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ONTOLOGY REPORT - ANNOTATIONS


Term:lysine metabolic process
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Accession:GO:0006553 term browser browse the term
Definition:The chemical reactions and pathways involving lysine, 2,6-diaminohexanoic acid.
Synonyms:exact_synonym: lysine metabolism
 xref: Wikipedia:Lysine



show annotations for term's descendants           Sort by:
 
lysine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,991...126,184,870
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350812|PMID:10567240) MGI
Ensembl
PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515508 peroxisomal sarcosine oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:45,306,327...45,319,938
Ensembl chr12:45,257,188...45,322,767
JBrowse link
G LOC110255229 peroxisomal sarcosine oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr12:45,256,806...45,270,755
Ensembl chr12:45,257,188...45,322,767
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,123...98,111,572
JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:35,903,902...35,948,573
Ensembl chr 9:35,904,029...35,948,575
JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16975
    metabolic process 10638
      primary metabolic process 9473
        cellular amino acid metabolic process 272
          alpha-amino acid metabolic process 193
            aspartate family amino acid metabolic process 43
              lysine metabolic process 6
                D-lysine metabolic process + 0
                L-lysine metabolic process + 4
                lysine biosynthetic process + 2
                lysine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 16975
    metabolic process 10638
      cellular metabolic process 9654
        organic acid metabolic process 899
          oxoacid metabolic process 872
            carboxylic acid metabolic process 855
              cellular amino acid metabolic process 272
                alpha-amino acid metabolic process 193
                  aspartate family amino acid metabolic process 43
                    lysine metabolic process 6
                      D-lysine metabolic process + 0
                      L-lysine metabolic process + 4
                      lysine biosynthetic process + 2
                      lysine catabolic process + 4
paths to the root