Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:glutamate metabolic process
go back to main search page
Accession:GO:0006536 term browser browse the term
Definition:The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid.
Synonyms:exact_synonym: glutamate metabolism;   glutamic acid metabolic process;   glutamic acid metabolism
 xref: Wikipedia:Glutamic_acid

show annotations for term's descendants           Sort by:
 
glutamate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase ISO
ISS		 (PMID:18620547)
GO_REF:0000024		 RGD
UniProt		 PMID:18620547 GO_REF:0000024 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702 		JBrowse link
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 ISO (PMID:11092761) RGD PMID:11092761 NCBI chr 1:259,641,673...259,674,521
Ensembl chr 1:259,641,676...259,674,425
Ensembl chr 1:259,641,676...259,674,425 		JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 IEA
ISO		 GO_REF:0000107
MGI:2180159 (MGI:3767902|PMID:17854388)		 Ensembl
RGD		 PMID:17854388 GO_REF:0000107 MGI:3767902 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413 		JBrowse link
G Dglucy D-glutamate cyclase ISO
IBA		 (MGI:5901965|PMID:28266638)
PMID:21873635		 RGD PMID:28266638, PMID:21873635 MGI:5901965, RGD:13792537 NCBI chr 6:124,786,164...124,870,244
Ensembl chr 6:124,786,097...124,872,277 		JBrowse link
G Fpgs folylpolyglutamate synthase ISO (PMID:3619447) RGD PMID:3619447 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327 		JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit ISS
ISO		 GO_REF:0000024
(PMID:12663448), (PMID:2294991), (PMID:9841880)		 UniProt
RGD		 PMID:2294991 PMID:9841880 PMID:12663448 GO_REF:0000024 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468 		JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit ISS
ISO		 GO_REF:0000024
(PMID:9841880), (PMID:9895302)		 UniProt
RGD		 PMID:9841880 PMID:9895302 GO_REF:0000024 NCBI chr 2:225,827,504...225,847,876
Ensembl chr 2:225,827,504...225,847,874 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISS
ISO		 GO_REF:0000024
(PMID:21447318), (PMID:24047895)		 UniProt
RGD		 PMID:21447318 PMID:24047895 GO_REF:0000024 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068 		JBrowse link
G Glul glutamate-ammonia ligase IDA RGD PMID:4403443 RGD:2301548 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340 		JBrowse link
G Mthfs methenyltetrahydrofolate synthetase ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348 		JBrowse link
G Nags N-acetylglutamate synthase ISO
IBA		 (MGI:2388220|PMID:12049647)
PMID:21873635		 RGD PMID:12049647, PMID:21873635 MGI:2388220, RGD:13792537 NCBI chr10:90,084,607...90,089,693
Ensembl chr10:90,085,559...90,089,693 		JBrowse link
G Tat tyrosine aminotransferase ISO
ISS		 (PMID:7999802)
(MGI:5430853|PMID:21153519)
GO_REF:0000024		 RGD
UniProt		 PMID:7999802 PMID:21153519 GO_REF:0000024 MGI:5430853 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229 		JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IEA
ISO		 GO_REF:0000107
MGI:3604881 (MGI:3604426|PMID:12559843)		 Ensembl
RGD		 PMID:12559843 GO_REF:0000107 MGI:3604426 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341 		JBrowse link
G Glul glutamate-ammonia ligase TAS
IDA		 RGD PMID:1674354, PMID:28323 RGD:632694, RGD:2301547 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070 		JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase IEA
IBA
ISO
ISS		 GO_REF:0000107
PMID:21873635
(MGI:5320252|PMID:22228304)
(PMID:16899818), (PMID:22049910)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16899818 PMID:22049910 PMID:22228304, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5320252, RGD:13792537 NCBI chr 9:54,212,622...54,284,879
Ensembl chr 9:54,212,767...54,284,872 		JBrowse link
G Gls2 glutaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:2,605,679...2,621,853
Ensembl chr 7:2,605,719...2,621,852 		JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO (PMID:11032875) RGD PMID:11032875 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557 		JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 TAS
IBA
ISO		 PMID:21873635
(PMID:11032875), (PMID:6121377)		 RGD PMID:6121377 PMID:11032875, PMID:12684230, PMID:21873635 RGD:1601355, RGD:13792537 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557 		JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 IDA
ISO		 (MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IDA
ISO		 (MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 ISO (MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:53641 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO (MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:53641 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340 		JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 ISS
ISO		 GO_REF:0000024
(PMID:16435184)		 UniProt
