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ONTOLOGY REPORT - ANNOTATIONS


Term:amino acid metabolic process
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Accession:GO:0006520 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
Synonyms:exact_synonym: cellular amino acid metabolic process;   cellular amino acid metabolism
 related_synonym: amino acid and derivative metabolism;   cellular amino acid and derivative metabolic process
 alt_id: GO:0006519



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amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Accs 1-aminocyclopropane-1-carboxylate synthase (inactive) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:93,663,812...93,680,343
Ensembl chr 2:93,663,812...93,680,288
JBrowse link
G Accsl 1-aminocyclopropane-1-carboxylate synthase (inactive)-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:93,685,705...93,760,827
Ensembl chr 2:93,685,706...93,760,827
JBrowse link
G Acy1 aminoacylase 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 9:106,310,180...106,315,594
Ensembl chr 9:106,310,180...106,315,518
JBrowse link
G Asl argininosuccinate lyase acts_upstream_of_or_within IMP (PMID:12559843) MGI PMID:12559843 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Asns asparagine synthetase ISO RGD PMID:7818476 RGD:1298553 NCBI chr 6:7,675,169...7,693,209
Ensembl chr 6:7,675,169...7,693,254
JBrowse link
G Aspg asparaginase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:112,073,117...112,094,007
Ensembl chr12:112,073,113...112,093,993
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin acts_upstream_of_or_within IMP (PMID:28701731) MGI PMID:28701731 NCBI chr 2:122,580,425...122,591,407
Ensembl chr 2:122,580,423...122,591,395
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:31,211,964...31,235,823
Ensembl chr 5:31,212,124...31,235,823
JBrowse link
G Ddc dopa decarboxylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:11,764,101...11,848,144
Ensembl chr11:11,764,101...11,848,144
JBrowse link
G Dio1 deiodinase, iodothyronine, type I involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:107,148,662...107,164,365
Ensembl chr 4:107,148,662...107,164,366
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911) UniProt PMID:14754911 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:75,425,161...75,453,034
Ensembl chr10:75,425,174...75,453,034
JBrowse link
G Gldc glycine decarboxylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr19:30,075,847...30,152,829
Ensembl chr19:30,075,847...30,152,829
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1, soluble involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1-like 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:27,687,487...27,713,872
Ensembl chr 8:27,687,487...27,713,856
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial involved_in ISO RGD
MGI
PMID:14522984 GO_REF:0000096 MGI:4417868 RGD:1582383 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
G Hdc histidine decarboxylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:126,435,579...126,465,942
Ensembl chr 2:126,435,587...126,461,219
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase acts_upstream_of_or_within IMP (PMID:8188247) MGI PMID:8188247 NCBI chr16:37,400,104...37,452,388
Ensembl chr16:37,400,515...37,452,382
JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in IDA (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 3:142,406,780...142,450,672
Ensembl chr 3:142,406,812...142,452,631
JBrowse link
G Otc ornithine transcarbamylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in IDA
IBA
ISO
(MGI:5796058|PMID:27374330) UniProt
GO_Central
MGI
PMID:27374330 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5796058 NCBI chr 1:131,725,122...131,749,210
Ensembl chr 1:131,725,119...131,749,211
JBrowse link
G Sds serine dehydratase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:120,614,612...120,621,997
Ensembl chr 5:120,614,591...120,621,997
JBrowse link
G Slc16a2 solute carrier family 16 (monocarboxylic acid transporters), member 2 acts_upstream_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:102,741,020...102,865,594
Ensembl chr  X:102,741,020...102,865,589
JBrowse link
G Srr serine racemase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:74,794,853...74,818,427
Ensembl chr11:74,797,185...74,816,774
JBrowse link
G Tat tyrosine aminotransferase involved_in ISO RGD
MGI
PMID:12717026 GO_REF:0000096 MGI:4417868 RGD:1582407 NCBI chr 8:110,712,710...110,726,436
