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ONTOLOGY REPORT - ANNOTATIONS

Term:glutamine metabolic process
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Accession:GO:0006541 term browser browse the term
Definition:The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
Synonyms:exact_synonym: glutamine metabolism


show annotations for term's descendants           Sort by:
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 IEP RGD PMID:12522136 RGD:5135508 NCBI chr 6:137,500,549...137,523,087
Ensembl chr 6:131,679,701...131,701,998 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO MGI:1856982 (PMID:28701731) RGD PMID:28701731 NCBI chr 3:130,269,979...130,280,109
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEP
IBA
IDA		 GO_REF:0000033 GO_Central
RGD		 PMID:2474281 PMID:2803258 GO_REF:0000033, RGD:5132588, RGD:10755425 NCBI chr 6:31,012,091...31,035,098
Ensembl chr 6:25,292,133...25,319,861 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,063,863...76,186,739
Ensembl chr 9:68,614,153...68,737,033 		JBrowse link
G Ctps1 CTP synthase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:139,372,349...139,440,441
Ensembl chr 5:134,125,025...134,154,180 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:35,277,658...35,418,505
Ensembl chr  X:31,645,873...31,786,733 		JBrowse link
G Gls glutaminase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:56,836,584...56,908,861
Ensembl chr 9:49,344,781...49,416,900 		JBrowse link
G Gls2 glutaminase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:1,201,757...1,218,014
Ensembl chr 7:617,288...633,426 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23663782)		 UniProt
RGD		 PMID:23663782 GO_REF:0000024 NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
G Gmps guanine monophosphate synthase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:150,587,824...150,641,564
Ensembl chr 2:148,435,643...148,485,875 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2137311 (PMID:17237885) RGD PMID:17237885 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
IEA		 (PMID:22674578)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:22674578 GO_REF:0000033 GO_REF:0000107 NCBI chr11:56,832,957...56,844,142
Ensembl chr11:43,363,985...43,375,024 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase IDA RGD PMID:3436958 RGD:1599004 NCBI chr10:54,189,157...54,210,685
Ensembl chr10:53,691,626...53,708,420 		JBrowse link
G Phgdh phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO MGI:3769591 (PMID:19114063) RGD PMID:19114063 NCBI chr 2:188,595,700...188,624,789
Ensembl chr 2:185,906,966...185,935,944 		JBrowse link
G Sirt4 sirtuin 4 involved_in ISO (PMID:23562301), (PMID:23663782) RGD PMID:23562301 PMID:23663782 NCBI chr12:46,785,852...46,800,179
Ensembl chr12:41,131,262...41,139,439 		JBrowse link
G Slc38a1 solute carrier family 38, member 1 involved_in IDA PMID:10660562 UniProt PMID:10660562 RGD:68922 NCBI chr 7:129,612,414...129,681,727
Ensembl chr 7:127,738,226...127,802,218 		JBrowse link
G Ucp2 uncoupling protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24395786)		 UniProt
RGD		 PMID:24395786 GO_REF:0000024 NCBI chr 1:164,251,373...164,257,742
Ensembl chr 1:154,839,209...154,845,611 		JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3604881 (PMID:12559843)		 Ensembl
RGD		 PMID:12559843 GO_REF:0000107 NCBI chr12:32,295,779...32,313,257
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Glul glutamate-ammonia ligase IDA RGD PMID:28323 RGD:2301547 NCBI chr13:68,519,500...68,585,554
Ensembl chr13:66,025,630...66,035,108 		JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:4403443 PMID:28323 GO_REF:0000002 GO_REF:0000033, RGD:2301548, RGD:2301547 NCBI chr13:68,519,500...68,585,554
Ensembl chr13:66,025,630...66,035,108 		JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain involved_in
NOT|involved_in		 IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:40,912,398...40,943,955
Ensembl chr 9:33,420,484...33,447,907 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA
ISS		 (PMID:22228304)
MGI:3514104 (PMID:16641247)
GO_REF:0000033
GO_REF:0000107
(PMID:22049910)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:16641247 PMID:22049910 PMID:22228304 PMID:1918000 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:728510 NCBI chr 9:56,836,584...56,908,861
Ensembl chr 9:49,344,781...49,416,900 		JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:1,201,757...1,218,014
Ensembl chr 7:617,288...633,426 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:31,570,010...31,604,410
Ensembl chr14:31,216,165...31,250,144 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21757002)		 Ensembl
RGD		 PMID:21757002 GO_REF:0000107 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        primary metabolic process 10746
          amino acid metabolic process 301
            proteinogenic amino acid metabolic process 177
              glutamine family amino acid metabolic process 76
                glutamine metabolic process 22
                  D-glutamine metabolic process 0
                  ammonia assimilation cycle + 3
                  cyclization of glutamine involved in intein-mediated protein splicing 0
                  glutamine biosynthetic process + 2
                  glutamine catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        small molecule metabolic process 1918
          organic acid metabolic process 1043
            oxoacid metabolic process 1022
              carboxylic acid metabolic process 1007
                alpha-amino acid metabolic process 222
                  L-amino acid metabolic process 184
                    glutamine family amino acid metabolic process 76
                      glutamine metabolic process 22
                        D-glutamine metabolic process 0
                        ammonia assimilation cycle + 3
                        cyclization of glutamine involved in intein-mediated protein splicing 0
                        glutamine biosynthetic process + 2
                        glutamine catabolic process 3
paths to the root