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ONTOLOGY REPORT - ANNOTATIONS

Term:amino acid metabolic process
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Accession:GO:0006520 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
Synonyms:exact_synonym: cellular amino acid metabolic process;   cellular amino acid metabolism
 related_synonym: amino acid and derivative metabolism;   cellular amino acid and derivative metabolic process
 alt_id: GO:0006519


show annotations for term's descendants           Sort by:
amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:18,239,247...18,267,211
Ensembl chr 2:18,248,521...18,264,064 		JBrowse link
G ACCSL 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:18,271,066...18,431,580
Ensembl chr 2:18,271,070...18,281,431 		JBrowse link
G ACY1 aminoacylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:34,114,119...34,119,684
Ensembl chr13:34,113,677...34,119,830 		JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:18,408,987...18,448,285
Ensembl chr 2:18,408,987...18,446,056 		JBrowse link
G ASL argininosuccinate lyase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12559843) Ensembl
MGI		 PMID:12559843 GO_REF:0000107 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:7818476 RGD:1298553 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,343,035 		JBrowse link
G ASPG asparaginase involved_in IEA InterPro GO_REF:0000002
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28701731) Ensembl
MGI		 PMID:28701731 GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858 		JBrowse link
G DDC dopa decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G DIO1 iodothyronine deiodinase 1 involved_in ISO (PMID:26305885) ARUK-UCL PMID:26305885 NCBI chr 6:158,376,744...158,392,745
Ensembl chr 6:158,375,602...158,392,754 		JBrowse link
G FIGNL1 fidgetin like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:136,484,217...136,488,262
Ensembl chr 9:136,484,216...136,488,250 		JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,638,184...49,663,007
Ensembl chr14:49,640,586...49,663,003 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,520 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:48,500,156...48,506,992
Ensembl chr15:48,499,964...48,507,010 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:14522984 GO_REF:0000002 RGD:1582383 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G HDC histidine decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:121,505,677...121,525,416
Ensembl chr 1:121,505,751...121,525,252 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8188247) Ensembl
MGI
UniProt		 PMID:8188247 GO_REF:0000107 GO_REF:0000117 NCBI chr13:139,660,315...139,710,402
Ensembl chr13:139,660,343...139,710,404 		JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,759 		JBrowse link
G LOC100519130 N-fatty-acyl-amino acid synthase/hydrolase PM20D1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:68,378,949...68,405,876 JBrowse link
G OTC ornithine transcarbamylase involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:66,522,015...66,550,511 JBrowse link
G SDS serine dehydratase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,933...38,513,878 		JBrowse link
G SDSL serine dehydratase like involved_in IEA InterPro GO_REF:0000002 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155 		JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,881...48,408,039 		JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:48,416,774...48,462,851
Ensembl chr12:48,416,790...48,462,846 		JBrowse link
G SLC16A2 solute carrier family 16 member 2 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:26305885) ARUK-UCL
Ensembl		 PMID:26305885 GO_REF:0000107 NCBI chr  X:59,748,685...59,861,018
Ensembl chr  X:59,748,745...59,861,015 		JBrowse link
G TAT tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,589...14,583,177 		JBrowse link
G THA1 threonine aldolase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:3,728,742...3,734,209 JBrowse link
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000104 NCBI chr12:3,759,688...3,785,829
Ensembl chr12:3,759,708...3,785,835 		JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 3:97,580,756...97,595,033
Ensembl chr 3:97,580,851...97,595,021 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA
IBA		 TreeGrafter
UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr17:9,245,283...9,260,140
Ensembl chr17:9,245,196...9,260,473 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IEA
IBA		 TreeGrafter
UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr17:9,277,039...9,344,405
Ensembl chr17:9,277,069...9,343,749 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,434,769...12,490,409 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000104 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:108,958,812...108,986,373
Ensembl chr14:108,958,973...108,986,707 		JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:16906134) RGD
MGI
GO_Central
TreeGrafter
Ensembl
InterPro		 PMID:2040280 PMID:16906134 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2302982 NCBI chr 6:13,298,336...13,321,423
Ensembl chr 6:13,298,330...13,321,383 		JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:39,301,020...39,314,296
Ensembl chr 7:39,301,009...39,313,860 		JBrowse link
G AARSD1 alanyl-tRNA synthetase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:19,918,235...19,926,828
Ensembl chr12:19,918,248...19,926,825 		JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,776...19,792,256 		JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24467666) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:24467666 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:55,604,394...55,645,536
Ensembl chr 8:55,604,626...55,645,473 		JBrowse link
amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215 		JBrowse link
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G OTC ornithine transcarbamylase involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:1,060,028...1,064,808
Ensembl chr12:1,060,570...1,064,805 		JBrowse link
amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:105,613,211...105,642,533
Ensembl chr 6:105,613,215...105,645,113 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:56,450,508...56,540,275
Ensembl chr 7:56,450,520...56,540,253 		JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:58,501,892...58,517,580
Ensembl chr 6:58,501,811...58,517,579 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,406...54,916,081 		JBrowse link
G LOC100525099 L-amino-acid oxidase-like involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:52,247,737...52,255,792 JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12559843) Ensembl
MGI		 PMID:12559843 GO_REF:0000107 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547 		JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 3:97,580,756...97,595,033
Ensembl chr 3:97,580,851...97,595,021 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,434,769...12,490,409 		JBrowse link
G KYNU kynureninase involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891 		JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
UniProt
Ensembl
InterPro		 PMID:12470967 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:631755 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078 		JBrowse link
G NAGS N-acetylglutamate synthase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr12:19,170,398...19,173,968
Ensembl chr12:19,169,961...19,174,747 		JBrowse link
G OTC ornithine transcarbamylase involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G OTC ornithine transcarbamylase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,579,729...130,617,531 		JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11209059) Ensembl
MGI		 PMID:11209059 GO_REF:0000107 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,902...49,087,783 		JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,944 		JBrowse link
G NOS2 nitric oxide synthase 2 involved_in ISO (MGI:3807772|PMID:1383204)
(PMID:7504305)		 BHF-UCL PMID:1383204 PMID:7504305 MGI:3807772 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146 		JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:15753084 GO_REF:0000033 GO_REF:0000118 RGD:8693655 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988 		JBrowse link
G ARG2 arginase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:15753084 GO_REF:0000033 GO_REF:0000118 RGD:8693655 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,988...91,385,909 		JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:74,773,359...74,784,486
Ensembl chr 6:74,773,324...74,784,457 		JBrowse link
G ARG1 arginase 1 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:4062872 GO_REF:0000002 GO_REF:0000043 RGD:2300098 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988 		JBrowse link
G ARG2 arginase 2 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:16537391 GO_REF:0000002 GO_REF:0000043 RGD:1582129 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,988...91,385,909 		JBrowse link