Ensembl chr 8:110,717,069...110,726,435
JBrowse link
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine methyltransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:93,753,399...93,774,266
Ensembl chr13:93,753,183...93,774,469
JBrowse link
G Bhmt1b betaine--homocysteine S-methyltransferase 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:87,774,411...87,776,278
Ensembl chr18:87,774,410...87,776,275
JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:84,138,777...84,157,589
Ensembl chr17:84,138,585...84,155,392
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:25,074,148...25,086,987
Ensembl chr 8:25,074,152...25,087,025
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:25,021,908...25,066,430
Ensembl chr 8:25,021,908...25,066,349
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:42,033,998...42,060,128
Ensembl chr19:42,034,049...42,059,392
JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IDA
IBA
IMP
ISO
(MGI:5905209|PMID:27622773)
(PMID:16906134)
UniProt
GO_Central
MGI
RGD
PMID:2040280 PMID:16906134 PMID:27622773 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5905209 RGD:2302982 NCBI chr 8:111,759,781...111,784,237
Ensembl chr 8:111,759,776...111,784,296
JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:45,817,473...45,831,769
Ensembl chr17:45,817,767...45,831,769
JBrowse link
G Aarsd1 alanyl-tRNA synthetase domain containing 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:101,297,489...101,308,422
Ensembl chr11:101,297,665...101,308,441
JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:60,958,877...60,998,711
Ensembl chr 8:60,958,966...60,998,711
JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:24467666) GO_Central
MGI
PMID:24467666 GO_REF:0000033 NCBI chr 5:77,021,506...77,053,376
Ensembl chr 5:77,021,506...77,053,361
JBrowse link
amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr12:28,725,206...28,732,174
Ensembl chr12:28,725,230...28,732,174
JBrowse link
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 acts_upstream_of_or_within TAS (PMID:10037775) MGI PMID:10037775 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
G Apip APAF1 interacting protein acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 2:102,904,020...102,922,994
Ensembl chr 2:102,904,020...102,922,989
JBrowse link
G Asl argininosuccinate lyase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Asns asparagine synthetase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:7,675,169...7,693,209
Ensembl chr 6:7,675,169...7,693,254
JBrowse link
G Ass1 argininosuccinate synthetase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684
JBrowse link
G Bcat1 branched chain aminotransferase 1, cytosolic acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:144,939,561...145,021,883
Ensembl chr 6:144,939,561...145,021,910
JBrowse link
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
G Cbs cystathionine beta-synthase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Cth cystathionine gamma lyase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714
JBrowse link
G Enoph1 enolase-phosphatase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:100,186,887...100,216,784
Ensembl chr 5:100,187,844...100,216,619
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Hao1 hydroxyacid oxidase 1, liver acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 2:134,339,281...134,396,272
Ensembl chr 2:134,339,281...134,396,288
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 8:84,977,205...84,983,953
Ensembl chr 8:84,976,535...84,983,955
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
JBrowse link
G Otc ornithine transcarbamylase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
G Psat1 phosphoserine aminotransferase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr19:15,882,487...15,902,423
Ensembl chr19:15,882,042...15,924,701
JBrowse link
G Psph phosphoserine phosphatase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr11:120,527,591...120,534,602
Ensembl chr11:120,526,538...120,534,595
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 1:180,731,839...180,735,653
Ensembl chr 1:180,731,858...180,735,653
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr15:75,788,319...75,793,369
Ensembl chr15:75,788,326...75,793,409
JBrowse link
amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4930438A08Rik RIKEN cDNA 4930438A08 gene involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:58,165,654...58,185,116
Ensembl chr11:58,165,625...58,185,115
JBrowse link
