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ONTOLOGY REPORT - ANNOTATIONS

Term:asparagine metabolic process
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Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY


show annotations for term's descendants           Sort by:
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase involved_in IDA PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr 6:131,176,727...131,196,268
Ensembl chr 6:131,176,874...131,196,268 		JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
IEA		 (PMID:22674578)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:22674578 GO_REF:0000033 GO_REF:0000107 NCBI chr11:43,363,839...43,378,713
Ensembl chr11:43,363,985...43,375,024 		JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:2573597)		 GO_Central
RGD		 PMID:2573597 PMID:2887559 GO_REF:0000033, RGD:2316002 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423 		JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:48,126,808...48,139,073
Ensembl chr 9:48,126,808...48,139,073 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA		 (PMID:19839645)
GO_REF:0000033
PMID:12753071		 RGD
GO_Central		 PMID:19839645 PMID:12753071 PMID:12753071 GO_REF:0000033, RGD:1299508, RGD:1299508 NCBI chr 1:206,006,103...206,027,115
Ensembl chr 1:206,006,109...206,027,108 		JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423 		JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISO (PMID:11960987) RGD PMID:11960987 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      primary metabolic process 10923
        amino acid metabolic process 302
          proteinogenic amino acid metabolic process 174
            aspartate family amino acid metabolic process 43
              asparagine metabolic process 6
                L-asparagine metabolic process + 2
                asparagine biosynthetic process + 2
                asparagine catabolic process + 1
                cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      small molecule metabolic process 1901
        organic acid metabolic process 1033
          oxoacid metabolic process 1022
            carboxylic acid metabolic process 1007
              alpha-amino acid metabolic process 220
                L-amino acid metabolic process 192
                  aspartate family amino acid metabolic process 43
                    asparagine metabolic process 6
                      L-asparagine metabolic process + 2
                      asparagine biosynthetic process + 2
                      asparagine catabolic process + 1
                      cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root