Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:lysine metabolic process
go back to main search page
Accession:GO:0006553 term browser browse the term
Definition:The chemical reactions and pathways involving lysine, 2,6-diaminohexanoic acid.
Synonyms:exact_synonym: lysine metabolism
 xref: Wikipedia:Lysine



show annotations for term's descendants           Sort by:
 
lysine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350812|PMID:10567240) MGI
Ensembl
PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,717,083...27,820,776
Ensembl chr17:28,225,831...28,240,210
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15229
    metabolic process 9937
      primary metabolic process 8863
        cellular amino acid metabolic process 268
          alpha-amino acid metabolic process 172
            aspartate family amino acid metabolic process 35
              lysine metabolic process 4
                D-lysine metabolic process + 0
                L-lysine metabolic process + 3
                lysine biosynthetic process + 0
                lysine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 15229
    metabolic process 9937
      cellular metabolic process 8986
        organic acid metabolic process 847
          oxoacid metabolic process 822
            carboxylic acid metabolic process 806
              cellular amino acid metabolic process 268
                alpha-amino acid metabolic process 172
                  aspartate family amino acid metabolic process 35
                    lysine metabolic process 4
                      D-lysine metabolic process + 0
                      L-lysine metabolic process + 3
                      lysine biosynthetic process + 0
                      lysine catabolic process + 3
paths to the root