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ONTOLOGY REPORT - ANNOTATIONS


Term:L-phenylalanine metabolic process
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Accession:GO:0006558 term browser browse the term
Definition:The chemical reactions and pathways involving L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid.
Synonyms:exact_synonym: L-phenylalanine metabolism
 broad_synonym: phenylalanine metabolic process;   phenylalanine metabolism


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L-phenylalanine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase IDA RGD PMID:16953590 RGD:1601531 NCBI chr 7:28,066,639...28,129,772
Ensembl chr 7:28,066,635...28,129,769
JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 IDA PMID:1465414 CAFA PMID:1465414 RGD:12792994 NCBI chr20:30,689,690...30,696,465
Ensembl chr20:30,690,810...30,696,476
JBrowse link
G Spr sepiapterin reductase ISO MGI:3757641 (MGI:3722569|PMID:16532389) RGD PMID:16532389 MGI:3722569 NCBI chr 4:116,912,343...116,916,073
Ensembl chr 4:116,912,351...116,916,236
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
G Gstz1 glutathione S-transferase zeta 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:111,176,798...111,187,246
Ensembl chr 6:111,176,798...111,187,244
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr11:65,983,221...66,034,555
Ensembl chr11:65,983,221...66,034,573
JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:38,828,606...38,839,956
Ensembl chr12:38,828,444...38,839,969
JBrowse link
G Pah phenylalanine hydroxylase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,066,639...28,129,772
Ensembl chr 7:28,066,635...28,129,769
JBrowse link
G Qdpr quinoid dihydropteridine reductase IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:4155291, PMID:21873635 RGD:5128604, RGD:13792537 NCBI chr14:70,164,682...70,178,284
Ensembl chr14:70,164,650...70,178,284
JBrowse link
G Tat tyrosine aminotransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase IDA RGD PMID:10839989 RGD:1601535 NCBI chr 7:28,066,639...28,129,772
Ensembl chr 7:28,066,635...28,129,769
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      cellular metabolic process 10964
        organic acid metabolic process 1007
          aromatic amino acid family metabolic process 28
            L-phenylalanine metabolic process 9
              L-phenylalanine biosynthetic process + 0
              L-phenylalanine catabolic process + 7
              tyrosine biosynthetic process, by oxidation of phenylalanine 1
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      organic substance metabolic process 11552
        organic acid metabolic process 1007
          oxoacid metabolic process 969
            carboxylic acid metabolic process 950
              cellular amino acid metabolic process 268
                alpha-amino acid metabolic process 190
                  erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 9
                    L-phenylalanine metabolic process 9
                      L-phenylalanine biosynthetic process + 0
                      L-phenylalanine catabolic process + 7
                      tyrosine biosynthetic process, by oxidation of phenylalanine 1
paths to the root