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ONTOLOGY REPORT - ANNOTATIONS


Term:alanine catabolic process
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Accession:GO:0006524 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of alanine, 2-aminopropanoic acid.
Synonyms:exact_synonym: alanine breakdown;   alanine catabolism;   alanine degradation


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D-alanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
ISO
IBA
GO_REF:0000107
(PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)
PMID:21873635
Ensembl
RGD
PMID:16616139 PMID:20603179, PMID:21873635 GO_REF:0000107 MGI:5442503, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873 PMID:18492492 PMID:22198249 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Gpt glutamic--pyruvic transaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:117,759,083...117,761,932
Ensembl chr 7:117,759,083...117,761,931
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 ISO
IBA
(PMID:20018850)
PMID:21873635
RGD PMID:20018850, PMID:21873635 RGD:13792537 NCBI chr 2:60,337,667...60,379,144
Ensembl chr 2:60,337,667...60,379,420
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      primary metabolic process 10847
        cellular amino acid metabolic process 269
          cellular amino acid catabolic process 94
            alanine catabolic process 4
              D-alanine catabolic process 1
              D-alanine family amino acid catabolic process 0
              L-alanine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      cellular metabolic process 11040
        organic acid metabolic process 1013
          oxoacid metabolic process 975
            carboxylic acid metabolic process 956
              cellular amino acid metabolic process 269
                alpha-amino acid metabolic process 191
                  pyruvate family amino acid metabolic process 5
                    pyruvate family amino acid catabolic process 4
                      alanine catabolic process 4
                        D-alanine catabolic process 1
                        D-alanine family amino acid catabolic process 0
                        L-alanine catabolic process + 3
paths to the root