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ONTOLOGY REPORT - ANNOTATIONS


Term:asparagine metabolic process
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Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY



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asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr14:104,085,700...104,115,582
Ensembl chr14:104,085,686...104,115,582
JBrowse link
G NIT2 nitrilase family member 2 involved_in IDA
IBA
(PMID:22674578) BHF-UCL
GO_Central
PMID:22674578 GO_REF:0000033 NCBI chr 3:100,334,757...100,361,635
Ensembl chr 3:100,334,739...100,361,635
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC012488.2 novel protein involved_in IEA UniProt GO_REF:0000043 Ensembl chr 2:189,661,519...189,667,881 JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
IDA
IC
(PMID:2573597)
(PMID:2564390)
RGD
GO_Central
UniProt
MGI
InterPro
PMID:2564390 PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 RGD:2316002 NCBI chr 7:97,851,677...97,928,441
Ensembl chr 7:97,851,677...97,872,542
JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:189,661,459...189,670,831
Ensembl chr 2:189,661,385...189,670,831
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
IDA
ISS
PMID:12753071
(PMID:19839645)
MGI
GO_Central
UniProt
PMID:12753071 PMID:19839645 GO_REF:0000024 GO_REF:0000033 RGD:1299508 NCBI chr11:62,337,448...62,401,431
Ensembl chr11:62,337,448...62,393,412
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:97,851,677...97,928,441
Ensembl chr 7:97,851,677...97,872,542
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in IDA (PMID:11960987) UniProt PMID:11960987 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,686
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19697
    cellular process 18947
      metabolic process 12898
        primary metabolic process 11220
          amino acid metabolic process 319
            proteinogenic amino acid metabolic process 187
              aspartate family amino acid metabolic process 46
                asparagine metabolic process 7
                  L-asparagine metabolic process + 2
                  asparagine biosynthetic process + 3
                  asparagine catabolic process + 1
                  cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 19697
    cellular process 18947
      metabolic process 12898
        small molecule metabolic process 1996
          organic acid metabolic process 1050
            oxoacid metabolic process 1041
              carboxylic acid metabolic process 1018
                alpha-amino acid metabolic process 236
                  L-amino acid metabolic process 204
                    aspartate family amino acid metabolic process 46
                      asparagine metabolic process 7
                        L-asparagine metabolic process + 2
                        asparagine biosynthetic process + 3
                        asparagine catabolic process + 1
                        cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root