenedione RGD PMID:8612487 RGD:728619 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202
JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IDA
ISO
(PMID:25322271) RGD PMID:25322271 PMID:1985917 RGD:632871 NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852
JBrowse link
G Med1 mediator complex subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19497978)
UniProt
RGD
PMID:19497978 GO_REF:0000024 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Scarb1 scavenger receptor class B, member 1 IDA RGD PMID:12746305 RGD:1304382 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 acts_upstream_of_or_within IDA
ISO
dihydrotestosterone
MGI:1857454 (MGI:3045995|PMID:15249131)
RGD PMID:15249131 PMID:12606426 MGI:3045995, RGD:4891962 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 acts_upstream_of_or_within IDA
ISO
dihydrotestosterone
(MGI:3045995|PMID:15249131)
RGD PMID:15249131 PMID:12606426 MGI:3045995, RGD:4891962 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
androgen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:26482249)
Ensembl
RGD
PMID:26482249 GO_REF:0000107 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Hsd17b11 hydroxysteroid (17-beta) dehydrogenase 11 involved_in ISO (PMID:12697717) RGD PMID:12697717 NCBI chr14:5,693,304...5,743,157
Ensembl chr14:5,711,964...5,743,161
JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in ISO (PMID:26482249) RGD PMID:26482249 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IDA RGD PMID:2339109 RGD:70289 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
androgen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin IDA RGD PMID:18094363 RGD:2325639 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in ISO
IBA
IEA
(PMID:7508385)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:7508385 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Chst10 carbohydrate sulfotransferase 10 involved_in ISO
IEA
(PMID:23269668)
GO_REF:0000107
RGD
Ensembl
PMID:23269668 GO_REF:0000107 NCBI chr 9:41,092,805...41,122,737
Ensembl chr 9:41,092,808...41,122,503
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
GO_REF:0000107
MGI:2154536 (MGI:2136569|PMID:11356695)
Ensembl
RGD
PMID:11356695 PMID:19492405 GO_REF:0000107 MGI:2136569, RGD:4890392 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO (PMID:11294878) RGD PMID:11294878 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241
JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2150897 (MGI:3839071|PMID:18755802)
Ensembl
RGD
PMID:18755802 GO_REF:0000107 MGI:3839071 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
IEA
ISS
(PMID:12917011)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12917011 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,152...21,091,597
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 involved_in ISO
IEA
(PMID:7487879)
GO_REF:0000107
RGD
Ensembl
PMID:7487879 GO_REF:0000107 NCBI chr18:43,328,903...43,417,950
Ensembl chr18:43,328,824...43,417,952
JBrowse link
G Hsd17b6 hydroxysteroid (17-beta) dehydrogenase 6 TAS RGD PMID:9188497 RGD:1299376 NCBI chr 7:422,466...442,008
Ensembl chr 7:422,480...442,425
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in ISO
ISS
IEA
(PMID:12732193)
(MGI:2662631|PMID:12732193)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12732193 GO_REF:0000024 GO_REF:0000107 MGI:2662631 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
JBrowse link
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 acts_upstream_of_or_within ISO (MGI:3511120|PMID:9712896) RGD PMID:9712896 MGI:3511120 NCBI chr20:4,826,725...4,828,742
Ensembl chr20:4,822,026...4,828,742
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP dihydrotestosterone RGD PMID:8809674 RGD:5686298 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO MGI:3526857 (MGI:3820330|PMID:19056881) RGD PMID:19056881 MGI:3820330 NCBI chr 1:185,427,982...185,479,157
Ensembl chr 1:185,428,048...185,479,156
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP nandrolone RGD PMID:23338851 RGD:7241839 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO MGI:3526851 (MGI:3820330|PMID:19056881) RGD PMID:19056881 MGI:3820330 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:1857796 (MGI:3037217|PMID:15013801)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15013801 GO_REF:0000024 GO_REF:0000107 MGI:3037217 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IDA RGD PMID:20954080 RGD:4891498 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 involved_in IDA
ISO
(PMID:1944596) RGD PMID:1944596 PMID:20954080 RGD:4891498 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO MGI:3526866 (MGI:3820330|PMID:19056881) RGD PMID:19056881 MGI:3820330 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327
JBrowse link
G Ugt2b7 UDP glucuronosyltransferase family 2 member B7 involved_in ISO
ISS
(PMID:17442341)
GO_REF:0000024
RGD
UniProt
PMID:17442341 GO_REF:0000024 NCBI chr14:20,896,682...20,919,604
Ensembl chr14:20,896,682...20,919,604
JBrowse link
arachidonic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07021930.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO
IBA
IDA
(PMID:1851637), (PMID:8319693)
(MGI:1202206|PMID:9501222), (MGI:66203|PMID:8188678)
PMID:21873635
PMID:23382512
RGD PMID:1851637 PMID:8188678 PMID:8319693 PMID:9501222 PMID:21873635 More... MGI:1202206 MGI:66203, RGD:13792537, RGD:8554649 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA
ISO
IDA
IBA
GO_REF:0000107
(MGI:1313249|PMID:10100631), (MGI:3608217|PMID:16129665), (MGI:6316908|PMID:11256953)
(PMID:15629692)
PMID:23382512
PMID:21873635
Ensembl
RGD
PMID:10100631 PMID:11256953 PMID:15629692 PMID:16129665 PMID:23382512 More... GO_REF:0000107 MGI:1313249 MGI:3608217 MGI:6316908, RGD:8554649, RGD:13792537 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Alox12e arachidonate 12-lipoxygenase, epidermal involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:55,034,392...55,041,857
Ensembl chr10:55,034,392...55,041,928
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IDA
ISO
NAS
IBA
(MGI:1101294|PMID:8798642), (MGI:66203|PMID:8188678)
PMID:15123652
(PMID:17052953), (PMID:1944593), (PMID:24282679), (PMID:8334154)
PMID:23382512
PMID:21873635
RGD PMID:1944593 PMID:8188678 PMID:8334154 PMID:8798642 PMID:17052953 More... MGI:1101294 MGI:66203, RGD:70288, RGD:5509794, RGD:8554649, RGD:13792537 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IBA
ISO
IEA
IDA
PMID:21873635
(MGI:1097306|PMID:9305900)
(PMID:10542053), (PMID:10625675), (PMID:24282679), (PMID:24497644), (PMID:27145229), (PMID:9177185)
GO_REF:0000107
PMID:23382512
RGD
Ensembl
PMID:9177185 PMID:9305900 PMID:10542053 PMID:10625675 PMID:24282679 More... GO_REF:0000107 MGI:1097306, RGD:13792537, RGD:8554649 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in IDA
ISO
IBA
PMID:23382512
(MGI:3694035|PMID:17045234)
(PMID:12881489), (PMID:17045234)
PMID:21873635
RGD PMID:12881489 PMID:17045234 PMID:23382512 PMID:21873635 MGI:3694035, RGD:8554649, RGD:13792537 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS
GO_REF:0000041
(MGI:5572883|PMID:15258110)
GO_REF:0000024
GO_REF:0000107
(PMID:15258110)
UniProt
RGD
Ensembl
PMID:15258110 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 MGI:5572883 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Cyp2c23 cytochrome P450, family 2, subfamily c, polypeptide 23 NAS RGD PMID:8514789 RGD:727619 NCBI chr 1:242,889,218...242,913,869
Ensembl chr 1:242,889,224...242,913,858
JBrowse link
G Cyp2c24 cytochrome P450, family 2, subfamily c, polypeptide 24 acts_upstream_of_or_within ISO (MGI:3665447|PMID:15102943) RGD PMID:15102943 MGI:3665447 NCBI chr 1:236,873,967...236,936,238
Ensembl chr 1:236,873,967...236,936,238
JBrowse link
G Cyp2c6v1 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 involved_in ISO (MGI:1277710|PMID:9721182) RGD PMID:9721182 MGI:1277710 NCBI chr 1:237,938,521...237,976,238
Ensembl chr 1:237,693,094...238,057,596
JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (MGI:1277710|PMID:9721182) RGD PMID:9721182 MGI:1277710
G Cyp2d1 cytochrome P450, family 2, subfamily d, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,908,950...113,913,420 JBrowse link
G Cyp2d2 cytochrome P450, family 2, subfamily d, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,935,138...113,939,209
Ensembl chr 7:113,935,138...113,939,209
JBrowse link
G Cyp2d3 cytochrome P450, family 2, subfamily d, polypeptide 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,917,711...113,922,068 JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10945868 PMID:21873635 RGD:1599723, RGD:13792537 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759
JBrowse link
G Cyp2d5 cytochrome P450, family 2, subfamily d, polypeptide 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,899,905...113,904,458
Ensembl chr 7:113,899,890...113,904,495
JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in IDA
IEA
GO_REF:0000041 UniProt
RGD