G ASL argininosuccinate lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:17322279 GO_REF:0000118 RGD:1625578 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,579,729...130,617,531 		JBrowse link
G DDAH2 DDAH family member 2, ADMA-independent involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,996...23,842,516 		JBrowse link
G SLC39A8 solute carrier family 39 member 8 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5912781|PMID:28481222) UniProt
Ensembl		 PMID:28481222 GO_REF:0000107 MGI:5912781 NCBI chr 8:118,604,852...118,678,115
Ensembl chr 8:118,605,402...118,678,107 		JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase ISO RGD PMID:4062872 PMID:8586639 RGD:1599287 RGD:2300098 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:4062872 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2300098 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DALRD3 DALR anticodon binding domain containing 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:31,650,880...31,656,320
Ensembl chr13:31,650,967...31,656,306 		JBrowse link
G RARS1 arginyl-tRNA synthetase 1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
Ensembl
InterPro		 PMID:7082655 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2303394 NCBI chr16:55,373,739...55,412,076
Ensembl chr16:55,373,727...55,412,112 		JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:55,906,508...55,982,094
Ensembl chr 1:55,893,480...55,982,068 		JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAT tyrosine aminotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,589...14,583,177 		JBrowse link
aromatic amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,902...49,087,783 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:100,392,217...100,404,025
Ensembl chr 7:100,392,271...100,408,420 		JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:30,845,608...30,857,658
Ensembl chr14:30,845,613...30,857,667 		JBrowse link
G HPDL 4-hydroxyphenylpyruvate dioxygenase like involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:166,012,590...166,015,051
Ensembl chr 6:166,012,601...166,014,323 		JBrowse link
G IL4I1 interleukin 4 induced 1 acts_upstream_of_or_within ISO (PMID:15383589) MGI PMID:15383589 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,406...54,916,081 		JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,385,435...81,463,451 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:41,075,623...41,109,005
Ensembl chr 2:41,075,628...41,109,437 		JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:35,917,159...36,016,981
Ensembl chr 5:35,918,370...36,017,509 		JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:2573597) RGD
GO_Central
TreeGrafter
UniProt
Ensembl
InterPro
MGI		 PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2316002 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,343,035 		JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:94,261,910...94,272,129
Ensembl chr15:94,266,701...94,272,119 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 PMID:12753071 MGI
GO_Central
TreeGrafter
Ensembl		 PMID:12753071 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1299508 NCBI chr 2:9,328,260...9,353,384
Ensembl chr 2:9,328,269...9,353,340 		JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414
G NIT2 nitrilase family member 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:158,630,997...158,653,164
Ensembl chr13:158,630,913...158,653,147 		JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:106,911,267...106,933,105
Ensembl chr 1:106,911,277...106,933,118 		JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:12,869,347...13,010,897
Ensembl chr 9:12,867,686...13,010,887 		JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:4193185) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:4193185 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:48,500,156...48,506,992
Ensembl chr15:48,499,964...48,507,010 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
MGI		 PMID:4193185 GO_REF:0000107 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,391,116...76,417,301 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G METTL24 methyltransferase like 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:76,243,969...76,367,789
Ensembl chr 1:76,245,825...76,367,780 		JBrowse link
aspartate family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in IEA UniProt GO_REF:0000117
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chr10:17,220,081...17,259,141
Ensembl chr10:17,220,207...17,259,182 		JBrowse link
G ASPA aspartoacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,612,845...49,630,303
Ensembl chr12:49,610,519...49,641,864 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
G DDO D-aspartate oxidase acts_upstream_of_or_within ISO (PMID:16525061) MGI PMID:16525061 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,391,116...76,417,301 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in ISO
ISS		 RGD
UniProt		 PMID:2837211 GO_REF:0000024 RGD:2289377 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISO
ISS		 RGD
UniProt		 PMID:12686151 GO_REF:0000024 RGD:2289396 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G NAT8L N-acetyltransferase 8 like involved_in ISO (PMID:28077719) MGI PMID:28077719 NCBI chr 8:1,063,917...1,072,191
Ensembl chr 8:1,063,824...1,072,189 		JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS1 aspartyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:15,810,497...15,885,706
Ensembl chr15:15,810,618...15,885,706 		JBrowse link
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:116,109,970...116,140,635
Ensembl chr 9:116,109,986...116,140,627 		JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,414...120,712,459 		JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,231...49,565,075 		JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,360,610...97,381,830 		JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24467666) Ensembl
MGI		 PMID:24467666 GO_REF:0000107 NCBI chr 8:55,604,394...55,645,536
Ensembl chr 8:55,604,626...55,645,473 		JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489 		JBrowse link
G UPB1 beta-ureidopropionase 1 ISO RGD PMID:7626590 RGD:1624989 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,231...49,565,075 		JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (PMID:14755340) MGI PMID:14755340 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14755340) RGD
MGI
Ensembl		 PMID:11733007 PMID:14755340 GO_REF:0000107 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:49,381,995...49,398,745
Ensembl chr 6:49,381,967...49,398,743 		JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:85,755,819...86,017,661
Ensembl chr 1:85,755,743...86,017,650 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,354...17,380,880 		JBrowse link
G DBT dihydrolipoamide branched chain transacylase E2 involved_in ISO (PMID:3593587) ComplexPortal PMID:3593587 NCBI chr 4:117,884,657...117,924,006
Ensembl chr 4:117,875,002...117,936,612 		JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583 		JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr18:44,985,410...45,102,171
Ensembl chr18:44,985,425...45,208,347 		JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:94,795,744...94,941,362
Ensembl chr15:94,792,985...94,941,266 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,984...130,910,586 		JBrowse link
G PPM1K protein phosphatase, Mg2+/Mn2+ dependent 1K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:130,748,207...130,772,936
Ensembl chr 8:130,748,259...130,772,931 		JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:93,837,004...93,857,154
Ensembl chr 4:93,837,009...93,857,158 		JBrowse link
G TMEM91 transmembrane protein 91 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:49,366,073...49,372,419
Ensembl chr 6:49,367,733...49,371,294 		JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20237068) InterPro
MGI
Ensembl		 PMID:20237068 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNS1 carnosine synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:20097752), (PMID:24891507) MGI
TreeGrafter
GO_Central
Ensembl
InterPro		 PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:5,097,238...5,105,697
Ensembl chr 2:5,097,243...5,105,696 		JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNMT1 carnosine N-methyltransferase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:228,054,910...228,092,258
Ensembl chr 1:228,054,915...228,092,263 		JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:7053379 GO_REF:0000033 GO_REF:0000118 RGD:10755426 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,492 		JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:9472964 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:4144071 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
citrulline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,579,729...130,617,531 		JBrowse link
G DDAH2 DDAH family member 2, ADMA-independent NOT|involved_in ISO
IEA		 (PMID:21493890), (PMID:37296100) UniProt
TreeGrafter		 PMID:21493890 PMID:37296100 GO_REF:0000118 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,996...23,842,516 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:17213233) MGI PMID:17213233 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024 		JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030387) UniProt
