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ONTOLOGY REPORT - ANNOTATIONS


Term:lysine catabolic process
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Accession:GO:0006554 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.
Synonyms:exact_synonym: lysine breakdown;   lysine catabolism;   lysine degradation



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L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (MGI:1350812|PMID:10567240) MGI PMID:10567240 MGI:1350812 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515508 peroxisomal sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,306,327...45,319,938
Ensembl chr12:45,257,188...45,322,767
JBrowse link
G LOC110255229 peroxisomal sarcosine oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:45,256,806...45,270,755
Ensembl chr12:45,257,188...45,322,767
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,123...98,111,572
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16673
    metabolic process 10521
      primary metabolic process 9354
        cellular amino acid metabolic process 271
          cellular amino acid catabolic process 95
            lysine catabolic process 4
              D-lysine catabolic process 0
              L-lysine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 16673
    metabolic process 10521
      cellular metabolic process 9547
        organic acid metabolic process 888
          oxoacid metabolic process 861
            carboxylic acid metabolic process 844
              cellular amino acid metabolic process 271
                alpha-amino acid metabolic process 192
                  aspartate family amino acid metabolic process 42
                    aspartate family amino acid catabolic process 14
                      lysine catabolic process 4
                        D-lysine catabolic process 0
                        L-lysine catabolic process + 4
paths to the root