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ONTOLOGY REPORT - ANNOTATIONS

Term:aspartate metabolic process
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Accession:GO:0006531 term browser browse the term
Definition:The chemical reactions and pathways involving aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.
Synonyms:exact_synonym: aspartate metabolism


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aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 IDA RGD PMID:3759987 RGD:5135303 NCBI chr 6:131,679,795...131,702,012
Ensembl chr 6:131,679,701...131,701,998 		JBrowse link
G Adss2 adenylosuccinate synthase 2 IDA RGD PMID:71897 RGD:5135533 NCBI chr13:89,769,240...89,799,577
Ensembl chr13:89,769,244...89,799,604 		JBrowse link
G Aspa aspartoacylase involved_in ISO MGI:2447776 (PMID:28077719) RGD PMID:28077719 NCBI chr10:57,891,704...57,945,267
Ensembl chr10:57,892,104...57,945,272 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO (PMID:7977368) RGD PMID:7977368 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Ddo D-aspartate oxidase acts_upstream_of_or_within ISO MGI:3625623 (PMID:16525061) RGD PMID:16525061 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in IDA
ISS		 GO_REF:0000024 UniProt
RGD		 PMID:2837211 GO_REF:0000024, RGD:2289377 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in IMP
ISS		 GO_REF:0000024 UniProt
RGD		 PMID:12686151 GO_REF:0000024, RGD:2289396 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
G Nat8l N-acetyltransferase 8-like involved_in ISO MGI:87914 (PMID:28077719) RGD PMID:28077719 NCBI chr14:76,756,077...76,762,712
Ensembl chr14:76,756,077...76,763,411 		JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:4193185)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:4193185 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:64,860,308...64,873,656
Ensembl chr16:64,860,704...64,866,162 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO
IBA		 (PMID:9163533)
GO_REF:0000033		 RGD
GO_Central		 PMID:9163533 GO_REF:0000033 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO
IEA		 (PMID:2241899)
GO_REF:0000107		 RGD
Ensembl		 PMID:2241899 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IBA		 (PMID:2567216)
GO_REF:0000033		 RGD
GO_Central		 PMID:2567216 GO_REF:0000033 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:4193185)		 Ensembl
RGD		 PMID:4193185 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      primary metabolic process 10923
        amino acid metabolic process 302
          proteinogenic amino acid metabolic process 174
            aspartate family amino acid metabolic process 43
              aspartate metabolic process 9
                'de novo' NAD biosynthetic process from aspartate 0
                aspartate biosynthetic process 3
                aspartate catabolic process + 3
                glutamate catabolic process to aspartate 2
Path 2
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      small molecule metabolic process 1902
        organic acid metabolic process 1033
          oxoacid metabolic process 1022
            carboxylic acid metabolic process 1007
              alpha-amino acid metabolic process 220
                L-amino acid metabolic process 192
                  aspartate family amino acid metabolic process 43
                    aspartate metabolic process 9
                      'de novo' NAD biosynthetic process from aspartate 0
                      aspartate biosynthetic process 3
                      aspartate catabolic process + 3
                      glutamate catabolic process to aspartate 2
paths to the root