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ONTOLOGY REPORT - ANNOTATIONS


Term:asparagine metabolic process
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Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY



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asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414
G DEDD death effector domain containing involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:89,311,308...89,323,692
Ensembl chr 4:89,311,310...89,323,724
JBrowse link
G NIT2 nitrilase family member 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr13:158,630,997...158,653,164
Ensembl chr13:158,630,743...158,653,095
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(PMID:2573597)
GO_Central
UniProt
Ensembl
InterPro
GO_Central
MGI
RGD
PMID:2573597 PMID:2887559 PMID:21873635 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2316002 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,509,020
JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA UniProt
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr15:94,261,910...94,272,129
Ensembl chr15:94,261,905...94,272,129
Ensembl chr15:94,261,905...94,272,129
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
PMID:12753071
GO_Central
Ensembl
GO_Central
MGI
Ensembl
PMID:12753071 PMID:21873635 GO_REF:0000107 RGD:1299508 NCBI chr 2:9,328,260...9,353,384
Ensembl chr 2:9,328,269...9,353,340
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,509,020
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,738,880...8,745,225
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17268
    metabolic process 10885
      primary metabolic process 9701
        cellular amino acid metabolic process 279
          alpha-amino acid metabolic process 199
            aspartate family amino acid metabolic process 43
              asparagine metabolic process 7
                (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                L-asparagine metabolic process + 2
                asparagine biosynthetic process + 2
                asparagine catabolic process + 1
                cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 17268
    metabolic process 10885
      cellular metabolic process 9224
        organic acid metabolic process 922
          oxoacid metabolic process 897
            carboxylic acid metabolic process 880
              cellular amino acid metabolic process 279
                alpha-amino acid metabolic process 199
                  aspartate family amino acid metabolic process 43
                    asparagine metabolic process 7
                      (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                      L-asparagine metabolic process + 2
                      asparagine biosynthetic process + 2
                      asparagine catabolic process + 1
                      cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root