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ONTOLOGY REPORT - ANNOTATIONS


Term:asparagine metabolic process
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Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY



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asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr14:104,085,700...104,115,582
Ensembl chr14:104,085,686...104,115,582
JBrowse link
G NIT2 nitrilase family member 2 involved_in IDA
IBA
(PMID:22674578)
(PMID:21873635)
BHF-UCL
BHF-UCL
GO_Central
GO_Central
PMID:21873635 PMID:22674578 NCBI chr 3:100,334,757...100,361,635
Ensembl chr 3:100,334,739...100,361,635
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within
IBA
IEA
IDA
IC
ISO
(PMID:21873635)
(PMID:2573597)
(PMID:2564390)
GO_Central
UniProt
MGI
GO_Central
InterPro
MGI
RGD
UniProt
PMID:2564390 PMID:2573597 PMID:2887559 PMID:21873635 GO_REF:0000002 GO_REF:0000043 RGD:2316002 NCBI chr 7:97,851,677...97,928,441
Ensembl chr 7:97,851,677...97,872,542
JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA InterPro
InterPro
UniProt
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:189,661,459...189,670,831
Ensembl chr 2:189,661,385...189,670,831
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
ISS
IBA
IDA
ISO
(PMID:21873635)
(PMID:19839645)
PMID:12753071
UniProt
GO_Central
UniProt
MGI
GO_Central
PMID:12753071 PMID:19839645 PMID:21873635 GO_REF:0000024 RGD:1299508 NCBI chr11:62,337,448...62,401,431
Ensembl chr11:62,337,448...62,393,412
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 7:97,851,677...97,928,441
Ensembl chr 7:97,851,677...97,872,542
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in IDA (PMID:11960987) UniProt
UniProt
PMID:11960987 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19656
    metabolic process 13108
      primary metabolic process 11503
        cellular amino acid metabolic process 329
          alpha-amino acid metabolic process 223
            aspartate family amino acid metabolic process 51
              asparagine metabolic process 6
                (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                L-asparagine metabolic process + 2
                asparagine biosynthetic process + 2
                asparagine catabolic process + 1
                cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 19656
    metabolic process 13108
      cellular metabolic process 10997
        organic acid metabolic process 1095
          oxoacid metabolic process 1069
            carboxylic acid metabolic process 1042
              cellular amino acid metabolic process 329
                alpha-amino acid metabolic process 223
                  aspartate family amino acid metabolic process 51
                    asparagine metabolic process 6
                      (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                      L-asparagine metabolic process + 2
                      asparagine biosynthetic process + 2
                      asparagine catabolic process + 1
                      cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root