MGI
Ensembl		 PMID:15030387 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,618,737...49,638,054 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367 		JBrowse link
cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12384496) Ensembl
MGI		 PMID:12384496 GO_REF:0000107 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARS1 cysteinyl-tRNA synthetase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:2,119,576...2,163,378
Ensembl chr 2:2,119,592...2,163,343 		JBrowse link
G CARS2 cysteinyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:77,231,865...77,269,936
Ensembl chr11:77,229,971...77,265,272 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IDA (PMID:16751595), (PMID:2572224) UniProt PMID:2572224 PMID:16751595 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
G DDO D-aspartate oxidase involved_in IEA
IBA
ISS
IDA		 (PMID:16751595), (PMID:17234685) UniProt
GO_Central
TreeGrafter		 PMID:16751595 PMID:17234685 GO_REF:0000024 GO_REF:0000033 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,391,116...76,417,301 		JBrowse link
G METTL24 methyltransferase like 24 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:76,243,969...76,367,789
Ensembl chr 1:76,245,825...76,367,780 		JBrowse link
D-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
G DDO D-aspartate oxidase involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,391,116...76,417,301 		JBrowse link
G METTL24 methyltransferase like 24 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:76,243,969...76,367,789
Ensembl chr 1:76,245,825...76,367,780 		JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SGSM2 small G protein signaling modulator 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,881...48,408,039 		JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:48,416,774...48,462,851
Ensembl chr12:48,416,790...48,462,846 		JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in ISO (PMID:21679769) UniProt PMID:21679769 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,881...48,408,039 		JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TH tyrosine hydroxylase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:9520487)
(PMID:7592982), (PMID:7715703)		 RGD
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:19584816 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1580046 RGD:5130972 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:19540876 RGD:9588538 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,970...34,015,474 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 involved_in ISO (MGI:5697738|PMID:26430123) UniProt PMID:26430123 MGI:5697738 NCBI chr 1:226,163,347...226,217,342
Ensembl chr 1:226,161,299...226,217,308 		JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in ISO
IBA
IEA
ISS		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:17712632 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:6480258 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,812 		JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:22108820 GO_REF:0000033 GO_REF:0000118 RGD:401900601 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,647...49,390,926 		JBrowse link
G LOC110261667 glutamate decarboxylase 1-like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:160,629,047...160,858,696 JBrowse link
G SLC1A3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15305132) Ensembl
MGI		 PMID:15305132 GO_REF:0000107 NCBI chr16:21,873,691...21,965,315
Ensembl chr16:21,873,691...21,964,990 		JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:77,009,840...77,076,723
Ensembl chr 5:77,009,862...77,058,427 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IMP
IBA
IEA		 (PMID:11561735) UniProt
GO_Central
TreeGrafter		 PMID:11561735 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,970...34,015,474 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11544478), (PMID:15262267) InterPro
MGI
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:11544478 PMID:15262267 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,098 		JBrowse link
gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,970...34,015,474 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12067239), (PMID:16504488), (PMID:16647690) Ensembl
MGI		 PMID:12067239 PMID:16504488 PMID:16647690 GO_REF:0000107 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,098 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114063) Ensembl
MGI		 PMID:19114063 GO_REF:0000107 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,446...95,598,311 		JBrowse link
G GLS2 glutaminase 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:21,806,405...21,820,001
Ensembl chr 5:21,806,406...21,820,001 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,520 		JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr15:77,895,935...78,021,930
Ensembl chr15:77,895,938...78,098,383 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,812 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,520 		JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:4193185) RGD
MGI
Ensembl		 PMID:4193185 PMID:16489927 GO_REF:0000107 RGD:13504861 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:4193185) RGD
MGI
Ensembl		 PMID:4193185 PMID:16489927 GO_REF:0000107 RGD:13504861 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
MGI		 PMID:4193185 GO_REF:0000107 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
MGI		 PMID:4193185 GO_REF:0000107 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,251,970...68,285,436
Ensembl chr 4:68,250,646...68,285,405 		JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD2 glutamate decarboxylase 2 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:8999827 GO_REF:0000033 GO_REF:0000118 RGD:1625237 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,647...49,390,926 		JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,776...19,792,256 		JBrowse link
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17854388) Ensembl
MGI		 PMID:17854388 GO_REF:0000107 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,098 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28701731) Ensembl
MGI		 PMID:28701731 GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858 		JBrowse link
G DGLUCY D-glutamate cyclase involved_in ISO (MGI:5901965|PMID:28266638) UniProt PMID:28266638 MGI:5901965 NCBI chr 7:112,753,719...112,862,247 JBrowse link
G FPGS folylpolyglutamate synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,765...268,309,398 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:49,618,737...49,638,054 JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:4403443 RGD:2301548 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,717,518...48,873,492
Ensembl chr 7:48,717,851...48,873,455 		JBrowse link
G NAGS N-acetylglutamate synthase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12049647) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:12049647 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:19,170,398...19,173,968
Ensembl chr12:19,169,961...19,174,747 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,589...14,583,177 		JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
InterPro		 PMID:28323 PMID:4403443 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 RGD:2301547 RGD:2301548 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547 		JBrowse link
G LGSN lengsin, lens protein with glutamine synthetase domain NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:82,360,058...82,388,479
Ensembl chr 1:82,360,774...82,387,717 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16641247) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:16641247 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,446...95,598,311 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:21,806,405...21,820,001
Ensembl chr 5:21,806,406...21,820,001 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr 8:55,652,194...55,701,077
Ensembl chr 8:55,654,377...55,701,077 		JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:12522136 RGD:5135508
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,343,035 		JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:94,261,910...94,272,129
Ensembl chr15:94,266,701...94,272,119 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28701731) Ensembl
MGI		 PMID:28701731 GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
UniProt
InterPro		 PMID:2474281 PMID:2803258 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:10755425 RGD:5132588 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,492 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078 		JBrowse link
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 6:170,201,749...170,233,105
Ensembl chr 6:170,201,751...170,233,016 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr  X:13,050,740...13,181,131
Ensembl chr  X:13,049,941...13,174,568 		JBrowse link
G GATD1 glutamine amidotransferase class 1 domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:472,766...484,609