RGD		 PMID:16435184 GO_REF:0000024 NCBI chr 5:9,403,194...9,429,783
Ensembl chr 5:9,403,196...9,429,859 		JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 IDA RGD PMID:8999827 RGD:1625237 NCBI chr17:89,171,576...89,234,770
Ensembl chr17:89,171,250...89,238,040 		JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466 		JBrowse link
G Hal histidine ammonia lyase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413 		JBrowse link
G Uroc1 urocanate hydratase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361 		JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466 		JBrowse link
G Hal histidine ammonia lyase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413 		JBrowse link
G Uroc1 urocanate hydratase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361 		JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ATCAY kinesin light chain interacting caytaxin ISO
ISS		 (PMID:16899818)
GO_REF:0000024		 RGD
UniProt		 PMID:16899818 GO_REF:0000024 NCBI chr 7:11,356,017...11,379,782
Ensembl chr 7:11,356,118...11,380,913 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEA
ISO		 GO_REF:0000107
(MGI:5306122|PMID:21757002)		 Ensembl
RGD		 PMID:21757002 GO_REF:0000107 MGI:5306122 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056 		JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 ISO (MGI:5306122|PMID:21757002) RGD PMID:21757002 MGI:5306122 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,090,238...158,115,725
Ensembl chr 5:158,042,587...158,135,733 		JBrowse link
G Iffo2 intermediate filament family orphan 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,042,587...158,083,311
Ensembl chr 5:158,042,587...158,135,733 		JBrowse link
G Prodh1 proline dehydrogenase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:87,058,478...87,075,785
Ensembl chr11:87,058,616...87,075,785 		JBrowse link
G Prodh2 proline dehydrogenase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:88,955,125...88,968,501
Ensembl chr 1:88,955,135...88,968,501 		JBrowse link
G Tas1r2 taste 1 receptor member 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,119,894...158,135,733
Ensembl chr 5:158,042,587...158,135,733 		JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway IDA RGD PMID:19858196 RGD:6484536 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 ISO MGI:3608695 (MGI:4948153|PMID:21490221), (MGI:5562570|PMID:24548853), (MGI:5616960|PMID:25429150) RGD PMID:21490221 PMID:24548853 PMID:25429150 MGI:4948153 MGI:5562570 MGI:5616960 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    metabolic process 12102
      primary metabolic process 10848
        cellular amino acid metabolic process 269
          alpha-amino acid metabolic process 191
            glutamine family amino acid metabolic process 75
              glutamate metabolic process 35
                D-glutamate metabolic process 0
                ammonia assimilation cycle + 3
                arginine catabolic process to glutamate 1
                glutamate biosynthetic process + 4
                glutamate catabolic process + 5
                histidine catabolic process to glutamate and formamide 4
                histidine catabolic process to glutamate and formate 4
                negative regulation of glutamate metabolic process + 1
                positive regulation of glutamate metabolic process + 1
                proline catabolic process to glutamate + 5
                regulation of glutamate metabolic process + 4
                tetrapyrrole biosynthetic process from glutamate + 0
Path 2
Term Annotations click to browse term
  biological_process 20045
    metabolic process 12102
      cellular metabolic process 11041
        organic acid metabolic process 1013
          oxoacid metabolic process 975
            carboxylic acid metabolic process 956
              cellular amino acid metabolic process 269
                alpha-amino acid metabolic process 191
                  glutamine family amino acid metabolic process 75
                    glutamate metabolic process 35
                      D-glutamate metabolic process 0
                      ammonia assimilation cycle + 3
                      arginine catabolic process to glutamate 1
                      glutamate biosynthetic process + 4
                      glutamate catabolic process + 5
                      histidine catabolic process to glutamate and formamide 4
                      histidine catabolic process to glutamate and formate 4
                      negative regulation of glutamate metabolic process + 1
                      positive regulation of glutamate metabolic process + 1
                      proline catabolic process to glutamate + 5
                      regulation of glutamate metabolic process + 4
                      tetrapyrrole biosynthetic process from glutamate + 0
paths to the root