G Bckdhb branched chain ketoacid dehydrogenase E1, beta polypeptide acts_upstream_of_or_within TAS (PMID:8268236) MGI PMID:8268236 NCBI chr 9:83,807,190...84,006,293
Ensembl chr 9:83,807,198...84,006,293
JBrowse link
G Etfa electron transferring flavoprotein, alpha polypeptide involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:55,361,720...55,419,528
Ensembl chr 9:55,361,792...55,419,527
JBrowse link
G Etfb electron transferring flavoprotein, beta polypeptide involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:43,093,496...43,107,224
Ensembl chr 7:43,093,507...43,107,224
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:44,485,712...44,490,233
Ensembl chr 7:44,465,811...44,490,233
JBrowse link
G Lao1 L-amino acid oxidase 1 acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:11907037) MGI
GO_Central
PMID:11907037 GO_REF:0000033 NCBI chr 4:118,819,164...118,826,107
Ensembl chr 4:118,818,775...118,826,109
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within IMP (PMID:12559843) MGI PMID:12559843 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Glul glutamate-ammonia ligase involved_in ISO RGD
MGI
PMID:28323 GO_REF:0000096 MGI:4417868 RGD:2301547 NCBI chr 1:153,775,692...153,785,469
Ensembl chr 1:153,775,690...153,785,469
JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:43,445,270...43,572,734
Ensembl chr 2:43,445,341...43,572,734
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IMP
ISO
(MGI:5305859|PMID:22081021) UniProt
MGI
PMID:22081021 GO_REF:0000119 MGI:4834177 MGI:5305859 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Ass1 argininosuccinate synthetase 1 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:12470967 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:631755 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684
JBrowse link
G Nags N-acetylglutamate synthase involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,036,339...102,040,354
Ensembl chr11:102,036,339...102,040,303
JBrowse link
G Otc ornithine transcarbamylase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Otc ornithine transcarbamylase involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:145,464,447...145,600,032
Ensembl chr 3:145,464,430...145,600,032
JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within IMP (PMID:11209059) MGI PMID:11209059 NCBI chr 7:84,234,367...84,255,150
Ensembl chr 7:84,234,367...84,255,930
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Nos2 nitric oxide synthase 2, inducible involved_in IDA
IBA
ISO
(MGI:3807772|PMID:1383204) BHF-UCL
GO_Central
MGI
PMID:1383204 GO_REF:0000033 GO_REF:0000119 MGI:3807772 MGI:4834177 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:132,159,204...132,178,127
Ensembl chr 7:132,159,207...132,178,127
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase, liver involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:15753084 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:8693655 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382
JBrowse link
G Arg2 arginase type II involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:15753084 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:8693655 NCBI chr12:79,177,562...79,203,075
Ensembl chr12:79,177,551...79,203,075
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:132,159,204...132,178,127
Ensembl chr 7:132,159,207...132,178,127
JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 4:141,473,986...141,486,574
Ensembl chr 4:141,473,983...141,486,574
JBrowse link
G Arg1 arginase, liver involved_in ISO RGD
MGI
PMID:4062872 GO_REF:0000096 MGI:4417868 RGD:2300098 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382
JBrowse link
G Arg2 arginase type II involved_in ISO RGD
MGI
PMID:16537391 GO_REF:0000096 MGI:4417868 RGD:1582129 NCBI chr12:79,177,562...79,203,075
Ensembl chr12:79,177,551...79,203,075
JBrowse link
G Asl argininosuccinate lyase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:17322279 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1625578 NCBI chr 3:145,464,447...145,600,032
Ensembl chr 3:145,464,430...145,600,032
JBrowse link
G Slc39a8 solute carrier family 39 (metal ion transporter), member 8 acts_upstream_of IMP (MGI:5912781|PMID:28481222) UniProt PMID:28481222 MGI:5912781 NCBI chr 3:135,522,644...135,594,333
Ensembl chr 3:135,531,040...135,594,333
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in ISO RGD
MGI
