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ONTOLOGY REPORT - ANNOTATIONS

Term:glutamine metabolic process
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Accession:GO:0006541 term browser browse the term
Definition:The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
Synonyms:exact_synonym: glutamine metabolism


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glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:12522136 RGD:5135508 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:28701731) MGI PMID:28701731 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IBA
IEA 		RGD
GO_Central
InterPro		 PMID:2474281 PMID:2803258 GO_REF:0000002 GO_REF:0000033 RGD:10755425 RGD:5132588 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA
IBA 		InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697 		JBrowse link
G GLS glutaminase involved_in IEA InterPro GO_REF:0000002 NCBI chr37:1,433,640...1,508,347
Ensembl chr37:1,433,398...1,508,146 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:722,105...737,857
Ensembl chr10:722,202...737,753 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:23663782) UniProt PMID:23663782 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G NIT2 nitrilase family member 2 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr33:6,944,340...6,960,540
Ensembl chr33:6,944,374...6,959,074 		JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase ISO RGD PMID:3436958 RGD:1599004 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,228,831...16,244,104
Ensembl chr26:16,234,710...16,240,012 		JBrowse link
G TRIM54 tripartite motif containing 54 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:21,257,660...21,278,410
Ensembl chr17:21,257,706...21,278,274 		JBrowse link
G UCP2 uncoupling protein 2 involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr21:24,304,410...24,311,392
Ensembl chr21:24,304,457...24,311,128 		JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase acts_upstream_of_or_within ISO (PMID:12559843) MGI PMID:12559843 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241 		JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase involved_in ISO
IBA
IEA 		RGD
GO_Central
InterPro		 PMID:28323 PMID:4403443 GO_REF:0000002 GO_REF:0000033 RGD:2301547 RGD:2301548 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241 		JBrowse link
G LGSN lengsin, lens protein with glutamine synthetase domain involved_in
NOT|involved_in 		IEA
IBA 		InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr12:26,852,832...26,884,307
Ensembl chr12:26,852,851...26,919,138 		JBrowse link
G LOC612295 glutamine synthetase-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:32,579,014...32,580,179 JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in
acts_upstream_of_or_within 		IEA
IBA
ISO 		(PMID:16641247) Ensembl
GO_Central
MGI		 PMID:16641247 GO_REF:0000033 GO_REF:0000107 NCBI chr37:1,433,640...1,508,347
Ensembl chr37:1,433,398...1,508,146 		JBrowse link
G GLS2 glutaminase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:722,105...737,857
Ensembl chr10:722,202...737,753 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22130
    cellular process 21661
      metabolic process 15378
        primary metabolic process 13957
          amino acid metabolic process 303
            proteinogenic amino acid metabolic process 179
              glutamine family amino acid metabolic process 75
                glutamine metabolic process 21
                  D-glutamine metabolic process 0
                  ammonia assimilation cycle + 3
                  cyclization of glutamine involved in intein-mediated protein splicing 0
                  glutamine biosynthetic process + 3
                  glutamine catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 22130
    cellular process 21661
      metabolic process 15378
        small molecule metabolic process 1830
          organic acid metabolic process 983
            oxoacid metabolic process 970
              carboxylic acid metabolic process 955
                alpha-amino acid metabolic process 221
                  L-amino acid metabolic process 187
                    glutamine family amino acid metabolic process 75
                      glutamine metabolic process 21
                        D-glutamine metabolic process 0
                        ammonia assimilation cycle + 3
                        cyclization of glutamine involved in intein-mediated protein splicing 0
                        glutamine biosynthetic process + 3
                        glutamine catabolic process 3
paths to the root