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ONTOLOGY REPORT - ANNOTATIONS


Term:asparagine metabolic process
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Accession:GO:0006528 term browser browse the term
Definition:The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.
Synonyms:exact_synonym: asparagine metabolism
 xref: MetaCyc:ASPARAGINESYN-PWY



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asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase involved_in IDA PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr 6:131,176,727...131,196,268
Ensembl chr 6:131,176,874...131,196,268
JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
(PMID:22674578)
PMID:21873635
RGD PMID:22674578 PMID:21873635 RGD:13792537 NCBI chr11:43,363,839...43,378,713
Ensembl chr11:43,363,985...43,375,024
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(PMID:2573597)
PMID:21873635
RGD PMID:2573597 PMID:2887559 PMID:21873635 RGD:2316002, RGD:13792537 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423
JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:48,126,802...48,139,073
Ensembl chr 9:48,126,808...48,139,073
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
PMID:21873635
PMID:12753071
(PMID:19839645)
RGD PMID:19839645 PMID:21873635 PMID:12753071 PMID:12753071 RGD:13792537, RGD:1299508, RGD:1299508 NCBI chr 1:206,006,103...206,027,115
Ensembl chr 1:206,006,109...206,027,108
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISO (PMID:11960987) RGD PMID:11960987 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    metabolic process 11461
      primary metabolic process 10262
        cellular amino acid metabolic process 273
          alpha-amino acid metabolic process 199
            aspartate family amino acid metabolic process 41
              asparagine metabolic process 6
                (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                L-asparagine metabolic process + 2
                asparagine biosynthetic process + 2
                asparagine catabolic process + 1
                cyclization of asparagine involved in intein-mediated protein splicing 0
Path 2
Term Annotations click to browse term
  biological_process 18737
    metabolic process 11461
      cellular metabolic process 9699
        organic acid metabolic process 1010
          oxoacid metabolic process 982
            carboxylic acid metabolic process 967
              cellular amino acid metabolic process 273
                alpha-amino acid metabolic process 199
                  aspartate family amino acid metabolic process 41
                    asparagine metabolic process 6
                      (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
                      L-asparagine metabolic process + 2
                      asparagine biosynthetic process + 2
                      asparagine catabolic process + 1
                      cyclization of asparagine involved in intein-mediated protein splicing 0
paths to the root