Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:cotranslational protein targeting to membrane
go back to main search page
Accession:GO:0006613 term browser browse the term
Definition:The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.
Synonyms:exact_synonym: cotranslational membrane targeting;   cotranslational protein membrane targeting


show annotations for term's descendants           Sort by:
cotranslational protein targeting to membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ARL6 interacting reticulophagy regulator 1 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:10508919) 		GO_Central
Ensembl
RGD		 PMID:10508919 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:172,430,475...172,439,990
Ensembl chr 1:172,430,489...172,439,994 		JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:28782633), (PMID:8616892) 		UniProt
Ensembl
RGD		 PMID:8616892 PMID:28782633 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:122,530,785...122,545,141
Ensembl chr 4:120,960,626...120,987,925 		JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:77,316,901...77,354,978
Ensembl chr17:72,407,671...72,434,494 		JBrowse link
G Tram1 translocation associated membrane protein 1 involved_in ISO
IEA
ISS 		(PMID:8616892), (PMID:9506517)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:8616892 PMID:9506517 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:5,642,579...5,667,666
Ensembl chr 5:5,642,546...5,686,971 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000062486 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr18:25,931,666...25,951,758 JBrowse link
G ENSRNOG00000065388 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr14:18,768,039...18,769,105 JBrowse link
G LOC120099767 signal recognition particle subunit SRP72-like involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000104
GO_REF:0000002 		GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:85,110,218...85,112,422 JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 acts_upstream_of_or_within ISO
IEA 		(PMID:22375059)
GO_REF:0000107 		RGD
Ensembl		 PMID:22375059 GO_REF:0000107 NCBI chr 4:122,530,785...122,545,141
Ensembl chr 4:120,960,626...120,987,925 		JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:77,316,901...77,354,978
Ensembl chr17:72,407,671...72,434,494 		JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:22375059)
GO_REF:0000107
MGI:5442171 (PMID:22375059)
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:22375059 GO_REF:0000033 GO_REF:0000107 NCBI chr20:46,245,101...46,314,055
Ensembl chr20:46,245,101...46,314,055 		JBrowse link
G Srp14 signal recognition particle 14 involved_in IEA GO_REF:0000104
GO_REF:0000002 		UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:105,442,184...105,445,875
Ensembl chr 3:105,442,198...105,445,859 		JBrowse link
G Srp14l1 signal recognition particle 14 like 1 involved_in IEA GO_REF:0000104
GO_REF:0000002 		UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 9:86,645,829...86,649,077
Ensembl chr 9:86,647,223...86,647,627 		JBrowse link
G Srp19 signal recognition particle 19 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:26,205,888...26,212,171
Ensembl chr18:25,931,589...25,938,017 		JBrowse link
G Srp54a signal recognition particle 54A involved_in IEA GO_REF:0000104
GO_REF:0000002 		UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 6:78,322,308...78,362,017
Ensembl chr 6:72,587,605...72,625,189 		JBrowse link
G Srp68 signal recognition particle 68 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:101,980,089...102,006,913
Ensembl chr10:101,481,212...101,508,035 		JBrowse link
G Srp72 signal recognition particle 72 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000104
GO_REF:0000002 		GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr14:31,522,424...31,549,978
Ensembl chr14:31,168,293...31,195,729 		JBrowse link
G Srp9 signal recognition particle 9 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:93,832,580...93,840,720
Ensembl chr13:93,832,580...93,840,720 		JBrowse link
G Srpra SRP receptor subunit alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:41,818,199...41,824,292
Ensembl chr 8:33,560,348...33,566,470 		JBrowse link
G Ssr3 signal sequence receptor subunit 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:149,605,005...149,625,069
Ensembl chr 2:149,605,005...149,625,132 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000065388 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr14:18,768,039...18,769,105 JBrowse link
G Srp19 signal recognition particle 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:26,205,888...26,212,171
Ensembl chr18:25,931,589...25,938,017 		JBrowse link
G Srp54a signal recognition particle 54A involved_in ISO (PMID:16469117) RGD PMID:16469117 NCBI chr 6:78,322,308...78,362,017
Ensembl chr 6:72,587,605...72,625,189 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:122,530,785...122,545,141
Ensembl chr 4:120,960,626...120,987,925 		JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:77,316,901...77,354,978
Ensembl chr17:72,407,671...72,434,494 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:66,569,184...66,577,394
Ensembl chr 5:61,773,594...61,781,804 		JBrowse link
G Srp54a signal recognition particle 54A involved_in ISO
IBA 		(PMID:8521805)
GO_REF:0000033 		RGD
GO_Central		 PMID:8521805 GO_REF:0000033 NCBI chr 6:78,322,308...78,362,017
Ensembl chr 6:72,587,605...72,625,189 		JBrowse link
G Tram1 translocation associated membrane protein 1 involved_in IEA
ISO 		GO_REF:0000002
(PMID:8698819) 		InterPro
RGD		 PMID:8698819 GO_REF:0000002 NCBI chr 5:5,642,579...5,667,666
Ensembl chr 5:5,642,546...5,686,971 		JBrowse link
G Tram2 translocation associated membrane protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:23,419,204...23,498,745
Ensembl chr 9:23,424,232...23,498,689 		JBrowse link
G Zfand2b zinc finger AN1-type containing 2B acts_upstream_of_or_within ISO
IEA 		(PMID:24160817)
GO_REF:0000107 		RGD
Ensembl		 PMID:24160817 GO_REF:0000107 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    localization 5730
      establishment of localization 5080
        establishment of protein localization 1808
          establishment of protein localization to membrane 287
            protein targeting to membrane 127
              cotranslational protein targeting to membrane 20
                SRP-dependent cotranslational protein targeting to membrane + 19
Path 2
Term Annotations click to browse term
  biological_process 20543
    localization 5730
      macromolecule localization 3194
        cellular macromolecule localization 2728
          protein localization 2716
            establishment of protein localization 1808
              protein targeting 301
                protein targeting to membrane 127
                  cotranslational protein targeting to membrane 20
                    SRP-dependent cotranslational protein targeting to membrane + 19
paths to the root