Ensembl chr 2:474,296...480,736 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:73,028,804...73,085,319 		JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:78,285,208...78,328,288
Ensembl chr 2:78,285,203...78,328,285 		JBrowse link
G GGH gamma-glutamyl hydrolase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 4:70,996,730...71,020,513
Ensembl chr 4:70,996,755...71,021,838 		JBrowse link
G GLS glutaminase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,446...95,598,311 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:21,806,405...21,820,001
Ensembl chr 5:21,806,406...21,820,001 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,520 		JBrowse link
G GMPS guanine monophosphate synthase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr13:95,742,342...95,820,903
Ensembl chr13:95,738,659...95,819,759 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17237885) Ensembl
MGI		 PMID:17237885 GO_REF:0000107 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,738,659 		JBrowse link
G NIT2 nitrilase family member 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:158,630,997...158,653,164
Ensembl chr13:158,630,913...158,653,147 		JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO
IEA		 RGD
UniProt		 PMID:3436958 GO_REF:0000043 GO_REF:0000104 RGD:1599004 NCBI chr12:53,458,401...53,477,254 JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114063) Ensembl
MGI		 PMID:19114063 GO_REF:0000107 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,290,288...40,303,887
Ensembl chr14:40,290,288...40,303,879 		JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in ISO PMID:10660562 UniProt PMID:10660562 RGD:68922 NCBI chr 5:77,009,840...77,076,723
Ensembl chr 5:77,009,862...77,058,427 		JBrowse link
G TTPA alpha tocopherol transfer protein involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 4:70,960,580...70,980,883
Ensembl chr 4:70,961,465...70,980,876 		JBrowse link
G UCP2 uncoupling protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:8,358,559...8,364,552
Ensembl chr 9:8,358,025...8,365,547 		JBrowse link
glutaminyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:147,480,132...147,554,197
Ensembl chr 2:147,477,370...147,554,047 		JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:31,715,686...31,723,200
Ensembl chr13:31,715,689...31,723,197 		JBrowse link
glutaminyl-tRNAGln biosynthesis via transamidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATB glutamyl-tRNA amidotransferase subunit B involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr 8:77,222,457...77,323,720
Ensembl chr 8:77,169,566...77,323,859 		JBrowse link
G GATC glutamyl-tRNA amidotransferase subunit C involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr14:40,413,864...40,425,306
Ensembl chr14:40,414,017...40,423,628 		JBrowse link
G QRSL1 glutaminyl-tRNA amidotransferase subunit QRSL1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
UniProt		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:72,815,601...72,846,871
Ensembl chr 1:72,815,613...72,844,843 		JBrowse link
glutamyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:22,654,351...22,684,246
Ensembl chr 3:22,657,766...22,684,241 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr10:9,579,301...9,648,416
Ensembl chr10:9,579,304...9,648,414 		JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
G THA1 threonine aldolase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:3,728,742...3,734,209 JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO
IBA
IEA		 in the presence of tetrahydrofolate RGD
GO_Central
TreeGrafter
InterPro		 PMID:3110140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 RGD:2300383 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA
IBA		 in the presence of tetrahydrofolate RGD
TreeGrafter
GO_Central
InterPro		 PMID:3110140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 RGD:2300383 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:12383475 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1599457 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736 		JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,659...20,617,011 		JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr13:31,995,600...32,002,514
Ensembl chr13:31,995,595...32,002,470 		JBrowse link
G GLDC glycine decarboxylase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,059 		JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,995,600...32,002,514
Ensembl chr13:31,995,595...32,002,470 		JBrowse link
G GCSH glycine cleavage system protein H involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
InterPro
UniProt		 PMID:6402507 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 RGD:1598699 NCBI chr 6:7,171,186...7,184,732
Ensembl chr 6:7,171,192...7,184,729 		JBrowse link
G GLDC glycine decarboxylase involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:6778858 GO_REF:0000033 GO_REF:0000118 RGD:1642728 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,059 		JBrowse link
glycine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:243,065,668...243,084,816
Ensembl chr 1:243,065,795...243,084,287 		JBrowse link
G FPGS folylpolyglutamate synthase involved_in ISO (PMID:10964921) UniProt PMID:10964921 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,765...268,309,398 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:4078017 RGD:2301990 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891 		JBrowse link
G GNMT glycine N-methyltransferase involved_in ISO PMID:10756111 RGD
CAFA		 PMID:10756111 PMID:18501206 RGD:12793006 RGD:7242952 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
G LOC100517803 glycine N-phenylacetyltransferase involved_in IEA TreeGrafter GO_REF:0000118
G LOC100518109 glycine N-acyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:12,365,082...12,384,741
Ensembl chr 2:12,365,195...12,395,232 		JBrowse link
G LOC100518644 glycine N-acyltransferase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:12,404,416...12,422,192 JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30988181) Ensembl
MGI		 PMID:30988181 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114063) Ensembl
MGI		 PMID:19114063 GO_REF:0000107 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15671219 GO_REF:0000107 RGD:1359815 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:10457370 PMID:15671219 GO_REF:0000107 RGD:1359815 RGD:2300380 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GARS1 glycyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19470612) InterPro
MGI
Ensembl		 PMID:19470612 GO_REF:0000002 GO_REF:0000107 NCBI chr18:42,311,711...42,352,201
Ensembl chr18:42,311,576...42,352,162 		JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,542...87,547,455 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,713 		JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,542...87,547,455 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,713 		JBrowse link
histidyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HARS1 histidyl-tRNA synthetase 1 involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:142,387,563...142,401,232
Ensembl chr 2:142,385,872...142,401,208 		JBrowse link
G HARS2 histidyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:142,401,279...142,410,253
Ensembl chr 2:142,401,328...142,409,619 		JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLMH bleomycin hydrolase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:46,342,502...46,393,642
Ensembl chr12:46,342,503...46,393,484 		JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10953023), (PMID:10993757), (PMID:15131763), (PMID:15555590), (PMID:15622513), (PMID:15916860), (PMID:16226235), (PMID:18541157), (PMID:7878023) Ensembl
MGI		 PMID:7878023 PMID:10953023 PMID:10993757 PMID:15131763 PMID:15555590 More... GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078 		JBrowse link
G DPEP1 dipeptidase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:361,187...385,757
Ensembl chr 6:361,197...376,616 		JBrowse link
G MMUT methylmalonyl-CoA mutase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,597,313...43,624,603
Ensembl chr 7:43,597,246...43,624,671 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in ISO
IEA		 RGD
Ensembl		 PMID:18726220 GO_REF:0000107 RGD:2317121 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:11730351 PMID:21121936 GO_REF:0000033 GO_REF:0000118 RGD:1601423 RGD:7207080 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G NOX4 NADPH oxidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,622,105...22,776,691
Ensembl chr 9:22,624,212...22,776,534 		JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:86,402,673...86,513,167
Ensembl chr13:86,401,244...86,513,105 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,911,787...8,919,525
Ensembl chr 3:8,911,791...8,919,516 		JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ILVBL ilvB acetolactate synthase like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:62,435,368...62,447,030
Ensembl chr 2:62,435,155...62,451,371 		JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,933...38,513,878 		JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155 		JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:132,563,002...132,607,574