PMID:9143331 GO_REF:0000041, RGD:632631 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12857783 PMID:21873635 RGD:1625451, RGD:13792537 NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464
JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 involved_in TAS
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:12060587 PMID:21873635 PMID:12857783 RGD:628319, RGD:13792537, RGD:1625451 NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165
JBrowse link
G Cyp4a3 cytochrome P450, family 4, subfamily a, polypeptide 3 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12857783 PMID:21873635 RGD:1625451, RGD:13792537 NCBI chr 5:129,097,571...129,115,488
Ensembl chr 5:129,097,926...129,115,463
JBrowse link
G Cyp4a8 cytochrome P450, family 4, subfamily a, polypeptide 8 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15618658 PMID:21873635 RGD:2303409, RGD:13792537 NCBI chr 5:128,702,130...128,733,476
Ensembl chr 5:128,702,131...128,733,476
JBrowse link
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16415532 PMID:21873635 RGD:2301706, RGD:13792537 NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046
JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940
JBrowse link
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,717,208...11,733,507
Ensembl chr 7:11,717,208...11,733,506
JBrowse link
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229
JBrowse link
G Dagla diacylglycerol lipase, alpha acts_upstream_of_or_within
involved_in
ISS
ISO
GO_REF:0000024
(MGI:6423248|PMID:17584991)
MGI:4438719 (MGI:4437165|PMID:20147530)
(PMID:14610053)
UniProt
RGD
PMID:14610053 PMID:17584991 PMID:20147530 GO_REF:0000024 MGI:4437165 MGI:6423248 NCBI chr 1:206,890,635...206,947,332
Ensembl chr 1:206,890,638...206,947,232
JBrowse link
G Daglb diacylglycerol lipase, beta involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(MGI:6414691|PMID:23103940)
MGI:3529581 (MGI:4437165|PMID:20147530)
(PMID:14610053)
Ensembl
RGD
PMID:14610053 PMID:20147530 PMID:23103940 PMID:23103940 GO_REF:0000107 MGI:4437165 MGI:6414691, RGD:25671391 NCBI chr12:11,059,732...11,102,170
Ensembl chr12:11,059,732...11,102,154
JBrowse link
G Ephx1 epoxide hydrolase 1 involved_in ISO
IBA
ISS
(PMID:24958911)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24958911 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr13:92,714,315...92,744,124
Ensembl chr13:92,714,315...92,790,235
JBrowse link
G Fads1 fatty acid desaturase 1 IMP RGD PMID:11414679 RGD:632758 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:893248|PMID:9195979)
GO_REF:0000024
(PMID:11115402)
Ensembl
RGD
UniProt
PMID:9195979 PMID:11115402 GO_REF:0000024 GO_REF:0000107 MGI:893248 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Gpx4 glutathione peroxidase 4 involved_in ISO
ISS
(PMID:11115402)
GO_REF:0000024
RGD
UniProt
PMID:11115402 GO_REF:0000024 NCBI chr 7:9,650,186...9,652,982
Ensembl chr 7:9,650,185...9,652,982
JBrowse link
G Mapk3 mitogen activated protein kinase 3 IEP RGD PMID:15027896 RGD:1626220 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mgll monoglyceride lipase involved_in ISS
ISO
GO_REF:0000024
(MGI:4836780|PMID:20729846)
UniProt
RGD
PMID:20729846 GO_REF:0000024 MGI:4836780 NCBI chr 4:121,192,187...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
G Pla2g2f phospholipase A2, group IIF involved_in ISO (MGI:6467677|PMID:11877435) RGD PMID:11877435 MGI:6467677 NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IMP
IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
GO_REF:0000041
(PMID:7794891)
Ensembl
UniProt
RGD
PMID:7794891 PMID:16603549 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107, RGD:1642459 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:10833412), (PMID:15695510), (PMID:28442572)
UniProt
RGD
PMID:10833412 PMID:15695510 PMID:28442572 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484
JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:241,630,021...241,715,493
Ensembl chr 2:241,630,053...241,716,134
JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S involved_in ISO
IBA
(MGI:3688056|PMID:11483512)
PMID:21873635
RGD PMID:11483512 PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr10:63,222,611...63,237,190
Ensembl chr10:63,222,572...63,237,187
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis, class T involved_in IBA
ISO
PMID:21873635
(MGI:3688056|PMID:11483512)
RGD PMID:11483512 PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr 3:153,227,749...153,236,922
Ensembl chr 3:153,227,420...153,236,887
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:12802054)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:12802054 PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:13792537 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
JBrowse link
beta-carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3767552 (MGI:5638293|PMID:25701869)
Ensembl
RGD
PMID:25701869 GO_REF:0000107 MGI:5638293 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
ISS
(MGI:5613029|PMID:25168382)
GO_REF:0000024
RGD
UniProt
PMID:25168382 GO_REF:0000024 MGI:5613029 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:7508385)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:7508385 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Amacr alpha-methylacyl-CoA racemase involved_in IDA
IEA
GO_REF:0000041 UniProt
RGD
PMID:11964182 GO_REF:0000041, RGD:704372 NCBI chr 2:59,946,158...59,958,255
Ensembl chr 2:59,946,153...59,958,255
JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727), (PMID:8034703) RGD PMID:8034703 PMID:12810727 NCBI chr 5:63,851,668...63,860,641
Ensembl chr 5:63,850,705...63,860,685
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:11412116), (PMID:9660774)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9660774 PMID:11412116 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 involved_in IBA
ISO
PMID:21873635
(MGI:1859119|PMID:10748047)
(PMID:10748047)
RGD PMID:10748047 PMID:21873635 MGI:1859119, RGD:13792537 NCBI chr 9:17,230,455...17,306,775
Ensembl chr 9:17,230,455...17,306,775
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in TAS
IEA
IDA
ISO
IBA
GO_REF:0000041
PMID:1694852
(PMID:19965590)
PMID:21873635
UniProt
RGD
PMID:19965590 PMID:2335522 PMID:1694852 PMID:21873635 GO_REF:0000041, RGD:70535, RGD:70534, RGD:13792537 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 involved_in TAS
ISO
IEA
IBA
(MGI:1859119|PMID:10748047)
GO_REF:0000041
GO_REF:0000107
PMID:21873635
RGD
UniProt
Ensembl
PMID:10748047 PMID:12029625 PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:1859119, RGD:1298868, RGD:13792537 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:14643796)
(MGI:3588413|PMID:12393855)
RGD PMID:12393855 PMID:14643796 MGI:3588413 NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (MGI:1933035|PMID:11279518) RGD PMID:11279518 MGI:1933035 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
ISS
IEA
(PMID:12917011)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000041
RGD
UniProt
Ensembl
PMID:12917011 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:21,089,152...21,091,597
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO MGI:2180128 (MGI:3027293|PMID:14673138) RGD PMID:14673138 MGI:3027293 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11980911)
Ensembl
RGD
PMID:11980911 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:113,804,728...113,842,208
Ensembl chr 3:113,804,728...113,842,208
JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO
IBA
(PMID:11980911)
PMID:21873635
RGD PMID:11980911 PMID:21873635 RGD:13792537 NCBI chr 1:73,616,556...73,627,149
Ensembl chr 1:73,616,564...73,627,172
JBrowse link
G Star steroidogenic acute regulatory protein IDA RGD PMID:15382124 RGD:1600081 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
bile acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
bile acid conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baat bile acid CoA:amino acid N-acyltransferase involved_in ISO
IDA
(PMID:12810727), (PMID:2037576), (PMID:8034703)
PMID:12951368
PMID:624713
RGD PMID:2037576 PMID:8034703 PMID:12810727 PMID:12951368 PMID:624713 RGD:2312798, RGD:14695068 NCBI chr 5:63,851,668...63,860,641
Ensembl chr 5:63,850,705...63,860,685
JBrowse link
bile acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in IEA
IDA
ISO
GO_REF:0000107
PMID:9545351
(PMID:20010382), (PMID:29507376), (PMID:32203132)
Ensembl
RGD
PMID:20010382 PMID:29507376 PMID:32203132 PMID:9545351 GO_REF:0000107, RGD:728120 NCBI chr 3:54,016,854...54,112,797
Ensembl chr 3:54,017,127...54,112,730
JBrowse link
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IDA
ISO
PMID:9325339
(PMID:2318981)
RGD PMID:2318981 PMID:9325339 RGD:21201257 NCBI chr 8:119,079,401...119,088,624
Ensembl chr 8:119,079,775...119,088,624
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in ISO (PMID:8486699) RGD PMID:8486699 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326
JBrowse link
G Amacr alpha-methylacyl-CoA racemase involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:10655068)
Ensembl
RGD
PMID:10655068 PMID:8020470 GO_REF:0000107, RGD:2315634 NCBI chr 2:59,946,158...59,958,255
