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ONTOLOGY REPORT - ANNOTATIONS


Term:lysine metabolic process
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Accession:GO:0006553 term browser browse the term
Definition:The chemical reactions and pathways involving lysine, 2,6-diaminohexanoic acid.
Synonyms:exact_synonym: lysine metabolism
 xref: Wikipedia:Lysine


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lysine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249 JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350812|PMID:10567240) MGI
Ensembl
PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chrNW_004936605:3,135,977...3,190,956 JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,218,097...5,252,579 JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936605:3,135,977...3,190,956 JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936488:4,038,985...4,061,071 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14954
    metabolic process 9452
      primary metabolic process 8463
        cellular amino acid metabolic process 247
          alpha-amino acid metabolic process 168
            aspartate family amino acid metabolic process 35
              lysine metabolic process 4
                D-lysine metabolic process + 0
                L-lysine metabolic process + 3
                lysine biosynthetic process + 0
                lysine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 14954
    metabolic process 9452
      cellular metabolic process 8560
        organic acid metabolic process 786
          oxoacid metabolic process 765
            carboxylic acid metabolic process 754
              cellular amino acid metabolic process 247
                alpha-amino acid metabolic process 168
                  aspartate family amino acid metabolic process 35
                    lysine metabolic process 4
                      D-lysine metabolic process + 0
                      L-lysine metabolic process + 3
                      lysine biosynthetic process + 0
                      lysine catabolic process + 3
paths to the root