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ONTOLOGY REPORT - ANNOTATIONS


Term:valine metabolic process
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Accession:GO:0006573 term browser browse the term
Definition:The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.
Synonyms:exact_synonym: valine metabolism



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valine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 involved_in IDA PMID:2768248 UniProt PMID:2768248 RGD:1599052 NCBI chr 6:104,077,975...104,098,636
Ensembl chr 6:104,077,979...104,098,656
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3028726|MGI:3772355 (MGI:3027291|PMID:14755340), (MGI:3770498|PMID:17767905)
Ensembl
RGD
PMID:14755340 PMID:17767905 GO_REF:0000107 MGI:3027291 MGI:3770498 NCBI chr 1:96,040,407...96,060,008
Ensembl chr 1:96,042,625...96,060,007
JBrowse link
valine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,040,407...96,060,008
Ensembl chr 1:96,042,625...96,060,007
JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924
JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 involved_in IDA
IEA
ISO
IBA
GO_REF:0000107
(PMID:23835272)
PMID:21873635
Ensembl
RGD
PMID:23835272 PMID:2768248 PMID:21873635 GO_REF:0000107, RGD:1599052, RGD:13792537 NCBI chr 6:104,077,975...104,098,636
Ensembl chr 6:104,077,979...104,098,656
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IBA
ISS
ISO
IEA
PMID:21873635
GO_REF:0000024
(PMID:16466957)
GO_REF:0000041
UniProt
RGD
PMID:16466957 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr 4:81,649,180...81,747,244
Ensembl chr 4:81,649,175...81,780,617
JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 9:48,590,097...48,669,896
Ensembl chr 9:48,590,099...48,669,824
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19541
    metabolic process 11844
      primary metabolic process 10558
        cellular amino acid metabolic process 277
          alpha-amino acid metabolic process 199
            valine metabolic process 7
              D-valine metabolic process + 0
              valine biosynthetic process 3
              valine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19541
    metabolic process 11844
      small molecule metabolic process 1806
        organic acid metabolic process 1016
          oxoacid metabolic process 984
            carboxylic acid metabolic process 963
              cellular amino acid metabolic process 277
                alpha-amino acid metabolic process 199
                  valine metabolic process 7
                    D-valine metabolic process + 0
                    valine biosynthetic process 3
                    valine catabolic process + 4
paths to the root