Ensembl chr 2:59,946,153...59,958,255
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator acts_upstream_of_or_within ISO (MGI:4849624|PMID:20663892) RGD PMID:20663892 MGI:4849624 NCBI chr19:52,692,337...52,704,156
Ensembl chr19:52,692,337...52,704,156
JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 acts_upstream_of_or_within ISO MGI:3043815 (MGI:3041693|PMID:14976163) RGD PMID:14976163 MGI:3041693 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase acts_upstream_of_or_within ISO (MGI:893269|PMID:9215542) RGD PMID:9215542 MGI:893269 NCBI chr 5:63,851,668...63,860,641
Ensembl chr 5:63,850,705...63,860,685
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP chenodeoxycholic acid RGD PMID:20026603 RGD:4890374 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in
NOT|involved_in
ISO
ISS
(PMID:17105727)
(MGI:3690511|PMID:17080196)
GO_REF:0000024
RGD
UniProt
PMID:17080196 PMID:17105727 GO_REF:0000024 MGI:3690511 NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072
JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 TAS RGD PMID:12679481 RGD:1599971 NCBI chr 1:182,411,836...182,415,447
Ensembl chr 1:182,412,151...182,415,442
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (MGI:2386518|PMID:12114517) RGD PMID:12114517 MGI:2386518 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 acts_upstream_of_or_within IDA
ISO
IMP
MGI:2679472 (MGI:2678884|PMID:12917447) RGD PMID:12917447 PMID:12754200 PMID:27993716 MGI:2678884, RGD:1625079, RGD:14701034 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 acts_upstream_of_or_within ISO MGI:3050234 (MGI:3050203|PMID:15014077) RGD PMID:15014077 MGI:3050203 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Scp2 sterol carrier protein 2 involved_in IDA PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287
JBrowse link
G Slc10a2 solute carrier family 10 member 2 TAS RGD PMID:15304498 RGD:1624187 NCBI chr16:84,386,528...84,409,475
Ensembl chr16:84,374,862...84,409,475
JBrowse link
G Slc27a5 solute carrier family 27 member 5 acts_upstream_of_or_within IMP
ISO
MGI:3757682 (MGI:3722950|PMID:16618417) RGD PMID:16618417 PMID:12454267 MGI:3722950, RGD:1302363 NCBI chr 1:73,616,556...73,627,149
Ensembl chr 1:73,616,564...73,627,172
JBrowse link
G Slco1a6 solute carrier organic anion transporter family, member 1a6 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:175,072,143...175,107,950
Ensembl chr 4:175,072,143...175,117,263
JBrowse link
G Ugt2a1 UDP glucuronosyltransferase family 2 member A1 involved_in ISO (PMID:23756265) RGD PMID:23756265 NCBI chr14:20,521,018...20,545,060
Ensembl chr14:20,517,951...20,545,531
JBrowse link
brassinosteroid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr7 7-dehydrocholesterol reductase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
JBrowse link
brexanolone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b6 hydroxysteroid (17-beta) dehydrogenase 6 involved_in ISO
ISS
(PMID:10896656), (PMID:11360992)
GO_REF:0000024
RGD
UniProt
PMID:10896656 PMID:11360992 GO_REF:0000024 NCBI chr 7:422,466...442,008
Ensembl chr 7:422,480...442,425
JBrowse link
brexanolone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
ISS
IEA
(PMID:19706438)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19706438 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,152...21,091,597
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3968063 PMID:21873635 RGD:2317678, RGD:13792537 NCBI chr12:41,493,650...41,502,897
Ensembl chr12:41,493,626...41,502,898
JBrowse link
butyrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 NOT|involved_in ISO (PMID:16940157) RGD PMID:16940157 NCBI chr 6:103,668,699...103,674,037
Ensembl chr 6:103,668,753...103,673,917
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO
ISS
(MGI:6157214|PMID:29378847)
GO_REF:0000024
RGD
UniProt
PMID:29378847 GO_REF:0000024 MGI:6157214 NCBI chr 1:88,214,475...88,226,072
Ensembl chr 1:88,214,480...88,226,207
JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) RGD PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chr19:42,125,679...42,151,198
Ensembl chr19:42,125,711...42,151,081
JBrowse link
C21-steroid hormone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
pregnenolone
(MGI:68080|PMID:7527351)
PMID:21873635
GO_REF:0000107
(PMID:11502818), (PMID:18182448), (PMID:21636783)
RGD
Ensembl
PMID:7527351 PMID:11502818 PMID:18182448 PMID:21636783 PMID:19665544 More... GO_REF:0000107 MGI:68080, RGD:4891164, RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11832364 PMID:21873635 RGD:727991, RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:2256920) RGD PMID:2256920 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
G Cyp21a1 cytochrome P450, family 21, subfamily a, polypeptide 1 IMP RGD PMID:9408081 RGD:1298842 NCBI chr20:4,020,217...4,026,923
Ensembl chr20:4,023,767...4,026,923
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 IDA RGD PMID:1985917 RGD:632871 NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852
JBrowse link
C21-steroid hormone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in ISO
IEA
(PMID:7508385)
GO_REF:0000107
RGD
Ensembl
PMID:7508385 GO_REF:0000107 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IDA 7-dehydropregnenolone RGD PMID:19190754 RGD:4889515 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 IMP RGD PMID:14563706 RGD:1599722 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12917011)
UniProt
Ensembl
RGD
PMID:12917011 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,152...21,091,597
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 involved_in IDA
IBA
7-dehydropregnenolone
PMID:21873635
RGD
GO_Central
PMID:19190754 PMID:21873635 RGD:4889515, RGD:13792537 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852
JBrowse link
G Hsd3b3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:186,138,044...186,144,024
Ensembl chr 2:186,138,044...186,144,033
JBrowse link
G Hsd3b5 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:186,008,944...186,028,417
Ensembl chr 2:186,008,943...186,020,393
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:15465040)
Ensembl
RGD
PMID:15465040 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
IBA
(PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
GO_REF:0000107
(MGI:3590419|PMID:15972816)
PMID:21873635
RGD
Ensembl
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... GO_REF:0000107 MGI:3590419, RGD:13792537 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 involved_in ISO (PMID:15465040), (PMID:18511070) RGD PMID:15465040 PMID:18511070 NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759
JBrowse link
G Cyp3a62 cytochrome P450, family 3, subfamily a, polypeptide 62 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:16,397,998...16,433,833
Ensembl chr12:16,397,998...16,433,833
JBrowse link
cardiolipin acyl-chain remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:23152787)
UniProt
RGD
PMID:23152787 GO_REF:0000024 NCBI chr 6:26,187,969...26,227,605
Ensembl chr 6:26,187,956...26,227,869
JBrowse link
G Pla2g5 phospholipase A2, group V involved_in ISS
ISO
GO_REF:0000024
(PMID:23533611)
UniProt
RGD
PMID:23533611 GO_REF:0000024 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO
IBA
IDA
ISS
(PMID:23533611)
PMID:21873635
PMID:24648512
GO_REF:0000024
RGD
UniProt
PMID:23533611 PMID:21873635 PMID:24648512 GO_REF:0000024, RGD:13792537, RGD:25671395 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Them5 thioesterase superfamily member 5 involved_in IBA
ISO
PMID:21873635
(MGI:5432849|PMID:22586271)
RGD PMID:22586271 PMID:21873635 MGI:5432849, RGD:13792537 NCBI chr 2:181,980,783...181,986,002
Ensembl chr 2:181,980,783...181,986,002
JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crls1 cardiolipin synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655
JBrowse link
G Pgs1 phosphatidylglycerophosphate synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO (PMID:19164547) RGD PMID:19164547 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO
ISS
(PMID:16939411)
GO_REF:0000024
RGD
UniProt
PMID:16939411 GO_REF:0000024 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709
JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5288296|PMID:21641550)
UniProt
RGD
PMID:21641550 GO_REF:0000024 MGI:5288296 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:19523918)
Ensembl
RGD
PMID:19523918 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:11118295), (PMID:16873891), (PMID:17043667), (PMID:19164547) RGD PMID:11118295 PMID:16873891 PMID:17043667 PMID:19164547 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694
JBrowse link
cardiolipin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137311 (MGI:3769075|PMID:17237885)
Ensembl
RGD
PMID:17237885 GO_REF:0000107 MGI:3769075 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:5917216|PMID:28442572)
(PMID:28442572)
UniProt
RGD
PMID:28442572 GO_REF:0000024 MGI:5917216 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:19700766)
(MGI:4868510|PMID:21068380), (MGI:5819036|PMID:26114544)