Ensembl chr14:132,563,309...132,626,841 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17767905) RGD
MGI
Ensembl		 PMID:11733007 PMID:17767905 GO_REF:0000107 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,354...17,380,880 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,548...46,220,883 		JBrowse link
isoleucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14755340) Ensembl
MGI		 PMID:14755340 GO_REF:0000107 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
isoleucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IARS1 isoleucyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:8052601) MGI
GO_Central
TreeGrafter
Ensembl
InterPro		 PMID:8052601 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:41,945,846...42,022,610
Ensembl chr 3:41,945,770...42,022,760 		JBrowse link
G IARS2 isoleucyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr10:9,685,641...9,739,816
Ensembl chr10:9,685,678...9,737,159 		JBrowse link
kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,776...19,792,256 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,434,769...12,490,409 		JBrowse link
G KYAT1 kynurenine aminotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:269,172,628...269,209,553
Ensembl chr 1:269,172,628...269,209,478 		JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,759 		JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736 		JBrowse link
G GPT glutamic--pyruvic transaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:297,747...302,498
Ensembl chr 4:297,748...320,056 		JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:37,625,428...37,669,695
Ensembl chr 6:37,625,436...37,669,663 		JBrowse link
G PPP1R16A protein phosphatase 1 regulatory subunit 16A involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:302,621...320,048
Ensembl chr 4:297,748...320,056 		JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,659...20,617,011 		JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,625,428...37,669,695
Ensembl chr 6:37,625,436...37,669,663 		JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,343,035 		JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368 		JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736 		JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CDO1 cysteine dioxygenase type 1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:16611641 GO_REF:0000033 GO_REF:0000118 RGD:2301357 NCBI chr 2:119,927,768...119,940,690
Ensembl chr 2:119,927,772...119,940,665 		JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,288...18,410,646 		JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,288...18,410,646 		JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYAT3 kynurenine aminotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,759 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000041 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891 		JBrowse link
L-kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA GOC GO_REF:0000108 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,776...19,792,256 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:23690293 RGD:13513904 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,434,769...12,490,409 		JBrowse link
G KYAT1 kynurenine aminotransferase 1 involved_in ISO
IEA		 RGD
GOC		 PMID:7796908 GO_REF:0000108 RGD:9685040 NCBI chr 1:269,172,628...269,209,553
Ensembl chr 1:269,172,628...269,209,478 		JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:11733007 GO_REF:0000033 GO_REF:0000118 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD9 acyl-CoA dehydrogenase family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:71,374,926...71,422,431
Ensembl chr13:71,374,944...71,427,126 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,506...112,969,577 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,354...17,380,880 		JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:81,611,516...81,630,454
Ensembl chr 6:81,611,422...81,630,429 		JBrowse link
G HMGCLL1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:25,596,721...25,784,238
Ensembl chr 7:25,596,740...25,773,273 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:130,916,956...130,930,172
Ensembl chr 1:130,916,146...130,930,078 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,984...130,910,586 		JBrowse link
G MCCC2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr16:47,917,308...47,996,540
Ensembl chr16:47,917,291...47,996,534 		JBrowse link
L-leucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17767905)
(PMID:14755340)		 Ensembl
MGI		 PMID:14755340 PMID:17767905 GO_REF:0000107 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
G DAO D-amino acid oxidase acts_upstream_of_or_within ISO (PMID:15026304) MGI PMID:15026304 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567240) Ensembl
MGI		 PMID:10567240 GO_REF:0000107 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,754...25,039,195 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515508 peroxisomal sarcosine oxidase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:45,306,327...45,319,938
Ensembl chr12:45,257,188...45,322,767 		JBrowse link
G PIPOX pipecolic acid and sarcosine oxidase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:45,256,806...45,270,755
Ensembl chr12:45,257,188...45,322,767 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,754...25,039,195 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,124...98,111,572 		JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:87,866,631...87,882,623
Ensembl chr 2:87,866,621...87,882,716 		JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:131,295,257...131,303,663
Ensembl chr 3:131,295,257...131,304,309 		JBrowse link
G APIP APAF1 interacting protein involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:26,095,020...26,115,462
Ensembl chr 2:26,095,038...26,115,464 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:135,775,743...135,802,404
Ensembl chr 8:135,775,745...135,802,388 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 2:65,348,609...65,354,892
Ensembl chr 2:65,348,006...65,355,118 		JBrowse link
G MTAP methylthioadenosine phosphorylase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:200,882,954...200,934,389
Ensembl chr 1:200,882,956...200,934,445 		JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930 		JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:26,095,020...26,115,462
Ensembl chr 2:26,095,038...26,115,464 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 8:135,775,743...135,802,404
Ensembl chr 8:135,775,745...135,802,388 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:65,348,609...65,354,892
Ensembl chr 2:65,348,006...65,355,118 		JBrowse link
L-phenylalanine biosynthetic process from chorismate via phenylpyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,902...49,087,783 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 7:100,392,217...100,404,025
Ensembl chr 7:100,392,271...100,408,420 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr13:139,660,315...139,710,402
Ensembl chr13:139,660,343...139,710,404 		JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr14:30,845,608...30,857,658
Ensembl chr14:30,845,613...30,857,667 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,406...54,916,081 		JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,385,435...81,463,451 		JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:4155291 GO_REF:0000033 GO_REF:0000118 RGD:5128604 NCBI chr 8:12,529,500...12,549,471
Ensembl chr 8:12,529,512...12,549,603 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,589...14,583,177 		JBrowse link
L-phenylalanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase ISO RGD PMID:16953590 RGD:1601531 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,385,435...81,463,451 		JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in ISO PMID:1465414 CAFA PMID:1465414 RGD:12792994 NCBI chr14:73,769,339...73,807,278
Ensembl chr14:73,800,765...73,807,281 		JBrowse link
G SPR sepiapterin reductase acts_upstream_of_or_within ISO (PMID:16532389) MGI PMID:16532389 NCBI chr 3:69,889,448...69,894,747
Ensembl chr 3:69,889,452...69,894,680 		JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215 		JBrowse link
G NOXRED1 NADP dependent oxidoreductase domain containing 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:100,458,164...100,482,053
Ensembl chr 7:100,464,454...100,478,767 		JBrowse link
G OAT ornithine aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:133,808,193...133,830,517 JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr12:1,060,028...1,064,808
Ensembl chr12:1,060,570...1,064,805 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr10:13,841,755...13,845,900
Ensembl chr10:13,838,085...13,845,894 		JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:959,709...964,195
Ensembl chr 4:959,710...964,192 		JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHGDH phosphoglycerate dehydrogenase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:231,142,673...231,172,364
