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ONTOLOGY REPORT - ANNOTATIONS


Term:ornithine metabolic process
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Accession:GO:0006591 term browser browse the term
Definition:The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.
Synonyms:exact_synonym: ornithine metabolism


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ornithine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin2 antizyme inhibitor 2 ISO (MGI:MGI:3695330|PMID:16916800) MGI PMID:16916800 MGI:MGI:3695330 NCBI chrNW_004936474:15,941,655...15,973,481 JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO (PMID:17827783) BHF-UCL PMID:17827783 NCBI chrNW_004936530:2,401,053...2,425,989 JBrowse link
G Otc ornithine carbamoyltransferase ISO RGD PMID:4062872 RGD:2300098 NCBI chrNW_004936502:5,234,253...5,291,891 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 ISO RGD PMID:15753084 RGD:8693655 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101975532 delta-1-pyrroline-5-carboxylate synthase ISO (PMID:11092761), (PMID:26297558) UniProtKB PMID:11092761, PMID:26297558 NCBI chrNW_004936636:3,779,259...3,800,846 JBrowse link
ornithine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine carbamoyltransferase ISO (PMID:2556444), (PMID:8112735) BHF-UCL PMID:2556444, PMID:8112735 NCBI chrNW_004936502:5,234,253...5,291,891 JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 ISO (MGI:MGI:5574513|PMID:24967154) UniProtKB PMID:24967154 MGI:MGI:5574513 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11998
    metabolic process 7668
      primary metabolic process 6798
        cellular amino acid metabolic process 186
          alpha-amino acid metabolic process 139
            ornithine metabolic process 6
              D-ornithine metabolic process 0
              L-alanine biosynthetic process via ornithine 0
              arginine biosynthetic process via ornithine + 0
              arginine catabolic process to ornithine 1
              glutamate catabolic process to ornithine 0
              ornithine biosynthetic process 1
              ornithine catabolic process + 1
              putrescine biosynthetic process from ornithine 1
              regulation of ornithine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 11998
    metabolic process 7668
      cellular metabolic process 7073
        organic acid metabolic process 702
          oxoacid metabolic process 687
            carboxylic acid metabolic process 655
              cellular amino acid metabolic process 186
                alpha-amino acid metabolic process 139
                  ornithine metabolic process 6
                    D-ornithine metabolic process 0
                    L-alanine biosynthetic process via ornithine 0
                    arginine biosynthetic process via ornithine + 0
                    arginine catabolic process to ornithine 1
                    glutamate catabolic process to ornithine 0
                    ornithine biosynthetic process 1
                    ornithine catabolic process + 1
                    putrescine biosynthetic process from ornithine 1
                    regulation of ornithine metabolic process + 0
paths to the root

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