(PMID:26908608), (PMID:33096711)
RGD PMID:19700766 PMID:21068380 PMID:26114544 PMID:26908608 PMID:33096711 MGI:4868510 MGI:5819036 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in IBA
ISO
PMID:21873635
(MGI:1931377|PMID:11092891), (MGI:3587559|PMID:15951442)
(PMID:11401432), (PMID:17951468), (PMID:24668807)
RGD PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 More... MGI:1931377 MGI:3587559, RGD:13792537 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in IBA
ISO
PMID:21873635
(MGI:2159483|PMID:11278918), (MGI:4947204|PMID:21106934)
(PMID:21302131)
RGD PMID:11278918 PMID:21106934 PMID:21302131 PMID:21873635 PMID:21873635 MGI:2159483 MGI:4947204, RGD:13792537, RGD:13792537 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO (PMID:11278918)
(MGI:2159483|PMID:11278918)
RGD PMID:11278918 MGI:2159483 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
carotenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO (MGI:4947204|PMID:21106934) RGD PMID:21106934 MGI:4947204 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578
JBrowse link
G Chka choline kinase alpha involved_in IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516
JBrowse link
G Chkb choline kinase beta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461
JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in IDA
ISO
PMID:19783652
(MGI:2667298|PMID:12842190)
PMID:8185307
(PMID:10480912)
PMID:8381041
RGD PMID:10480912 PMID:12842190 PMID:19783652 PMID:8185307 PMID:8381041 MGI:2667298, RGD:8553740, RGD:39458015, RGD:729578 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in IEA
ISO
ISS
GO_REF:0000107
GO_REF:0000002
(MGI:2667298|PMID:12842190)
GO_REF:0000024
(PMID:10480912)
Ensembl
InterPro
RGD
UniProt
PMID:10480912 PMID:12842190 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:2667298 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935
JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,601,302...67,738,504
Ensembl chr  X:67,601,302...67,738,455
JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:48,525,131...48,633,798
Ensembl chr 1:48,527,323...48,633,345
JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:8863531)
GO_REF:0000041
(PMID:25375833), (PMID:9407135)
UniProt
RGD
PMID:8863531 PMID:9407135 PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681
JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO
ISS
IEA
(PMID:25375833)
GO_REF:0000024
GO_REF:0000041
RGD
UniProt
PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr 3:119,514,963...119,553,555
Ensembl chr 3:119,515,000...119,553,541
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639
JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051
JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:8,715,367...8,768,051
Ensembl chr14:8,714,373...8,766,490
JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694
JBrowse link
CDP-diacylglycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase IDA RGD PMID:7998949 RGD:1626301 NCBI chr 1:181,583,098...181,587,409
Ensembl chr 1:181,583,141...181,587,408
JBrowse link
cellular lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (MGI:1321427|PMID:9861014) RGD PMID:9861014 MGI:1321427 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:26506094 RGD:11251109 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4881636|PMID:20544854)
UniProt
RGD
PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 acts_upstream_of_or_within ISO (MGI:5763710|PMID:26427354) RGD PMID:26427354 MGI:5763710 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
JBrowse link
G Sirt2 sirtuin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5567909|PMID:19037106)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19037106 GO_REF:0000024 GO_REF:0000107 MGI:5567909 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
cellular lipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,422,526...25,427,514
Ensembl chr 6:25,422,526...25,427,514
JBrowse link
G Abhd15 abhydrolase domain containing 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:62,363,209...62,368,600
Ensembl chr10:62,363,209...62,368,600
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:133,217,403...133,298,564
Ensembl chr 1:133,217,375...133,299,061
JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,723,203...1,778,488
Ensembl chr18:1,720,718...1,803,428
JBrowse link
G Angptl8 angiopoietin-like 8 involved_in ISO (MGI:5440843|PMID:22809513), (MGI:5613455|PMID:24043787) RGD PMID:22809513 PMID:24043787 MGI:5440843 MGI:5613455 NCBI chr 8:20,376,462...20,378,488
Ensembl chr 8:20,376,462...20,378,490
JBrowse link
G Atf2 activating transcription factor 2 involved_in ISO
IEA
MGI:3720850 (MGI:5007596|PMID:21533046)
GO_REF:0000107
RGD
Ensembl
PMID:21533046 GO_REF:0000107 MGI:5007596 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Ccdc71 coiled-coil domain containing 71 involved_in ISO (PMID:23301040) RGD PMID:23301040 NCBI chr 8:109,146,650...109,161,749
Ensembl chr 8:109,146,359...109,165,216
JBrowse link
G Dio2 iodothyronine deiodinase 2 acts_upstream_of_or_within ISO MGI:5513859 (MGI:6278316|PMID:29320745) RGD PMID:29320745 MGI:6278316 NCBI chr 6:109,665,523...109,679,809
Ensembl chr 6:109,665,523...109,679,809
JBrowse link
G Fam135a family with sequence similarity 135, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:26,420,116...26,500,803
Ensembl chr 9:26,420,528...26,500,717
JBrowse link
G Fam135b family with sequence similarity 135, member B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:103,380,981...103,649,802
Ensembl chr 7:103,386,915...103,649,708
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 acts_upstream_of_or_within ISO MGI:3530363 (MGI:3528799|PMID:15654325) RGD PMID:15654325 MGI:3528799 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500
JBrowse link
G Lpin1 lipin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3799353 (MGI:5311965|PMID:22337502)
RGD PMID:22337502 PMID:21873635 MGI:5311965, RGD:13792537 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
JBrowse link
G Lpin2 lipin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:111,083,378...111,158,193
Ensembl chr 9:111,083,745...111,158,193
JBrowse link
G Lpin3 lipin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,533,719...149,558,494
Ensembl chr 3:149,534,051...149,558,327
JBrowse link
G Mtln mitoregulin involved_in ISO (MGI:6283949|PMID:30796188) RGD PMID:30796188 MGI:6283949 NCBI chr 3:115,018,810...115,019,668 JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 acts_upstream_of_or_within ISO (MGI:3038048|PMID:14739254) RGD PMID:14739254 MGI:3038048 NCBI chr 1:95,041,967...95,047,377
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 acts_upstream_of_or_within ISO (MGI:3038048|PMID:14739254) RGD PMID:14739254 MGI:3038048 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2384516 (MGI:3623834|PMID:16484321) RGD PMID:16484321 MGI:3623834 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in ISO
IBA
(PMID:27374330)
(MGI:5796058|PMID:27374330)
PMID:21873635
RGD PMID:27374330 PMID:21873635 MGI:5796058, RGD:13792537 NCBI chr13:43,237,954...43,259,999
Ensembl chr13:43,237,971...43,259,999
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:2447704 (MGI:5311965|PMID:22337502) RGD PMID:22337502 MGI:5311965 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO MGI:2148743 (MGI:5311965|PMID:22337502) RGD PMID:22337502 MGI:5311965 NCBI chr 8:110,306,031...110,360,677
Ensembl chr 8:110,306,031...110,360,666
JBrowse link
G Star steroidogenic acute regulatory protein acts_upstream_of_or_within ISO MGI:2388706 (MGI:1098076|PMID:9326645) RGD PMID:9326645 MGI:1098076 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Zfp870 zinc finger protein 870 acts_upstream_of_or_within ISO (PMID:29320745) RGD PMID:29320745 NCBI chr 7:11,990,146...12,003,813
Ensembl chr 7:11,990,148...12,003,813
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:2178865|PMID:11923874) RGD PMID:11923874 MGI:2178865 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agk acylglycerol kinase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3054595|PMID:15252046)
RGD PMID:15252046 PMID:21873635 MGI:3054595, RGD:13792537 NCBI chr 4:69,114,850...69,193,989
Ensembl chr 4:69,114,269...69,193,934
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3789553|PMID:17403930)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17403930 GO_REF:0000024 GO_REF:0000107 MGI:3789553 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5488571|PMID:22832496)
UniProt
RGD
PMID:22832496 GO_REF:0000024 MGI:5488571 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO
IEA
ISS
(PMID:12764132), (PMID:12815059)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12764132 PMID:12815059 GO_REF:0000024 GO_REF:0000107 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO
IDA
(PMID:11278489), (PMID:17475390)
(MGI:6274955|PMID:21613224)
PMID:15123644
RGD PMID:11278489 PMID:17475390 PMID:21613224 PMID:15123644 PMID:11278489 MGI:6274955, RGD:13838793, RGD:13838803 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:12105227), (PMID:12869556), (PMID:15823095), (PMID:17548428), (PMID:18541923), (PMID:22922758), (PMID:24782409)