Ensembl chr 1:231,142,625...231,172,360 		JBrowse link
G PSPH phosphoserine phosphatase involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:16,877,904...16,903,062
Ensembl chr 3:16,877,923...16,907,952 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:10457370 RGD:2300380 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G SDS serine dehydratase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,933...38,513,878 		JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
L-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736 		JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114063) Ensembl
MGI		 PMID:19114063 GO_REF:0000107 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:231,142,673...231,172,364
Ensembl chr 1:231,142,625...231,172,360 		JBrowse link
G PSPH phosphoserine phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:16,877,904...16,903,062
Ensembl chr 3:16,877,923...16,907,952 		JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,881...48,408,039 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
L-threonine catabolic process to glycine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TDH L-threonine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:14,577,009...14,597,695 JBrowse link
leucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:147,480,132...147,554,197
Ensembl chr 2:147,477,370...147,554,047 		JBrowse link
G LARS2 leucyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:28,524,778...28,692,327
Ensembl chr13:28,524,796...28,692,327 		JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:35,903,902...35,948,573
Ensembl chr 9:35,839,917...35,948,575 		JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,754...25,039,195 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,754...25,039,195 		JBrowse link
lysine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,754...25,039,195 		JBrowse link
lysyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KARS1 lysyl-tRNA synthetase 1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
InterPro
Ensembl		 PMID:7082655 PMID:7372681 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2303393 RGD:2303394 NCBI chr 6:12,057,475...12,073,749
Ensembl chr 6:12,056,571...12,073,748 		JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMACR alpha-methylacyl-CoA racemase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:20,005,741...20,023,339
Ensembl chr16:19,956,366...20,023,289 		JBrowse link
G DCT dopachrome tautomerase involved_in ISS
IBA
IEA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr11:63,584,865...63,647,486
Ensembl chr11:63,584,869...63,678,344 		JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:56,657,648...56,869,920
Ensembl chr15:56,657,616...56,869,918 		JBrowse link
G SLC45A2 solute carrier family 45 member 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:19,958,315...20,002,198
Ensembl chr16:19,956,366...20,023,289 		JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:131,295,257...131,303,663
Ensembl chr 3:131,295,257...131,304,309 		JBrowse link
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:26,095,020...26,115,462
Ensembl chr 2:26,095,038...26,115,464 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15217352) RGD
MGI
InterPro		 PMID:15217352 PMID:15845641 GO_REF:0000002 RGD:1359026 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:87,866,631...87,882,623
Ensembl chr 2:87,866,621...87,882,716 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:135,775,743...135,802,404
Ensembl chr 8:135,775,745...135,802,388 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:65,348,609...65,354,892
Ensembl chr 2:65,348,006...65,355,118 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15217352) TreeGrafter
MGI
GO_Central		 PMID:15217352 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:11158293) RGD
TreeGrafter
MGI
GO_Central
Ensembl
UniProt
InterPro		 PMID:11158293 PMID:11730351 PMID:15845641 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:1359026 RGD:1601423 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:82,109,405...82,126,487
Ensembl chr14:82,107,390...82,127,049 		JBrowse link
methionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:131,295,257...131,303,663
Ensembl chr 3:131,295,257...131,304,309 		JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17937387) Ensembl
MGI		 PMID:17937387 GO_REF:0000107 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:21121936 RGD:7207080 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930 		JBrowse link
methionyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARS1 methionyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:22,752,405...22,785,509
Ensembl chr 5:22,752,374...22,785,501 		JBrowse link
G MARS2 methionyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:101,508,668...101,524,076
Ensembl chr15:101,510,638...101,512,419 		JBrowse link
mitochondrial alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:39,301,020...39,314,296
Ensembl chr 7:39,301,009...39,313,860 		JBrowse link
mitochondrial asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:116,109,970...116,140,635
Ensembl chr 9:116,109,986...116,140,627 		JBrowse link
mitochondrial glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GARS1 glycyl-tRNA synthetase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:42,311,711...42,352,201
Ensembl chr18:42,311,576...42,352,162 		JBrowse link
mitochondrial seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARS1 seryl-tRNA synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:110,857,067...110,874,712
Ensembl chr 4:110,857,089...110,874,815 		JBrowse link
G SARS2 seryl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:47,717,363...47,728,394
Ensembl chr 6:47,716,679...47,728,310 		JBrowse link
mitochondrial tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WARS2 tryptophanyl tRNA synthetase 2, mitochondrial involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:101,787,585...101,881,231
Ensembl chr 4:101,787,583...101,883,070 		JBrowse link
mitochondrial tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,561,563...41,584,534
Ensembl chr 5:41,561,626...41,584,818 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in ISO PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,659...20,617,011 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663 		JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663 		JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATCAY ATCAY kinesin light chain interacting caytaxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,800,048...74,838,923
Ensembl chr 2:74,800,048...74,838,671 		JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAZ1 ornithine decarboxylase antizyme 1 ISO RGD PMID:8166639 RGD:401851045 NCBI chr 2:76,293,142...76,296,626
Ensembl chr 2:76,293,150...76,296,620 		JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215 		JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTC ornithine transcarbamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
ornithine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZIN2 antizyme inhibitor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16916800) Ensembl
MGI		 PMID:16916800 GO_REF:0000107 NCBI chr 6:89,346,860...89,385,323
Ensembl chr 6:89,345,862...89,385,319 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,500 		JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA		 RGD
GOC		 PMID:4062872 GO_REF:0000108 RGD:2300098 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
G SLC25A2 solute carrier family 25 member 2 involved_in ISO (PMID:12948741) UniProt PMID:12948741 NCBI chr 2:142,943,565...142,947,313
Ensembl chr 2:142,944,078...142,944,980 		JBrowse link
phenylalanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:3,193,433...3,557,413
Ensembl chr 7:3,262,396...3,557,407 		JBrowse link
G FARSA phenylalanyl-tRNA synthetase subunit alpha involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:66,105,393...66,114,867
Ensembl chr 2:66,105,429...66,118,191 		JBrowse link
G FARSB phenylalanyl-tRNA synthetase subunit beta involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 GO_REF:0000118 NCBI chr15:124,472,236...124,555,042 JBrowse link
G LOC110261142 phenylalanine--tRNA ligase beta subunit-like involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 GO_REF:0000118 NCBI chr 6:91,357,619...91,363,097 JBrowse link
G LRRC47 leucine rich repeat containing 47 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:65,261,990...65,271,745
Ensembl chr 6:65,260,793...65,271,729 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,294...83,684,604 		JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,294...83,684,604 		JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase ISO RGD PMID:15779086 RGD:2289784 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,738...51,403,998 		JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,516 		JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215 		JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr12:1,060,028...1,064,808
Ensembl chr12:1,060,570...1,064,805 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:13,841,755...13,845,900
