Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:threonine catabolic process
go back to main search page
Accession:GO:0006567 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.
Synonyms:exact_synonym: threonine breakdown;   threonine catabolism;   threonine degradation
 xref: MetaCyc:THREOCAT-PWY;   UM-BBD_pathwayID:met


show annotations for term's descendants           Sort by:
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr10:26,821,121...26,827,496
Ensembl chr10:26,821,027...26,827,707 		JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,725,123...10,728,087 JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,731,972...10,759,768
Ensembl chr26:10,743,947...10,759,777 		JBrowse link
G TDH L-threonine dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21896756) Ensembl
TreeGrafter
MGI		 PMID:21896756 GO_REF:0000107 GO_REF:0000118 NCBI chr25:26,541,717...26,560,366 JBrowse link
G THA1 threonine aldolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:2,909,869...2,917,921 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      primary metabolic process 9574
        amino acid metabolic process 301
          proteinogenic amino acid metabolic process 175
            aspartate family amino acid metabolic process 42
              threonine metabolic process 7
                threonine catabolic process 5
                  L-threonine catabolic process to D-lactate 0
                  L-threonine catabolic process to acetyl-CoA 0
                  L-threonine catabolic process to glycine 0
                  L-threonine catabolic process to propionate 0
Path 2
Term Annotations click to browse term
  biological_process 17917
    cellular process 16926
      cellular metabolic process 9218
        organic acid metabolic process 983
          oxoacid metabolic process 972
            carboxylic acid metabolic process 953
              alpha-amino acid metabolic process 220
                L-amino acid metabolic process 185
                  aspartate family amino acid metabolic process 42
                    threonine metabolic process 7
                      threonine catabolic process 5
                        L-threonine catabolic process to D-lactate 0
                        L-threonine catabolic process to acetyl-CoA 0
                        L-threonine catabolic process to glycine 0
                        L-threonine catabolic process to propionate 0
paths to the root