PMID:4062872 PMID:8586639 GO_REF:0000096 MGI:4417868 RGD:1599287 RGD:2300098 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Ass1 argininosuccinate synthetase 1 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:4062872 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:2300098 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684
JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dalrd3 DALR anticodon binding domain containing 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 9:108,444,710...108,449,972
Ensembl chr 9:108,447,085...108,449,973
JBrowse link
G Rars1 arginyl-tRNA synthetase 1 involved_in IDA
IBA
ISO
(MGI:3055639|PMID:12060739) CAFA
GO_Central
MGI
RGD
PMID:7082655 PMID:12060739 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:3055639 MGI:4417868 MGI:4834177 RGD:2303394 NCBI chr11:35,699,207...35,725,355
Ensembl chr11:35,699,208...35,725,333
JBrowse link
G Rars2 arginyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:34,614,941...34,660,167
Ensembl chr 4:34,614,957...34,660,167
JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tat tyrosine aminotransferase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:110,712,710...110,726,436
Ensembl chr 8:110,717,069...110,726,435
JBrowse link
aromatic amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:84,234,367...84,255,150
Ensembl chr 7:84,234,367...84,255,930
JBrowse link
G Gstz1 glutathione transferase zeta 1 (maleylacetoacetate isomerase) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:87,192,102...87,211,497
Ensembl chr12:87,193,939...87,211,497
JBrowse link
G Hpd 4-hydroxyphenylpyruvic acid dioxygenase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:123,309,870...123,320,786
Ensembl chr 5:123,309,870...123,320,790
JBrowse link
G Hpdl 4-hydroxyphenylpyruvate dioxygenase-like involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:116,677,104...116,678,705
Ensembl chr 4:116,677,101...116,678,904
JBrowse link
G Il4i1 interleukin 4 induced 1 acts_upstream_of_or_within IDA (PMID:15383589) MGI PMID:15383589 NCBI chr 7:44,485,712...44,490,233
Ensembl chr 7:44,465,811...44,490,233
JBrowse link
G Pah phenylalanine hydroxylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:87,357,657...87,419,999
Ensembl chr10:87,357,657...87,419,998
JBrowse link
G Tat tyrosine aminotransferase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:110,712,710...110,726,436
Ensembl chr 8:110,717,069...110,726,435
JBrowse link
G Th tyrosine hydroxylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865
JBrowse link
G Tph1 tryptophan hydroxylase 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:46,294,065...46,321,961
Ensembl chr 7:46,294,065...46,321,961
JBrowse link
G Tph2 tryptophan hydroxylase 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:114,914,546...115,020,927
Ensembl chr10:114,914,546...115,020,927
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase involved_in
acts_upstream_of_or_within
ISO
IBA
RGD
GO_Central
MGI
PMID:2887559 GO_REF:0000008 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2316002 NCBI chr 6:7,675,169...7,693,209
Ensembl chr 6:7,675,169...7,693,254
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase like 1 involved_in
acts_upstream_of_or_within
ISO
IBA
MGI
GO_Central
GO_REF:0000008 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr19:9,089,083...9,112,930
Ensembl chr19:9,087,232...9,113,000
JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr12:112,073,117...112,094,007
Ensembl chr12:112,073,113...112,093,993
JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:56,977,028...56,987,695
Ensembl chr16:56,977,028...56,987,704
JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nars1 asparaginyl-tRNA synthetase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:64,632,726...64,649,586
Ensembl chr18:64,632,718...64,649,723
JBrowse link
G Nars2 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:96,600,698...96,725,606
Ensembl chr 7:96,600,712...96,713,965
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:4193185) MGI
GO_Central
PMID:4193185 GO_REF:0000033 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:27,687,487...27,713,872
Ensembl chr 8:27,687,487...27,713,856
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial acts_upstream_of_or_within IDA (PMID:4193185) MGI PMID:4193185 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:40,505,933...40,557,847
Ensembl chr10:40,506,007...40,557,843
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1, soluble involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 involved_in ISO RGD
MGI
PMID:3759987 GO_REF:0000096 MGI:4417868 RGD:5135303 NCBI chr12:112,586,481...112,607,789