Ensembl chr10:13,838,085...13,845,894 		JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:959,709...964,195
Ensembl chr 4:959,710...964,192 		JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:45,213,712...45,240,437 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 Ensembl chr 6:45,226,332...45,240,442 JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,374,002...77,404,036 		JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:45,213,712...45,240,437 JBrowse link
proline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,374,002...77,404,036 		JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IEA UniProt GO_REF:0000043 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:45,213,712...45,240,437 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA UniProt GO_REF:0000043 Ensembl chr 6:45,226,332...45,240,442 JBrowse link
prolyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:9,579,301...9,648,416
Ensembl chr10:9,579,304...9,648,414 		JBrowse link
G PARS2 prolyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:157,588,985...157,595,175
Ensembl chr 6:157,589,024...157,595,171 		JBrowse link
putrescine biosynthetic process from arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,231...49,565,075 		JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:74,773,359...74,784,486
Ensembl chr 6:74,773,324...74,784,457 		JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZIN1 antizyme inhibitor 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:34,221,368...34,257,261
Ensembl chr 4:34,234,679...34,257,134 		JBrowse link
G AZIN2 antizyme inhibitor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:89,346,860...89,385,323
Ensembl chr 6:89,345,862...89,385,319 		JBrowse link
G LOC100520618 ornithine decarboxylase-like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:88,047,044...88,061,905 JBrowse link
G ODC1 ornithine decarboxylase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:126,087,013...126,095,644
Ensembl chr 3:126,087,242...126,096,051 		JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,433,564...18,450,296
Ensembl chr 3:18,433,836...18,450,290 		JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase involved_in ISS UniProt GO_REF:0000024 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,824 		JBrowse link
G SLC7A7 solute carrier family 7 member 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17376816) Ensembl
MGI
TreeGrafter		 PMID:17376816 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:76,195,774...76,235,406
Ensembl chr 7:76,198,256...76,235,402 		JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INS insulin involved_in ISO (PMID:3553851) BHF-UCL PMID:3553851 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841 		JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17200146) Ensembl
MGI		 PMID:17200146 GO_REF:0000107 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,608,174...88,687,250 		JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO RGD PMID:19858196 RGD:6484536 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21490221), (PMID:25429150)
(PMID:24548853)		 Ensembl
MGI		 PMID:21490221 PMID:24548853 PMID:25429150 GO_REF:0000107 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,608,174...88,687,250 		JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,290,288...40,303,887
Ensembl chr14:40,290,288...40,303,879 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase acts_upstream_of_or_within ISO (PMID:12023972) RGD
MGI		 PMID:11741948 PMID:12023972 RGD:730275 NCBI chr17:37,726,084...37,744,378
Ensembl chr17:37,726,084...37,744,461 		JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAMT guanidinoacetate N-methyltransferase ISO RGD PMID:15533043 RGD:1359081 NCBI chr 2:77,076,566...77,079,751
Ensembl chr 2:77,076,566...77,079,759 		JBrowse link
G GNMT glycine N-methyltransferase involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:15347642 GO_REF:0000033 GO_REF:0000118 RGD:1359070 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
G ICMT isoprenylcysteine carboxyl methyltransferase ISO RGD PMID:9192075 RGD:2289655 NCBI chr 6:67,116,943...67,125,908
Ensembl chr 6:67,116,946...67,123,810 		JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:8263531 RGD:729481 NCBI chr 1:16,202,859...16,249,879
Ensembl chr 1:16,198,223...16,249,531 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chr12:60,880,367...60,919,279 JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARDH sarcosine dehydrogenase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:273,230,357...273,295,170
Ensembl chr 1:273,230,375...273,294,621 		JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNMT glycine N-methyltransferase involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:18501206 GO_REF:0000033 GO_REF:0000118 RGD:7242952 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEPHS1 selenophosphate synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:48,359,379...48,385,787
Ensembl chr10:48,362,463...48,386,431 		JBrowse link
G SEPHS2 selenophosphate synthetase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17346238) TreeGrafter
MGI
GO_Central		 PMID:17346238 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:17,886,965...17,889,128 JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCLY selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr15:137,637,076...137,674,726
Ensembl chr15:137,637,128...137,674,735 		JBrowse link
selenocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TXNRD1 thioredoxin reductase 1 ISO RGD PMID:10512699 RGD:634379 NCBI chr 5:80,170,334...80,213,889
Ensembl chr 5:80,172,260...80,236,219 		JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:57,800,976...57,821,296
Ensembl chr 3:57,799,026...57,823,440 		JBrowse link
serine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30988181) Ensembl
MGI		 PMID:30988181 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,881...48,408,039 		JBrowse link
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 ISO RGD PMID:23098818 RGD:11353778 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,642 		JBrowse link
seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARS1 seryl-tRNA synthetase 1 involved_in IEA
IBA		 Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:110,857,067...110,874,712
Ensembl chr 4:110,857,089...110,874,815 		JBrowse link
G SARS2 seryl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:47,717,363...47,728,394
Ensembl chr 6:47,716,679...47,728,310 		JBrowse link
threonine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:17034760) TreeGrafter
MGI		 PMID:17034760 GO_REF:0000118 NCBI chr 3:57,800,976...57,821,296
Ensembl chr 3:57,799,026...57,823,440 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:10,027,133...10,038,494
Ensembl chr 5:10,027,044...10,038,433 		JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,933...38,513,878 		JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155 		JBrowse link
G TDH L-threonine dehydrogenase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA
IBA		 (PMID:21896756) UniProt
MGI
TreeGrafter
GO_Central		 PMID:21896756 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr14:14,577,009...14,597,695 JBrowse link
G THA1 threonine aldolase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:3,728,742...3,734,209 JBrowse link
threonine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114063) Ensembl
MGI		 PMID:19114063 GO_REF:0000107 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
threonyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARS1 threonyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:19,455,294...19,486,735
Ensembl chr16:19,455,092...19,486,732 		JBrowse link
G TARS2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:98,622,235...98,635,318
Ensembl chr 4:98,622,494...98,635,271 		JBrowse link
G TARS3 threonyl-tRNA synthetase 3 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:145,302,336...145,357,762
Ensembl chr 1:145,302,278...145,357,778 		JBrowse link
transsulfuration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase ISO RGD PMID:16636197 RGD:1600624 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367 		JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO RGD PMID:17130129 RGD:9685559 NCBI chr 5:10,739,179...10,749,826
Ensembl chr 5:10,739,197...10,749,731 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:116,109,970...116,140,635
Ensembl chr 9:116,109,986...116,140,627 		JBrowse link
G FARSA phenylalanyl-tRNA synthetase subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:66,105,393...66,114,867
Ensembl chr 2:66,105,429...66,118,191 		JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:41,561,563...41,584,534
Ensembl chr 5:41,561,626...41,584,818 		JBrowse link
tRNA aminoacylation for mitochondrial protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,654,351...22,684,246
Ensembl chr 3:22,657,766...22,684,241 		JBrowse link
tRNA aminoacylation for protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:116,109,970...116,140,635
Ensembl chr 9:116,109,986...116,140,627 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:9,579,301...9,648,416
