Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:asparagine metabolic process
go back to main search page
Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
 
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chrNW_004936621:1,140,651...1,163,608 JBrowse link
G Nit2 nitrilase family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:2,944,447...2,963,339 JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asdurf ASNSD1 upstream open reading frame involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936506:8,304,508...8,313,613 JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:2573597) RGD
InterPro
Ensembl
UniProt
MGI		 PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2316002 NCBI chrNW_004936585:2,834,202...2,854,740 JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:12753071 MGI
Ensembl		 PMID:12753071 GO_REF:0000107 RGD:1299508 NCBI chrNW_004936581:823,665...847,579 JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936585:2,834,202...2,854,740 JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14973
    metabolic process 9446
      primary metabolic process 8484
        cellular amino acid metabolic process 249
          alpha-amino acid metabolic process 171
            aspartate family amino acid metabolic process 34
              asparagine metabolic process 6
                (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                L-asparagine metabolic process + 2
                asparagine biosynthetic process + 2
                asparagine catabolic process + 1
                cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 14973
    metabolic process 9446
      cellular metabolic process 7935
        organic acid metabolic process 795
          oxoacid metabolic process 776
            carboxylic acid metabolic process 765
              cellular amino acid metabolic process 249
                alpha-amino acid metabolic process 171
                  aspartate family amino acid metabolic process 34
                    asparagine metabolic process 6
                      (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                      L-asparagine metabolic process + 2
                      asparagine biosynthetic process + 2
                      asparagine catabolic process + 1
                      cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root