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ONTOLOGY REPORT - ANNOTATIONS


Term:L-serine catabolic process
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Accession:GO:0006565 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
Synonyms:exact_synonym: L-serine breakdown;   L-serine catabolism;   L-serine degradation
 xref: MetaCyc:SERDEG-PWY


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L-serine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase ISO (PMID:18776696) RGD PMID:18776696 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Sds serine dehydratase IEA
ISO
GO_REF:0000107
(PMID:15689518), (PMID:18342636)
Ensembl
RGD
PMID:15689518 PMID:18342636 GO_REF:0000107 NCBI chr12:41,620,429...41,627,741
Ensembl chr12:41,620,393...41,627,741
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO
IBA
(PMID:17482557)
PMID:21873635
RGD PMID:17482557, PMID:21873635 RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      primary metabolic process 10847
        cellular amino acid metabolic process 269
          cellular amino acid catabolic process 94
            L-serine catabolic process 4
Path 2
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      cellular metabolic process 11040
        organic acid metabolic process 1013
          oxoacid metabolic process 975
            carboxylic acid metabolic process 956
              cellular amino acid metabolic process 269
                alpha-amino acid metabolic process 191
                  serine family amino acid metabolic process 41
                    serine family amino acid catabolic process 16
                      L-serine catabolic process 4
paths to the root