(MGI:3696321|PMID:16951403), (MGI:3764760|PMID:17977534), (MGI:5008665|PMID:21625621), (MGI:5755322|PMID:26620563), (MGI:6380950|PMID:30605666)
RGD PMID:12105227 PMID:12869556 PMID:15823095 PMID:16951403 PMID:17548428 More... MGI:3696321 MGI:3764760 MGI:5008665 MGI:5755322 MGI:6380950 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
JBrowse link
G Cers2 ceramide synthase 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17977534), (PMID:18165233), (PMID:29632068)
(MGI:4421488|PMID:19801672), (MGI:5755322|PMID:26620563)
PMID:21873635
(MGI:3696894|PMID:15823095)
RGD PMID:15823095 PMID:17977534 PMID:18165233 PMID:19801672 PMID:26620563 More... MGI:3696894 MGI:4421488 MGI:5755322, RGD:13792537 NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
JBrowse link
G Cers3 ceramide synthase 3 involved_in ISO
IBA
(PMID:17977534), (PMID:22038835), (PMID:23754960)
PMID:21873635
(MGI:5303015|PMID:22038835)
RGD PMID:17977534 PMID:22038835 PMID:23754960 PMID:21873635 MGI:5303015, RGD:13792537 NCBI chr 1:120,316,930...120,422,926
Ensembl chr 1:120,318,212...120,422,902
JBrowse link
G Cers4 ceramide synthase 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17977534), (PMID:29632068)
PMID:21873635
(MGI:2679796|PMID:12912983), (MGI:3696894|PMID:15823095)
RGD PMID:12912983 PMID:15823095 PMID:17977534 PMID:29632068 PMID:21873635 MGI:2679796 MGI:3696894, RGD:13792537 NCBI chr12:2,851,784...2,890,244
Ensembl chr12:2,851,784...2,886,828
JBrowse link
G Cers5 ceramide synthase 5 involved_in ISO
IBA
(PMID:16951403), (PMID:29632068)
PMID:21873635
(MGI:3696624|PMID:16100120), (MGI:3722529|PMID:17609214), (MGI:3764760|PMID:17977534)
RGD PMID:16100120 PMID:16951403 PMID:17609214 PMID:17977534 PMID:29632068 More... MGI:3696624 MGI:3722529 MGI:3764760, RGD:13792537 NCBI chr 7:130,859,993...130,897,979
Ensembl chr 7:130,859,990...130,897,947
JBrowse link
G Cers6 ceramide synthase 6 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17609214), (PMID:17977534)
PMID:21873635
(MGI:5513027|PMID:23760501), (MGI:5755322|PMID:26620563)
(MGI:3696894|PMID:15823095)
RGD PMID:15823095 PMID:17609214 PMID:17977534 PMID:23760501 PMID:26620563 More... MGI:3696894 MGI:5513027 MGI:5755322, RGD:13792537 NCBI chr 3:53,630,636...53,879,692
Ensembl chr 3:53,630,959...53,876,848
JBrowse link
G Cyp4f39 cytochrome P450, family 4, subfamily f, polypeptide 39 involved_in IBA
ISO
PMID:21873635
(PMID:26056268)
RGD PMID:26056268 PMID:21873635 RGD:13792537 NCBI chr 7:11,426,806...11,505,553
Ensembl chr 7:11,433,371...11,536,181
JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3529540 (MGI:5466789|PMID:22984457)
RGD PMID:22984457 PMID:21873635 MGI:5466789, RGD:13792537 NCBI chr13:93,946,154...93,953,677
Ensembl chr13:93,946,157...93,953,664
JBrowse link
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3694278|PMID:16571104)
RGD PMID:16571104 PMID:21873635 MGI:3694278, RGD:13792537 NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO (MGI:5532629|PMID:23689133) RGD PMID:23689133 MGI:5532629 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISO
ISS
(PMID:15337768)
(MGI:6245295|PMID:22517924)
GO_REF:0000024
RGD
UniProt
PMID:15337768 PMID:22517924 GO_REF:0000024 MGI:6245295 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (PMID:19279011) RGD PMID:19279011 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G LOC498300 similar to degenerative spermatocyte homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,772,654...92,818,811
Ensembl chr13:92,772,649...92,818,574
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO (MGI:3640029|PMID:16325464) RGD PMID:16325464 MGI:3640029 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (MGI:3640029|PMID:16325464) RGD PMID:16325464 MGI:3640029 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Pnpla1 patatin-like phospholipase domain containing 1 involved_in ISO (PMID:27751867)
(MGI:5882269|PMID:27751867)
RGD PMID:27751867 MGI:5882269 NCBI chr20:6,918,446...6,951,650
Ensembl chr20:6,917,931...6,952,375
JBrowse link
G RGD1564463 similar to Mdes protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,831,549...92,839,257
Ensembl chr13:92,831,537...92,839,246
JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5749225 (MGI:5632043|PMID:25605874), (MGI:5707904|PMID:25667419)
(PMID:19506037)
RGD PMID:19506037 PMID:25605874 PMID:25667419 PMID:21873635 MGI:5632043 MGI:5707904, RGD:13792537 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379
JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25605874)
(MGI:5632043|PMID:25605874)
RGD PMID:25605874 PMID:21873635 MGI:5632043, RGD:13792537 NCBI chr 1:229,996,673...230,259,591
Ensembl chr 1:229,998,119...230,259,603
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:4818459 (MGI:5632043|PMID:25605874)
PMID:21873635
Ensembl
RGD
PMID:25605874 PMID:21873635 GO_REF:0000107 MGI:5632043, RGD:13792537 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IMP
ISO
IBA
(MGI:82530|PMID:8706124)
(PMID:17303575), (PMID:18815062), (PMID:19279011), (PMID:20807762), (PMID:8706124)
PMID:21873635
RGD PMID:8706124 PMID:17303575 PMID:18815062 PMID:19279011 PMID:20807762 More... MGI:82530, RGD:1601344, RGD:13792537 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12473648 PMID:21873635 RGD:1581395, RGD:13792537 NCBI chr20:44,986,229...44,989,343
Ensembl chr20:44,986,231...44,989,441
JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in ISO
IBA
(PMID:16517606), (PMID:25180167)
(MGI:6450503|PMID:25180167)
PMID:21873635
RGD PMID:16517606 PMID:25180167 PMID:21873635 MGI:6450503, RGD:13792537 NCBI chr11:83,362,534...83,386,257
Ensembl chr11:83,362,534...83,386,250
JBrowse link
G Smpd5 sphingomyelin phosphodiesterase 5 involved_in ISO (MGI:6450238|PMID:21183079) RGD PMID:21183079 MGI:6450238 NCBI chr 7:108,009,182...108,011,767
Ensembl chr 7:108,009,173...108,011,763
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
MGI:3815115 (MGI:3814228|PMID:16216550)
RGD PMID:16216550 PMID:25691431 PMID:21873635 MGI:3814228, RGD:13792537 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
MGI:3815117 (MGI:3814228|PMID:16216550)
RGD PMID:16216550 PMID:25691431 PMID:21873635 MGI:3814228, RGD:13792537 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
RGD PMID:25691431 PMID:21873635 RGD:13792537 NCBI chr 6:72,144,714...72,156,130
Ensembl chr 6:72,144,714...72,156,214
JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5689843 (MGI:5689923|PMID:26438849)
RGD PMID:26438849 PMID:21873635 MGI:5689923, RGD:13792537 NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120
JBrowse link
G Tlcd3b TLC domain containing 3B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5490837|PMID:23275342)
RGD PMID:23275342 PMID:21873635 MGI:5490837, RGD:13792537 NCBI chr 1:181,421,104...181,439,744
Ensembl chr 1:181,422,830...181,439,743
JBrowse link
ceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:20207939)
(MGI:2670497|PMID:12783875)
(MGI:5800647|PMID:27126290)
RGD PMID:12783875 PMID:20207939 PMID:27126290 MGI:2670497 MGI:5800647 NCBI chr 9:1,792,790...1,824,434
Ensembl chr 9:1,793,139...1,824,434
JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:16940153), (PMID:20207939) RGD PMID:16940153 PMID:20207939 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614
JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:20207939), (PMID:26792856), (PMID:30575723)
(MGI:5749603|PMID:26474409)
RGD PMID:20207939 PMID:26474409 PMID:26792856 PMID:30575723 MGI:5749603 NCBI chr 1:152,504,180...152,606,596
Ensembl chr 1:152,504,186...152,606,591
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:1267186|PMID:9653654), (MGI:5505361|PMID:23770692)
(PMID:10610716), (PMID:12815059)
UniProt
Ensembl
RGD
PMID:9653654 PMID:10610716 PMID:12815059 PMID:23770692 GO_REF:0000024 GO_REF:0000107 MGI:1267186 MGI:5505361 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IDA
ISO
IBA
PMID:15123644
(MGI:3608219|PMID:16126722), (MGI:3640407|PMID:16380386), (MGI:6275120|PMID:10652340)
PMID:15217782
PMID:21873635
(PMID:10781606), (PMID:15946935), (PMID:16229686), (PMID:17475390), (PMID:19345744), (PMID:30154232)
PMID:10488143
RGD PMID:10652340 PMID:10781606 PMID:15946935 PMID:16126722 PMID:16229686 More... MGI:3608219 MGI:3640407 MGI:6275120, RGD:13838793, RGD:13838794, RGD:13792537, RGD:13838800 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Cel carboxyl ester lipase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180867 (MGI:2158596|PMID:11733511)
Ensembl
RGD
PMID:11733511 GO_REF:0000107 MGI:2158596 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
ceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 involved_in ISO (PMID:17927575)
(MGI:4462766|PMID:20489143)
RGD PMID:17927575 PMID:20489143 MGI:4462766 NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:26190575)
UniProt
RGD
PMID:26190575 GO_REF:0000024 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Cerk ceramide kinase involved_in ISO
IBA
(PMID:19501188)
PMID:21873635
