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ONTOLOGY REPORT - ANNOTATIONS


Term:lysine catabolic process
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Accession:GO:0006554 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.
Synonyms:exact_synonym: lysine breakdown;   lysine catabolism;   lysine degradation



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lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in NAS (PMID:10775527) UniProt PMID:10775527 NCBI chr 7:122,073,544...122,144,269
Ensembl chr 7:122,064,583...122,144,308
JBrowse link
G CRYM crystallin mu involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr16:21,258,521...21,303,062
Ensembl chr16:21,238,874...21,303,083
JBrowse link
G HYKK hydroxylysine kinase involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr15:78,507,577...78,537,373
Ensembl chr15:78,507,564...78,537,372
JBrowse link
G PIPOX pipecolic acid and sarcosine oxidase involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr17:29,043,141...29,057,227
Ensembl chr17:28,950,513...29,057,216
JBrowse link
G SLC25A21 solute carrier family 25 member 21 involved_in TAS Reactome Reactome:R-HSA-71064 NCBI chr14:36,677,318...37,172,606
Ensembl chr14:36,677,921...37,172,606
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (MGI:1350812|PMID:10567240) MGI PMID:10567240 MGI:1350812 NCBI chr 7:122,073,544...122,144,269
Ensembl chr 7:122,064,583...122,144,308
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IBA
IDA
(PMID:21873635)
(PMID:10642506)
GO_Central
UniProt
PMID:10642506 PMID:21873635 NCBI chr17:29,043,141...29,057,227
Ensembl chr17:28,950,513...29,057,216
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:170,060,222...170,091,699
Ensembl chr 4:170,060,222...170,091,699
JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:122,073,544...122,144,269
Ensembl chr 7:122,064,583...122,144,308
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:74,881,913...74,903,743
Ensembl chr14:74,881,891...74,903,743
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18605
    metabolic process 11952
      primary metabolic process 10618
        cellular amino acid metabolic process 325
          cellular amino acid catabolic process 118
            lysine catabolic process 7
              D-lysine catabolic process 0
              L-lysine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 18605
    metabolic process 11952
      cellular metabolic process 10867
        organic acid metabolic process 1062
          oxoacid metabolic process 1034
            carboxylic acid metabolic process 1007
              cellular amino acid metabolic process 325
                alpha-amino acid metabolic process 221
                  aspartate family amino acid metabolic process 51
                    aspartate family amino acid catabolic process 18
                      lysine catabolic process 7
                        D-lysine catabolic process 0
                        L-lysine catabolic process + 4
paths to the root