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ONTOLOGY REPORT - ANNOTATIONS


Term:histidine catabolic process
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Accession:GO:0006548 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
Synonyms:exact_synonym: histidine breakdown;   histidine catabolism;   histidine degradation



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histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156
JBrowse link
G Hal histidine ammonia lyase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:52899|PMID:8486363)
RGD PMID:8486363 PMID:21873635 MGI:52899, RGD:13792537 NCBI chr 7:28,007,449...28,037,701
Ensembl chr 7:28,006,972...28,037,701
JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:2138019|PMID:11478947)
(PMID:22767596)
GO_REF:0000107
RGD
Ensembl
PMID:11478947 PMID:22767596 PMID:21873635 GO_REF:0000107 MGI:2138019, RGD:13792537 NCBI chr 3:113,847,256...113,865,334
Ensembl chr 3:113,847,260...113,865,341
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in ISO
IBA
(PMID:19304569)
PMID:21873635
RGD PMID:19304569 PMID:21873635 RGD:13792537 NCBI chr 4:122,844,933...122,876,584
Ensembl chr 4:122,844,926...122,876,591
JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735
JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,007,449...28,037,701
Ensembl chr 7:28,006,972...28,037,701
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,844,933...122,876,584
Ensembl chr 4:122,844,926...122,876,591
JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735
JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,007,449...28,037,701
Ensembl chr 7:28,006,972...28,037,701
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,844,933...122,876,584
Ensembl chr 4:122,844,926...122,876,591
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    metabolic process 11736
      primary metabolic process 10467
        cellular amino acid metabolic process 272
          histidine metabolic process 8
            histidine catabolic process 5
              N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine 0
              histidine catabolic process to 2-oxoglutarate 0
              histidine catabolic process to glutamate and formamide 4
              histidine catabolic process to glutamate and formate 4
              histidine catabolic process to hydantoin-5-propionate 0
              histidine catabolic process to imidazol-5-yl-lactate 0
Path 2
Term Annotations click to browse term
  biological_process 19390
    metabolic process 11736
      cellular metabolic process 10656
        organic acid metabolic process 1008
          oxoacid metabolic process 976
            carboxylic acid metabolic process 957
              cellular amino acid metabolic process 272
                histidine metabolic process 8
                  histidine catabolic process 5
                    N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine 0
                    histidine catabolic process to 2-oxoglutarate 0
                    histidine catabolic process to glutamate and formamide 4
                    histidine catabolic process to glutamate and formate 4
                    histidine catabolic process to hydantoin-5-propionate 0
                    histidine catabolic process to imidazol-5-yl-lactate 0
paths to the root