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ONTOLOGY REPORT - ANNOTATIONS

Term:lysine catabolic process
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Accession:GO:0006554 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.
Synonyms:exact_synonym: lysine breakdown;   lysine catabolism;   lysine degradation


show annotations for term's descendants           Sort by:
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IMP (PMID:10775527) UniProt PMID:10775527 NCBI chr 7:122,073,549...122,144,249
Ensembl chr 7:122,064,583...122,144,308 		JBrowse link
G CRYM crystallin mu involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr16:21,258,521...21,303,062
Ensembl chr16:21,238,874...21,303,083 		JBrowse link
G HYKK hydroxylysine kinase involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr15:78,507,577...78,537,373
Ensembl chr15:78,507,564...78,537,372 		JBrowse link
G PIPOX pipecolic acid and sarcosine oxidase involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr17:29,043,141...29,057,216
Ensembl chr17:28,950,513...29,057,216 		JBrowse link
G SLC25A21 solute carrier family 25 member 21 involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr14:36,677,921...37,172,606
Ensembl chr14:36,677,921...37,172,606 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567240) Ensembl
MGI		 PMID:10567240 GO_REF:0000107 NCBI chr 7:122,073,549...122,144,249
Ensembl chr 7:122,064,583...122,144,308 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IDA
IBA
IEA		 (PMID:10642506) UniProt
GO_Central
TreeGrafter		 PMID:10642506 GO_REF:0000033 GO_REF:0000118 NCBI chr17:29,043,141...29,057,216
Ensembl chr17:28,950,513...29,057,216 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:170,060,222...170,094,292
Ensembl chr 4:170,060,222...170,091,699 		JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:122,073,549...122,144,249
Ensembl chr 7:122,064,583...122,144,308 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:74,881,916...74,903,743
Ensembl chr14:74,881,891...74,903,743 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      organic substance metabolic process 12005
        organonitrogen compound metabolic process 5614
          organonitrogen compound catabolic process 1570
            alpha-amino acid catabolic process 102
              lysine catabolic process 7
                D-lysine catabolic process 0
                L-lysine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      small molecule metabolic process 2024
        organic acid metabolic process 1059
          oxoacid metabolic process 1049
            carboxylic acid metabolic process 1022
              carboxylic acid catabolic process 275
                alpha-amino acid catabolic process 102
                  lysine catabolic process 7
                    D-lysine catabolic process 0
                    L-lysine catabolic process + 4
paths to the root