Ensembl chr10:9,579,304...9,648,414 		JBrowse link
G GARS1 glycyl-tRNA synthetase 1 involved_in IEA Ensembl
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr18:42,311,711...42,352,201
Ensembl chr18:42,311,576...42,352,162 		JBrowse link
G HARS1 histidyl-tRNA synthetase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:142,387,563...142,401,232
Ensembl chr 2:142,385,872...142,401,208 		JBrowse link
G KCNMB3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:117,283,505...117,370,306
Ensembl chr13:117,283,631...117,309,863 		JBrowse link
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:106,911,267...106,933,105
Ensembl chr 1:106,911,277...106,933,118 		JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:12,869,347...13,010,897
Ensembl chr 9:12,867,686...13,010,887 		JBrowse link
G PARS2 prolyl-tRNA synthetase 2, mitochondrial involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:157,588,985...157,595,175
Ensembl chr 6:157,589,024...157,595,171 		JBrowse link
G TARS1 threonyl-tRNA synthetase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:19,455,294...19,486,735
Ensembl chr16:19,455,092...19,486,732 		JBrowse link
G TARS2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:98,622,235...98,635,318
Ensembl chr 4:98,622,494...98,635,271 		JBrowse link
G TARS3 threonyl-tRNA synthetase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:145,302,336...145,357,762
Ensembl chr 1:145,302,278...145,357,778 		JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr15:17,121,950...17,164,005
Ensembl chr15:17,106,724...17,163,899 		JBrowse link
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr12:3,759,688...3,785,829
Ensembl chr12:3,759,708...3,785,835 		JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 3:97,580,756...97,595,033
Ensembl chr 3:97,580,851...97,595,021 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr17:9,245,283...9,260,140
Ensembl chr17:9,245,196...9,260,473 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr17:9,277,039...9,344,405
Ensembl chr17:9,277,069...9,343,749 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,406...54,916,081 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,434,769...12,490,409 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 GO_REF:0000117 NCBI chr 8:44,708,722...44,725,954
Ensembl chr 8:44,708,746...44,740,962 		JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7236232 GO_REF:0000118 RGD:2303721 NCBI chr 8:44,708,722...44,725,954
Ensembl chr 8:44,708,746...44,740,962 		JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,406...54,916,081 		JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15866519) UniProt
MGI
GO_Central
InterPro		 PMID:15866519 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 NCBI chr12:3,759,688...3,785,829
Ensembl chr12:3,759,708...3,785,835 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:11751753), (PMID:2419335) RGD
UniProt
MGI
TreeGrafter
GO_Central
Ensembl
InterPro		 PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:2290190 RGD:2290543 NCBI chr17:9,245,283...9,260,140
Ensembl chr17:9,245,196...9,260,473 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17499941)
(PMID:17671174)		 InterPro
UniProt
MGI
GO_Central
TreeGrafter
Ensembl		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr17:9,277,039...9,344,405
Ensembl chr17:9,277,069...9,343,749 		JBrowse link
G KYNU kynureninase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr 8:44,708,722...44,725,954
Ensembl chr 8:44,708,746...44,740,962 		JBrowse link
tryptophan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:4147174) MGI PMID:4147174 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G GCDH glutaryl-CoA dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:66,131,154...66,138,963
Ensembl chr 2:66,130,625...66,138,868 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:3400092 PMID:3899109 PMID:10719243 RGD:2290190 RGD:2290313 RGD:2291804 NCBI chr 8:44,708,722...44,725,954
Ensembl chr 8:44,708,746...44,740,962 		JBrowse link
tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WARS1 tryptophanyl-tRNA synthetase 1 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:121,212,981...121,238,144
Ensembl chr 7:121,212,981...121,238,113 		JBrowse link
G WARS2 tryptophanyl tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:101,787,585...101,881,231
Ensembl chr 4:101,787,583...101,883,070 		JBrowse link
tyrosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:16953590 GO_REF:0000033 GO_REF:0000118 RGD:1601531 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,385,435...81,463,451 		JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:58807|PMID:2308957) RGD
GOC
GOC		 PMID:2308957 PMID:10839989 GO_REF:0000108 MGI:58807 RGD:1601535 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,385,435...81,463,451 		JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr14:73,769,339...73,807,278
Ensembl chr14:73,800,765...73,807,281 		JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,902...49,087,783 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:100,392,217...100,404,025
Ensembl chr 7:100,392,271...100,408,420 		JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA
ISS		 (PMID:31537781) MGI
TreeGrafter
GO_Central
UniProt		 PMID:31537781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr14:30,845,608...30,857,658
Ensembl chr14:30,845,613...30,857,667 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,406...54,916,081 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,589...14,583,177 		JBrowse link
tyrosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:4147174) MGI PMID:4147174 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr13:139,660,315...139,710,402
Ensembl chr13:139,660,343...139,710,404 		JBrowse link
G IYD iodotyrosine deiodinase involved_in IDA
IEA
IBA		 (PMID:25395621) UniProt
TreeGrafter
GO_Central
Ensembl		 PMID:25395621 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:15,756,536...15,779,380
Ensembl chr 1:15,756,550...15,779,164 		JBrowse link
G THAP4 THAP domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:140,190,198...140,223,454
Ensembl chr15:140,185,682...140,223,477 		JBrowse link
G TTC36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (PMID:31537781) MGI PMID:31537781 NCBI chr 9:45,829,014...45,838,978
Ensembl chr 9:45,829,191...45,838,979 		JBrowse link
tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YARS1 tyrosyl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:89,088,122...89,118,837
Ensembl chr 6:89,088,544...89,119,592 		JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:41,561,563...41,584,534
Ensembl chr 5:41,561,626...41,584,818 		JBrowse link
valine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:62,435,368...62,447,030
Ensembl chr 2:62,435,155...62,451,371 		JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:2768248 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,360,610...97,381,830 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,354...17,380,880 		JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr18:44,985,410...45,102,171
Ensembl chr18:44,985,425...45,208,347 		JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr15:94,795,744...94,941,362
Ensembl chr15:94,792,985...94,941,266 		JBrowse link
valine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISO PMID:2768248 UniProt PMID:2768248 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,360,610...97,381,830 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14755340)
(PMID:17767905)		 Ensembl
MGI		 PMID:14755340 PMID:17767905 GO_REF:0000107 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,684...54,142,790 		JBrowse link
valyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VARS1 valyl-tRNA synthetase 1 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:23,886,132...23,899,265
Ensembl chr 7:23,886,138...23,899,738 		JBrowse link
G VARS2 valyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:23,404,400...23,416,442
Ensembl chr 7:23,404,824...23,416,439 		JBrowse link
Term paths to the root
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  biological_process 17799
    metabolic process 10358
      organic substance metabolic process 9930
        amino acid metabolic process 294
          alpha-amino acid metabolic process + 212
          amino acid activation + 47
          amino acid biosynthetic process + 75
          amino acid catabolic process + 103
          aromatic amino acid metabolic process + 34
          branched-chain amino acid metabolic process + 27
          carnosine metabolic process + 2
          chiral amino acid racemization + 0
          diaminopimelate metabolic process + 0
          negative regulation of cellular amino acid metabolic process + 3
          nicotianamine metabolic process + 0
          non-proteinogenic amino acid metabolic process + 72
          positive regulation of amino acid metabolic process + 3
          proteinogenic amino acid metabolic process + 165
          regulation of cellular amino acid metabolic process + 13
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