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ONTOLOGY REPORT - ANNOTATIONS


Term:asparagine metabolic process
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Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY


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asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chrNW_004936621:1,140,651...1,163,608
Ensembl chrNW_004936621:1,140,658...1,163,589
JBrowse link
G Nit2 nitrilase family member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936630:2,944,447...2,963,339
Ensembl chrNW_004936630:2,943,121...2,963,367
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asdurf ASNSD1 upstream open reading frame involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936506:8,304,508...8,313,613
Ensembl chrNW_004936506:8,304,353...8,308,845
JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:2573597) RGD
TreeGrafter
InterPro
Ensembl
UniProt
MGI
PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2316002 NCBI chrNW_004936585:2,834,202...2,854,740
Ensembl chrNW_004936585:2,834,008...2,855,387
JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:12753071 MGI
TreeGrafter
Ensembl
PMID:12753071 GO_REF:0000107 GO_REF:0000118 RGD:1299508 NCBI chrNW_004936581:823,665...847,579
Ensembl chrNW_004936581:821,771...847,704
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936585:2,834,202...2,854,740
Ensembl chrNW_004936585:2,834,008...2,855,387
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16019
    cellular process 15627
      metabolic process 9955
        primary metabolic process 8851
          amino acid metabolic process 285
            proteinogenic amino acid metabolic process 166
              aspartate family amino acid metabolic process 46
                asparagine metabolic process 7
                  L-asparagine metabolic process + 2
                  asparagine biosynthetic process + 3
                  asparagine catabolic process + 1
                  cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 16019
    cellular process 15627
      metabolic process 9955
        small molecule metabolic process 1628
          organic acid metabolic process 881
            oxoacid metabolic process 863
              carboxylic acid metabolic process 852
                alpha-amino acid metabolic process 208
                  L-amino acid metabolic process 181
                    aspartate family amino acid metabolic process 46
                      asparagine metabolic process 7
                        L-asparagine metabolic process + 2
                        asparagine biosynthetic process + 3
                        asparagine catabolic process + 1
                        cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root