RGD PMID:19501188 PMID:21873635 RGD:13792537 NCBI chr 7:117,225,855...117,269,436
Ensembl chr 7:117,225,855...117,268,759
JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within ISO MGI:3837565 (MGI:3836857|PMID:19139267) RGD PMID:19139267 MGI:3836857 NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein involved_in ISS
ISO
GO_REF:0000024
(PMID:16086686)
UniProt
RGD
PMID:16086686 GO_REF:0000024 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
JBrowse link
G Fut7 fucosyltransferase 7 involved_in ISO (PMID:9299472) RGD PMID:9299472 NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260
JBrowse link
G Htra2 HtrA serine peptidase 2 IEP C2 ceramide RGD PMID:22296759 RGD:5688365 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
JBrowse link
G LOC367454 similar to Alpha-(1,3)-fucosyltransferase (Galactoside 3-L-fucosyltransferase) (Fucosyltransferase 6) (FUCT-VI) involved_in ISO (PMID:17604274) RGD PMID:17604274 NCBI chr 9:1,569,605...1,572,022 JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IBA
ISO
PMID:21873635
(PMID:20182505)
RGD PMID:20182505 PMID:21873635 RGD:13792537 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211
JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in ISO
IBA
(PMID:20182505)
PMID:21873635
RGD PMID:20182505 PMID:21873635 RGD:13792537 NCBI chr 7:1,247,869...1,250,999
Ensembl chr 7:1,246,479...1,250,907
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in ISO
IEA
IBA
ISS
(PMID:20182505)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20182505 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
PMID:15294901
PMID:21873635
(MGI:3694368|PMID:16837646), (MGI:4820669|PMID:20410020)
(MGI:2176649|PMID:11790796)
(PMID:20410020), (PMID:29724779)
RGD PMID:11790796 PMID:16837646 PMID:20410020 PMID:29724779 PMID:15294901 More... MGI:2176649 MGI:3694368 MGI:4820669, RGD:1304489, RGD:13792537 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in IDA
IEA
ISO
PMID:8663293
GO_REF:0000107
(MGI:6383560|PMID:10359651)
(PMID:9305923), (PMID:9705349)
Ensembl
RGD
PMID:9305923 PMID:9705349 PMID:10359651 PMID:8663293 PMID:10359651 GO_REF:0000107 MGI:6383560, RGD:15090855, RGD:15090857 NCBI chr 2:44,439,002...44,500,430
Ensembl chr 2:44,438,994...44,501,268
JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:9705349)
UniProt
RGD
PMID:9705349 GO_REF:0000024 NCBI chr 7:10,175,918...10,184,032
Ensembl chr 7:10,175,948...10,184,071
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:9305923), (PMID:9705349)
UniProt
RGD
PMID:9305923 PMID:9705349 GO_REF:0000024 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:3521746 (MGI:3512714|PMID:15345707), (MGI:3711591|PMID:17353235) RGD PMID:15345707 PMID:17353235 MGI:3512714 MGI:3711591 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in ISO
ISS
(PMID:14570870)
GO_REF:0000024
RGD
UniProt
PMID:14570870 GO_REF:0000024 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within ISO MGI:2183206 (MGI:5448760|PMID:23046545) RGD PMID:23046545 MGI:5448760 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5320806|PMID:22383528), (MGI:5448760|PMID:23046545)
Ensembl
RGD
PMID:22383528 PMID:23046545 GO_REF:0000107 MGI:5320806 MGI:5448760 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
G Smpd5 sphingomyelin phosphodiesterase 5 acts_upstream_of_or_within ISO (MGI:4833930|PMID:20378533) RGD PMID:20378533 MGI:4833930 NCBI chr 7:108,009,182...108,011,767
Ensembl chr 7:108,009,173...108,011,763
JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:30660999) RGD PMID:30660999 NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049
JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) RGD PMID:25667419 MGI:5707904 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5707904|PMID:25667419)
Ensembl
RGD
PMID:25667419 GO_REF:0000107 MGI:5707904 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07021955.1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G AABR07028137.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07028157.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07060293.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:67,330,588...67,331,346 JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821
JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2180783 (MGI:2180727|PMID:8647961)
RGD PMID:8647961 PMID:21873635 MGI:2180727, RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa4 apolipoprotein A4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:11015575) RGD PMID:11015575 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856709 (MGI:3709533|PMID:17085523)
Ensembl
RGD
PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Cyb5r3 cytochrome b5 reductase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:114,306,686...114,324,247
Ensembl chr 7:114,306,685...114,324,298
JBrowse link
G Dhcr24 24-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:11519011)
MGI:3027024 (MGI:2686848|PMID:14684813), (MGI:3624168|PMID:16321981), (MGI:3769949|PMID:16513830)
UniProt
RGD
PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000024 MGI:2686848 MGI:3624168 MGI:3769949 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137
JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in TAS
IBA
IEA
ISO
IMP
IC
IDA
PMID:21873635
GO_REF:0000041
(PMID:9465114)
UniProt
RGD
PMID:9465114 PMID:12031495 PMID:21873635 PMID:9831636 PMID:10666310 More... GO_REF:0000041, RGD:625561, RGD:13792537, RGD:2316918, RGD:2316916, RGD:632010 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in IDA
ISO
IBA
IEA
TAS
(PMID:9894009)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:9894009 PMID:11171067 PMID:21873635 PMID:11171067 GO_REF:0000041, RGD:628445, RGD:13792537, RGD:628445 NCBI chr  X:14,299,427...14,305,826
Ensembl chr  X:14,299,448...14,305,826
JBrowse link
G Fdft1 farnesyl diphosphate farnesyl transferase 1 involved_in TAS
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:1400448 PMID:21873635 PMID:16440058 RGD:728402, RGD:13792537, RGD:1626611 NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287
JBrowse link
G Fdps farnesyl diphosphate synthase TAS RGD PMID:1321149 RGD:728501 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) RGD PMID:12027950 NCBI chr  X:152,201,081...152,220,863
Ensembl chr  X:152,201,098...152,220,801
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
ISO (PMID:23063590)
(MGI:2180727|PMID:8647961), (MGI:3603484|PMID:15845870), (MGI:70238|PMID:7798939)
RGD PMID:7798939 PMID:8647961 PMID:15845870 PMID:23063590 MGI:2180727 MGI:3603484 MGI:70238 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
IEA
(PMID:12829805)
(MGI:2673751|PMID:12829805)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12829805 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:2673751, RGD:13792537 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in TAS
IEA
GO_REF:0000043 UniProt
RGD
PMID:9228075 GO_REF:0000043, RGD:729078 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357
JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1920249 (MGI:3689278|PMID:16955138)
(PMID:32322062)
RGD PMID:16955138 PMID:32322062 PMID:21873635 MGI:3689278, RGD:13792537 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:1916289 (MGI:3689278|PMID:16955138)
PMID:21873635
(PMID:32322062)
UniProt
RGD
PMID:16955138 PMID:32322062 PMID:21873635 GO_REF:0000024 MGI:3689278, RGD:13792537 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923
JBrowse link
G Lbr lamin B receptor involved_in ISO
IEA
ISS
(PMID:16784888), (PMID:27336722)
(MGI:3822946|PMID:18785926), (MGI:5308142|PMID:22140257)
GO_REF:0000041
GO_REF:0000024
RGD
UniProt
PMID:16784888 PMID:18785926 PMID:22140257 PMID:27336722 GO_REF:0000024 GO_REF:0000041 MGI:3822946 MGI:5308142 NCBI chr13:93,539,360...93,564,065 JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015
JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,420,357...61,423,924 JBrowse link
G LOC291276 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,549,335...61,553,178 JBrowse link
G Lss lanosterol synthase involved_in IMP
IDA
IBA
ISO
IEA
PMID:7568116
PMID:21873635
(PMID:17186944)
GO_REF:0000107
RGD
Ensembl
PMID:17186944 PMID:16440058 PMID:7568116 PMID:21873635 PMID:1429550 GO_REF:0000107, RGD:1626611, RGD:728996, RGD:13792537, RGD:2316919 NCBI chr20:12,091,138...12,118,858
Ensembl chr20:12,092,774...12,118,762
JBrowse link
G Msmo1 methylsterol monooxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:24,980,680...24,997,927
Ensembl chr16:24,980,697...24,998,016
JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in NAS
IEA
GO_REF:0000041 UniProt
RGD
PMID:11767099 GO_REF:0000041, RGD:729305 NCBI chr19:50,496,366...50,506,389
Ensembl chr19:50,496,367...50,507,971
JBrowse link
G Mvk mevalonate kinase involved_in TAS
IEA
IBA
ISO
GO_REF:0000043
GO_REF:0000107
PMID:21873635
(PMID:1377680)
UniProt
Ensembl
RGD
PMID:1377680 PMID:2158094 PMID:21873635 GO_REF:0000043 GO_REF:0000107, RGD:728935, RGD:13792537 NCBI chr12:42,141,391...42,158,858
Ensembl chr12:42,141,384...42,158,882
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142
JBrowse link
