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ONTOLOGY REPORT - ANNOTATIONS


Term:polyamine biosynthetic process
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Accession:GO:0006596 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.
Synonyms:exact_synonym: polyamine anabolism;   polyamine biosynthesis;   polyamine formation;   polyamine synthesis
 xref: MetaCyc:POLYAMSYN-PWY


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polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyltransferase 1 involved_in ISO (PMID:15283699) UniProt PMID:15283699 NCBI chrNW_004955509:4,198,876...4,202,103
Ensembl chrNW_004955509:4,198,651...4,202,483
JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 NOT|involved_in ISO (PMID:15283699) UniProt PMID:15283699 NCBI chrNW_004955467:9,306,210...9,308,668
Ensembl chrNW_004955467:9,305,746...9,308,668
JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO (PMID:16354669) UniProt PMID:16354669 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 ISO RGD PMID:1415709 PMID:10430362 RGD:1578320 RGD:7242912 NCBI chrNW_004955487:5,603,722...5,608,386
Ensembl chrNW_004955487:5,603,722...5,608,386
JBrowse link
G Paox polyamine oxidase involved_in ISO (PMID:16354669) UniProt PMID:16354669 NCBI chrNW_004955477:11,028,488...11,038,556 JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 involved_in ISO (MGI:5574513|PMID:24967154) UniProt PMID:24967154 MGI:5574513 NCBI chrNW_004955487:5,603,722...5,608,386
Ensembl chrNW_004955487:5,603,722...5,608,386
JBrowse link
regulation of polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nnmt nicotinamide N-methyltransferase involved_in ISO (MGI:5565106|PMID:24717514) UniProt PMID:24717514 MGI:5565106 NCBI chrNW_004955412:15,892,906...15,916,166 JBrowse link
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 acts_upstream_of_or_within ISO (MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709 PMID:10430362 PMID:10712236 PMID:11856372 MGI:3584197 RGD:1578320 RGD:7242911 RGD:7242912 NCBI chrNW_004955411:35,541,517...35,563,209
Ensembl chrNW_004955411:35,541,517...35,563,209
JBrowse link
G Srm spermidine synthase involved_in ISO (PMID:17585781) RGD
UniProt
PMID:8494549 PMID:12843627 PMID:16931179 PMID:17585781 RGD:1359042 RGD:7242920 RGD:7242928 NCBI chrNW_004955486:2,631,579...2,634,779
Ensembl chrNW_004955486:2,631,586...2,634,527
JBrowse link
spermine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 acts_upstream_of_or_within ISO (MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709 PMID:10430362 PMID:10712236 PMID:11856372 MGI:3584197 RGD:1578320 RGD:7242911 RGD:7242912 NCBI chrNW_004955411:35,541,517...35,563,209
Ensembl chrNW_004955411:35,541,517...35,563,209
JBrowse link
G Sms spermine synthase ISO RGD PMID:8494549 RGD:7242928 NCBI chrNW_004955509:2,277,501...2,328,612
Ensembl chrNW_004955509:2,276,878...2,329,620
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11978
    metabolic process 7562
      nitrogen compound metabolic process 6331
        organonitrogen compound metabolic process 4340
          amine metabolic process 100
            amine biosynthetic process 32
              cellular biogenic amine biosynthetic process 32
                polyamine biosynthetic process 8
                  nor-spermidine biosynthetic process 0
                  putrescine biosynthetic process + 2
                  regulation of polyamine biosynthetic process + 2
                  spermidine biosynthetic process + 3
                  spermine biosynthetic process 2
                  thermospermine biosynthetic process 0
                  trimethylenediamine biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 11978
    metabolic process 7562
      nitrogen compound metabolic process 6331
        organonitrogen compound metabolic process 4340
          amine metabolic process 100
            cellular amine metabolic process 98
              cellular biogenic amine metabolic process 85
                polyamine metabolic process 13
                  polyamine biosynthetic process 8
                    nor-spermidine biosynthetic process 0
                    putrescine biosynthetic process + 2
                    regulation of polyamine biosynthetic process + 2
                    spermidine biosynthetic process + 3
                    spermine biosynthetic process 2
                    thermospermine biosynthetic process 0
                    trimethylenediamine biosynthetic process 0
paths to the root