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ONTOLOGY REPORT - ANNOTATIONS


Term:tryptophan catabolic process
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Accession:GO:0006569 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
Synonyms:exact_synonym: tryptophan breakdown;   tryptophan catabolism;   tryptophan degradation
 narrow_synonym: tryptophan catabolic process, using tryptophanase;   tryptophan catabolism, using tryptophanase


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tryptophan catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr2B:24,958,661...25,019,901
Ensembl chr2B:138,918,281...138,978,407
JBrowse link
G KYNU kynureninase ISO (PMID:17334708) UniProtKB PMID:17334708 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chr17:72,265,365...72,285,764
Ensembl chr17:77,816,908...77,835,905
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 ISO (PMID:17671174)
(MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)
UniProtKB
MGI
PMID:17499941 PMID:17671174 MGI:3712725 MGI:3719924 NCBI chr 8:39,149,045...39,209,671
Ensembl chr 8:36,665,240...36,717,420
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO (PMID:27762317) UniProtKB PMID:27762317 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12593
    metabolic process 7898
      primary metabolic process 6952
        cellular amino acid metabolic process 183
          cellular amino acid catabolic process 52
            tryptophan catabolic process 6
              tryptophan catabolic process to acetyl-CoA 2
              tryptophan catabolic process to catechol 0
              tryptophan catabolic process to indole-3-acetate 0
              tryptophan catabolic process to kynurenine 4
Path 2
Term Annotations click to browse term
  biological_process 12593
    metabolic process 7898
      nitrogen compound metabolic process 6574
        organonitrogen compound metabolic process 4493
          amine metabolic process 101
            cellular amine metabolic process 98
              cellular biogenic amine metabolic process 85
                indolalkylamine metabolic process 7
                  tryptophan metabolic process 7
                    tryptophan catabolic process 6
                      tryptophan catabolic process to acetyl-CoA 2
                      tryptophan catabolic process to catechol 0
                      tryptophan catabolic process to indole-3-acetate 0
                      tryptophan catabolic process to kynurenine 4
paths to the root