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ONTOLOGY REPORT - ANNOTATIONS


Term:alanine metabolic process
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Accession:GO:0006522 term browser browse the term
Definition:The chemical reactions and pathways involving alanine, 2-aminopropanoic acid.
Synonyms:exact_synonym: alanine metabolism



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D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IBA
ISO
PMID:21873635
(PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)
RGD PMID:16616139 PMID:20603179 PMID:21873635 MGI:5442503, RGD:13792537 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873 PMID:18492492 PMID:22198249 NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336
JBrowse link
G Gpt glutamic--pyruvic transaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494
JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IBA
(PMID:20018850)
PMID:21873635
RGD PMID:20018850 PMID:21873635 RGD:13792537 NCBI chr 2:59,336,252...59,377,664
Ensembl chr 2:59,336,283...59,377,926
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpt2 glutamic--pyruvic transaminase 2 involved_in ISO (PMID:11863375) RGD PMID:11863375 NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    metabolic process 12359
      primary metabolic process 11118
        amino acid metabolic process 290
          alpha-amino acid metabolic process 210
            pyruvate family amino acid metabolic process 5
              alanine metabolic process 5
                D-alanine metabolic process + 1
                L-alanine metabolic process + 4
                alanine biosynthetic process + 0
                alanine catabolic process + 5
                arginine catabolic process to alanine via ornithine 0
Path 2
Term Annotations click to browse term
  biological_process 20091
    metabolic process 12359
      cellular metabolic process 10396
        organic acid metabolic process 1045
          oxoacid metabolic process 1030
            carboxylic acid metabolic process 1015
              amino acid metabolic process 290
                alpha-amino acid metabolic process 210
                  pyruvate family amino acid metabolic process 5
                    alanine metabolic process 5
                      D-alanine metabolic process + 1
                      L-alanine metabolic process + 4
                      alanine biosynthetic process + 0
                      alanine catabolic process + 5
                      arginine catabolic process to alanine via ornithine 0
paths to the root