G Pmvk phosphomevalonate kinase involved_in IBA
NAS
ISO
PMID:21873635
PMID:10191291
(PMID:8663599)
RGD PMID:8663599 PMID:21873635 PMID:10191291 RGD:13792537, RGD:8553625 NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,372,853...61,386,459 JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA
ISO
IDA
GO_REF:0000041
(MGI:3822946|PMID:18785926)
PMID:16784888
(PMID:16784888)
UniProt
RGD
PMID:16784888 PMID:18785926 PMID:16784888 GO_REF:0000041 MGI:3822946, RGD:13825441 NCBI chr 1:203,355,930...203,360,287
Ensembl chr 1:203,355,931...203,360,270
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp51 cytochrome P450, family 51 IDA RGD PMID:7581240 RGD:2316902 NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) RGD PMID:11519011 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sc5d sterol-C5-desaturase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7961720 PMID:21873635 RGD:2316911, RGD:13792537 NCBI chr 8:42,629,649...42,641,257
Ensembl chr 8:42,632,672...42,641,273
JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in ISO
IEA
(PMID:7508385)
GO_REF:0000107
RGD
Ensembl
PMID:7508385 GO_REF:0000107 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1314982|PMID:9826706)
RGD PMID:9826706 PMID:21873635 MGI:1314982, RGD:13792537 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Cel carboxyl ester lipase involved_in ISO
IEA
(PMID:12031288)
GO_REF:0000107
RGD
Ensembl
PMID:12031288 GO_REF:0000107 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
GO_REF:0000041
(PMID:9660774)
UniProt
Ensembl
RGD
PMID:9660774 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO (MGI:1859119|PMID:10748047) RGD PMID:10748047 MGI:1859119 NCBI chr 9:17,230,455...17,306,775
Ensembl chr 9:17,230,455...17,306,775
JBrowse link
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 involved_in IBA
ISO
PMID:21873635
(MGI:1339884|PMID:10377398), (MGI:6393037|PMID:20193040)
(PMID:14640697), (PMID:18621681), (PMID:25017465)
RGD PMID:10377398 PMID:14640697 PMID:18621681 PMID:20193040 PMID:25017465 More... MGI:1339884 MGI:6393037, RGD:13792537 NCBI chr 6:127,243,315...127,274,765
Ensembl chr 6:127,243,315...127,274,760
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IEA
PMID:1694852
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870)
GO_REF:0000041
RGD
UniProt
PMID:11279518 PMID:15845870 PMID:1694852 GO_REF:0000041 MGI:1933035 MGI:3603484, RGD:70534 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IDA RGD PMID:16081591 RGD:1599972 NCBI chr 1:182,411,836...182,415,447
Ensembl chr 1:182,412,151...182,415,442
JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4881636|PMID:20544854)
UniProt
RGD
PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Scarb1 scavenger receptor class B, member 1 acts_upstream_of_or_within ISO MGI:1928989 (MGI:1934548|PMID:11278646), (MGI:3690692|PMID:10559220) RGD PMID:10559220 PMID:11278646 MGI:1934548 MGI:3690692 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
cholesterol esterification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin cholesterol acyltransferase involved_in ISS
ISO
GO_REF:0000024
(PMID:24620755), (PMID:26195816), (PMID:3458198), (PMID:4335615)
UniProt
RGD
PMID:3458198 PMID:4335615 PMID:24620755 PMID:26195816 GO_REF:0000024 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231
JBrowse link
G Scd stearoyl-CoA desaturase involved_in ISO (MGI:1889921|PMID:10899171) RGD PMID:10899171 MGI:1889921 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Soat1 sterol O-acyltransferase 1 involved_in ISO
IBA
ISS
IEA
(PMID:16647063), (PMID:32433613), (PMID:32433614), (PMID:8407899)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8407899 PMID:16647063 PMID:32433613 PMID:32433614 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494
JBrowse link
G Soat2 sterol O-acyltransferase 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000107
(PMID:11294643), (PMID:16647063)
UniProt
Ensembl
RGD
PMID:11294643 PMID:16647063 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:133,281,818...133,294,915
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO (MGI:5295922|PMID:21767660) RGD PMID:21767660 MGI:5295922 NCBI chr18:24,814,683...24,830,024
Ensembl chr18:24,817,107...24,830,024
JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07070085.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747463)
(MGI:2153573|PMID:11559713)
RGD PMID:11559713 PMID:14747463 MGI:2153573 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25125465)
UniProt
Ensembl
RGD
PMID:25125465 GO_REF:0000024 GO_REF:0000107 NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Angptl3 angiopoietin-like 3 involved_in ISO (PMID:17110602) RGD PMID:17110602 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88059 (MGI:3762423|PMID:17920016) RGD PMID:17920016 MGI:3762423 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855
JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
ISO (PMID:15464323)
MGI:104663|MGI:104993|MGI:1857127 (MGI:1099137|PMID:9327769), (MGI:1339278|PMID:10357841), (MGI:3487338|PMID:15466405), (MGI:3588626|PMID:15995171), (MGI:3688492|PMID:9795222), (MGI:3696597|PMID:17071966), (MGI:70854|PMID:7751823)
RGD PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15464323 More... MGI:1099137 MGI:1339278 MGI:3487338 MGI:3588626 MGI:3688492 MGI:3696597 MGI:70854 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa2 apolipoprotein A2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2157148|MGI:96216 (MGI:1339279|PMID:10357838), (MGI:2180727|PMID:8647961)
RGD PMID:8647961 PMID:10357838 PMID:21873635 MGI:1339279 MGI:2180727, RGD:13792537 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoa4 apolipoprotein A4 involved_in IEA
ISO
GO_REF:0000107
(PMID:1935934)
Ensembl
RGD
PMID:1935934 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apob apolipoprotein B involved_in ISO (PMID:2563166) RGD PMID:2563166 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Apoc1 apolipoprotein C1 acts_upstream_of_or_within ISO MGI:2157218 (MGI:70746|PMID:7848292) RGD PMID:7848292 MGI:70746 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
G Apoc3 apolipoprotein C3 acts_upstream_of_or_within ISO MGI:1857128|MGI:3758464 (MGI:2152463|PMID:11590213), (MGI:69667|PMID:8089130), (MGI:82330|PMID:8864964) RGD PMID:8089130 PMID:8864964 PMID:11590213 MGI:2152463 MGI:69667 MGI:82330 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137814 (MGI:2180727|PMID:8647961), (MGI:51330|PMID:1423598)
(PMID:3771793), (PMID:9649566)
Ensembl
RGD
PMID:1423598 PMID:3771793 PMID:8647961 PMID:9649566 GO_REF:0000107 MGI:2180727 MGI:51330 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Apof apolipoprotein F involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3800154 (MGI:5428098|PMID:22363685)
RGD PMID:22363685 PMID:21873635 MGI:5428098, RGD:13792537 NCBI chr 7:700,688...702,130
Ensembl chr 7:700,762...701,946
JBrowse link
G Apon apolipoprotein N involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:686,943...688,346
Ensembl chr 7:686,927...688,392
JBrowse link
G App amyloid beta precursor protein acts_upstream_of_or_within ISO MGI:2136847|MGI:88047 (MGI:3762423|PMID:17920016) RGD PMID:17920016 MGI:3762423 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Cat catalase acts_upstream_of_or_within ISO MGI:3053604 (MGI:53683|PMID:5087482) RGD PMID:5087482 MGI:53683 NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3848341 (MGI:3847596|PMID:18974039)
Ensembl
RGD
PMID:18974039 GO_REF:0000107 MGI:3847596 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:16024911) RGD PMID:16024911 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Ch25h cholesterol 25-hydroxylase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:33239446)
(MGI:1316846|PMID:9852097)
RGD PMID:9852097 PMID:33239446 PMID:21873635 MGI:1316846, RGD:13792537 NCBI chr 1:232,014,877...232,016,195
Ensembl chr 1:232,014,880...232,016,195
JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:16857350) RGD PMID:16857350 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein involved_in ISS
ISO
GO_REF:0000024
(PMID:16086686)
UniProt
RGD
PMID:16086686 GO_REF:0000024 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
JBrowse link
G Cubn cubilin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in IBA
ISO
ISS
IEA
PMID:21873635
(PMID:18182448), (PMID:21636783)
GO_REF:0000024
GO_REF:0000041
RGD
UniProt
PMID:18182448 PMID:21636783 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:2175615 PMID:21873635 RGD:1299597, RGD:13792537 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 TAS RGD PMID:12029625 RGD:1298868 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO MGI:3027024 (MGI:3614236|PMID:16407971) RGD PMID:16407971 MGI:3614236 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137
JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in ISO (PMID:10391219) RGD PMID:10391219 NCBI chr  X:14,299,427...14,305,826
Ensembl chr  X:14,299,448...14,305,826
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:65,017,654...65,034,184
Ensembl chr16:65,018,532...65,033,671
JBrowse link
G Fdx1 ferredoxin 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21636783)
Ensembl
UniProt
RGD
PMID:21636783 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:52,268,536...52,287,414
JBrowse link
G Fdxr ferredoxin reductase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:100,507,863...100,516,649
Ensembl chr10:100,507,865...100,516,658
JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:1858114 (MGI:1930023|PMID:11160364) RGD PMID:11160364 MGI:1930023 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Fgl1 fibrinogen-like 1 acts_upstream_of_or_within ISO MGI:5510996 (MGI:5505372|PMID:23483972) RGD PMID:23483972 MGI:5505372 NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093
JBrowse link
G Gba glucosylceramidase beta involved_in ISO
IEA
(PMID:24211208), (PMID:26724485)
(MGI:6271235|PMID:24211208)
GO_REF:0000041
RGD
UniProt
PMID:24211208 PMID:26724485 GO_REF:0000041 MGI:6271235 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA
ISO
ISS
GO_REF:0000041
(MGI:5771619|PMID:26724485)
GO_REF:0000024
UniProt
RGD
PMID:26724485 GO_REF:0000024 GO_REF:0000041 MGI:5771619 NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072
JBrowse link
G Hdlbp high density lipoprotein binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:93,948,099...94,018,040
Ensembl chr 9:93,949,913...94,018,048
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (MGI:1933035|PMID:11279518) RGD PMID:11279518 MGI:1933035 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 NAS RGD PMID:8913347 RGD:632889 NCBI chr18:43,328,903...43,417,950
Ensembl chr18:43,328,824...43,417,952
JBrowse link
G Il4 interleukin 4 involved_in ISO (MGI:2178917|PMID:11971948) RGD PMID:11971948 MGI:2178917 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923
JBrowse link
G Lcat lecithin cholesterol acyltransferase acts_upstream_of_or_within
involved_in
IDA
ISO
(PMID:10559507)
(PMID:26195816), (PMID:4335615)
(MGI:1096057|PMID:9300780)
RGD PMID:4335615 PMID:9300780 PMID:10559507 PMID:26195816 PMID:746355 MGI:1096057, RGD:1581789 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231
JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857212 (MGI:3696597|PMID:17071966)
Ensembl
RGD
PMID:17071966 GO_REF:0000107 MGI:3696597 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:146,955,607...146,978,601
Ensembl chr 5:146,955,607...146,978,601
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO MGI:88049 (MGI:3588626|PMID:15995171) RGD PMID:15995171 MGI:3588626 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepr leptin receptor acts_upstream_of_or_within ISO MGI:88049 (MGI:3588626|PMID:15995171) RGD PMID:15995171 MGI:3588626 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:130,901,717...131,001,573
Ensembl chr 7:130,901,717...131,001,473
JBrowse link
G Lipc lipase C, hepatic type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88050 (MGI:1339279|PMID:10357838)
Ensembl
RGD
PMID:10357838 GO_REF:0000107 MGI:1339279 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310
JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within ISO MGI:2177650|MGI:2180880 (MGI:3762423|PMID:17920016) RGD PMID:17920016 MGI:3762423 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO MGI:2448955 (MGI:2448205|PMID:12509515) RGD PMID:12509515 MGI:2448205 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Mbtps1 membrane-bound transcription factor peptidase, site 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,561,598...47,612,769
Ensembl chr19:47,561,598...47,612,791
JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857776 (MGI:1338572|PMID:10369263)
RGD PMID:10369263 PMID:21873635 MGI:1338572, RGD:13792537 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 acts_upstream_of_or_within ISO (MGI:3710922|PMID:17242417) RGD PMID:17242417 MGI:3710922 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
JBrowse link
G Pctp phosphatidylcholine transfer protein acts_upstream_of_or_within ISO MGI:2673156 (MGI:3603484|PMID:15845870) RGD PMID:15845870 MGI:3603484 NCBI chr10:74,808,887...74,856,260
Ensembl chr10:74,808,887...74,849,867
JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 involved_in ISO
ISS
(PMID:25035345)
GO_REF:0000024
RGD
UniProt
PMID:25035345 GO_REF:0000024 NCBI chr15:24,146,854...24,150,739
Ensembl chr15:24,146,856...24,150,702
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:5616959|PMID:25429154) RGD PMID:25429154 MGI:5616959 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Pon1 paraoxonase 1 acts_upstream_of_or_within ISO MGI:2148702 (MGI:1860864|PMID:9685159) RGD PMID:9685159 MGI:1860864 NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
JBrowse link
G Scap SREBF chaperone involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:1934968|PMID:11358865)
UniProt
RGD
PMID:11358865 GO_REF:0000024 MGI:1934968 NCBI chr 8:110,306,031...110,360,677
Ensembl chr 8:110,306,031...110,360,666
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within ISO (MGI:5320806|PMID:22383528) RGD PMID:22383528 MGI:5320806 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Soat1 sterol O-acyltransferase 1 acts_upstream_of_or_within
involved_in
TAS
ISO
ISS
IBA
IEA
(PMID:9756919)
(PMID:16647063), (PMID:8407899)
(MGI:3603484|PMID:15845870)
GO_REF:0000024
PMID:21873635
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8407899 PMID:9756919 PMID:15845870 PMID:16647063 PMID:9555010 More... GO_REF:0000024 GO_REF:0000107 MGI:3603484, RGD:730254, RGD:13792537 NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494
JBrowse link
G Soat2 sterol O-acyltransferase 2 acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
IBA
(MGI:1206070|PMID:9756919)
GO_REF:0000107
PMID:21873635
(PMID:11294643), (PMID:16647063)
RGD
Ensembl
PMID:9756919 PMID:11294643 PMID:16647063 PMID:12217884 PMID:21873635 GO_REF:0000107 MGI:1206070, RGD:625687, RGD:13792537 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:133,281,818...133,294,915
JBrowse link
G Sqle squalene epoxidase involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:9300786 PMID:21873635 RGD:1625701, RGD:13792537 NCBI chr 7:90,867,973...90,883,623
Ensembl chr 7:90,868,011...90,883,618
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IMP RGD PMID:18071061 RGD:1643359 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Srebf1_v2 sterol regulatory element binding factor 1, variant 2 IMP RGD PMID:18071061 RGD:1643359
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Sult1c3 sulfotransferase family 1C member 3 involved_in ISO (PMID:28992322) RGD PMID:28992322 NCBI chr 9:7,221,580...7,266,991
Ensembl chr 9:7,221,578...7,267,030
JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19589875)
UniProt
RGD
PMID:19589875 GO_REF:0000024 NCBI chr 1:75,451,178...75,508,142 JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in ISO
ISS
(PMID:28575648)
GO_REF:0000024
RGD
UniProt
PMID:28575648 GO_REF:0000024 NCBI chr 1:96,200,155...96,261,295
Ensembl chr 1:96,200,156...96,261,295
JBrowse link
G Tnfsf4 TNF superfamily member 4 acts_upstream_of_or_within ISO (MGI:57200|PMID:3473481) RGD PMID:3473481 MGI:57200 NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6407480|PMID:31391339)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31391339 GO_REF:0000024 GO_REF:0000107 MGI:6407480 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO
PMID:19342457
GO_REF:0000107
(PMID:19342457)
Ensembl
RGD
PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP PMID:19342457 UniProt PMID:19342457 RGD:4891166 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 NOT|involved_in ISO (PMID:9703385)
(PMID:19342457)
RGD PMID:9703385 PMID:19342457 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
cortisol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 involved_in ISO
IEA
(PMID:8538347)
GO_REF:0000107
RGD
Ensembl
PMID:8538347 GO_REF:0000107 NCBI chr19:33,397,656...33,402,899
Ensembl chr19:33,397,656...33,402,899
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:1380156)
Ensembl
RGD
PMID:1380156 GO_REF:0000107 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5315361|PMID:12925531)
(MGI:52337|PMID:1419907)
(PMID:1380156), (PMID:7592599), (PMID:7947975)
UniProt
RGD
PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 More... GO_REF:0000024 MGI:52337 MGI:5315361, RGD:13792537 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2182095|MGI:5758867 (MGI:6093414|PMID:28973536) RGD PMID:28973536 MGI:6093414 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:18723875 RGD:2311353 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
cytosolic lipolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO MGI:2386686|MGI:5629937 (MGI:5752114|PMID:24622797) RGD PMID:24622797 MGI:5752114 NCBI chr 1:205,731,814...205,743,430
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Ces1d carboxylesterase 1D acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:6501556 (MGI:6306193|PMID:30862682)
GO_REF:0000107
RGD
Ensembl
PMID:30862682 GO_REF:0000107 MGI:6306193 NCBI chr19:13,873,490...13,912,035 JBrowse link
diacylglycerol biosynthetic process term browser