Ensembl chr12:112,586,479...112,607,794
JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in ISO RGD
MGI
PMID:71897 GO_REF:0000096 MGI:4417868 RGD:5135533 NCBI chr 1:177,590,742...177,624,064
Ensembl chr 1:177,590,528...177,624,077
JBrowse link
G Aspa aspartoacylase involved_in IGI (PMID:28077719) MGI PMID:28077719 NCBI chr11:73,195,813...73,217,677
Ensembl chr11:73,195,818...73,220,422
JBrowse link
G Ass1 argininosuccinate synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684
JBrowse link
G Ddo D-aspartate oxidase acts_upstream_of_or_within IMP (PMID:16525061) MGI PMID:16525061 NCBI chr10:40,505,933...40,557,847
Ensembl chr10:40,506,007...40,557,843
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1, soluble involved_in ISO RGD
MGI
PMID:2837211 GO_REF:0000096 MGI:4417868 RGD:2289377 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial involved_in ISO RGD
MGI
PMID:12686151 GO_REF:0000096 MGI:4417868 RGD:2289396 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
G Nat8l N-acetyltransferase 8-like involved_in IGI (PMID:28077719) MGI PMID:28077719 NCBI chr 5:34,153,328...34,163,260
Ensembl chr 5:34,153,328...34,163,260
JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars1 aspartyl-tRNA synthetase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000008 GO_REF:0000033 NCBI chr 1:128,291,444...128,345,153
Ensembl chr 1:128,291,444...128,345,105
JBrowse link
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:160,868,171...160,898,236
Ensembl chr 1:160,868,171...160,898,228
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 ureidopropionase, beta involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:75,242,745...75,277,513
Ensembl chr10:75,236,949...75,277,513
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase family 6, subfamily A1 involved_in ISO RGD
MGI
PMID:2768248 GO_REF:0000096 MGI:4417868 RGD:1599052 NCBI chr12:84,477,491...84,497,798
Ensembl chr12:84,477,491...84,497,778
JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase acts_upstream_of_or_within IDA (PMID:24467666) MGI PMID:24467666 NCBI chr 5:77,021,506...77,053,376
Ensembl chr 5:77,021,506...77,053,361
JBrowse link
G Dpys dihydropyrimidinase involved_in ISS
ISO
(MGI:5009216|PMID:8307005) BHF-UCL
MGI
RGD
PMID:8307005 GO_REF:0000096 MGI:4417868 MGI:5009216 RGD:1624990 NCBI chr15:39,631,881...39,720,866
Ensembl chr15:39,631,883...39,720,866
JBrowse link
G Upb1 ureidopropionase, beta involved_in ISO RGD
MGI
PMID:7626590 GO_REF:0000096 MGI:4417868 RGD:1624989 NCBI chr10:75,242,745...75,277,513
Ensembl chr10:75,236,949...75,277,513
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain aminotransferase 1, cytosolic acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:144,939,561...145,021,883
Ensembl chr 6:144,939,561...145,021,910
JBrowse link
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad8 acyl-Coenzyme A dehydrogenase family, member 8 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 9:26,885,434...26,910,872
Ensembl chr 9:26,885,431...26,910,862
JBrowse link
G Auh AU RNA binding protein/enoyl-coenzyme A hydratase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr13:52,989,155...53,083,742
Ensembl chr13:52,989,155...53,083,717
JBrowse link
G Bcat1 branched chain aminotransferase 1, cytosolic acts_upstream_of_or_within IDA (PMID:14755340) MGI PMID:14755340 NCBI chr 6:144,939,561...145,021,883
Ensembl chr 6:144,939,561...145,021,910
JBrowse link
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within
involved_in
ISO
IMP
(PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 GO_REF:0000096 MGI:4417868 RGD:1582175 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
G Bckdha branched chain ketoacid dehydrogenase E1, alpha polypeptide involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:25,329,371...25,358,178
Ensembl chr 7:25,329,371...25,358,406
JBrowse link
G Bckdhb branched chain ketoacid dehydrogenase E1, beta polypeptide involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:83,807,190...84,006,293
Ensembl chr 9:83,807,198...84,006,293
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:127,503,245...127,508,836
Ensembl chr 7:127,503,254...127,509,393
JBrowse link
G Dbt dihydrolipoamide branched chain transacylase E2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:116,306,776...116,343,630
Ensembl chr 3:116,306,719...116,343,630
JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:31,381,561...31,401,470
Ensembl chr12:31,381,276...31,401,452
JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:52,523,215...52,617,285
Ensembl chr 6:52,523,213...52,617,374
JBrowse link
G Hibch 3-hydroxyisobutyryl-Coenzyme A hydrolase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 1:52,884,197...52,960,145
Ensembl chr 1:52,884,088...52,960,145
JBrowse link
G Ivd isovaleryl coenzyme A dehydrogenase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:118,692,475...118,713,388
Ensembl chr 2:118,692,435...118,713,390
JBrowse link
G Ppm1k protein phosphatase 1K (PP2C domain containing) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:57,483,487...57,512,537
Ensembl chr 6:57,483,487...57,512,453
JBrowse link
G Slc25a44 solute carrier family 25, member 44 involved_in IMP
ISO
(MGI:6359503|PMID:31435015) UniProt
MGI
PMID:31435015 GO_REF:0000119 MGI:4834177 MGI:6359503 NCBI chr 3:88,317,801...88,334,303
Ensembl chr 3:88,317,805...88,332,446
JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain aminotransferase 1, cytosolic involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:144,939,561...145,021,883
Ensembl chr 6:144,939,561...145,021,910
JBrowse link
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within IMP (PMID:20237068) MGI PMID:20237068 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 acts_upstream_of_or_within
involved_in
IDA
IBA
ISO
(PMID:20097752), (PMID:24891507)
(PMID:24891507)
MGI
GO_Central
PMID:20097752 PMID:24891507 GO_REF:0000008 GO_REF:0000033 NCBI chr19:4,214,323...4,227,390
Ensembl chr19:4,214,323...4,225,478
JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carnmt1 carnosine N-methyltransferase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr19:18,648,099...18,684,565
Ensembl chr19:18,648,128...18,684,564
JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:7053379 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:10755426 NCBI chr 5:31,211,964...31,235,823
Ensembl chr 5:31,212,124...31,235,823
JBrowse link
G Otc ornithine transcarbamylase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:9472964 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:4144071 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
citrulline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:145,464,447...145,600,032
Ensembl chr 3:145,464,430...145,600,032
JBrowse link
G Ddah2 DDAH family member 2, ADMA independent NOT|involved_in ISO (PMID:21493890), (PMID:37296100) UniProt PMID:21493890 PMID:37296100 NCBI chr17:35,278,011...35,281,075
Ensembl chr17:35,278,011...35,281,071
JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:17213233) MGI PMID:17213233 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878
JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:15030387) MGI PMID:15030387 GO_REF:0000119 MGI:4834177 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Cth cystathionine gamma lyase involved_in ISO MGI GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IMP (MGI:5294309|PMID:12468440) UniProt PMID:12468440 MGI:5294309 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034
JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Cth cystathionine gamma lyase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714
JBrowse link
cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase, catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:77,661,817...77,701,771
Ensembl chr 9:77,661,817...77,701,767
JBrowse link
G Gclm glutamate-cysteine ligase, modifier subunit acts_upstream_of_or_within IMP (PMID:12384496) MGI PMID:12384496 NCBI chr 3:122,039,206...122,060,864
Ensembl chr 3:122,039,206...122,064,381
JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cars1 cysteinyl-tRNA synthetase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:143,110,967...143,153,827
Ensembl chr 7:143,110,967...143,153,827
JBrowse link
G Cars2 cysteinyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:11,564,017...11,600,781
Ensembl chr 8:11,563,977...11,600,783
JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IDA
IBA
ISO
(MGI:5442503|PMID:20603179) UniProt
GO_Central
MGI
PMID:20603179 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5442503 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
G Ddo D-aspartate oxidase involved_in IMP
IBA
ISO
IDA
(MGI:7482880|PMID:37189369), (MGI:7565916|PMID:26058797)
(MGI:5442503|PMID:20603179), (MGI:7565899|PMID:25747990), (MGI:7565904|PMID:32553892)
UniProt
GO_Central
MGI
PMID:20603179 PMID:25747990 PMID:26058797 PMID:32553892 PMID:37189369 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5442503 MGI:7482880 MGI:7565899 MGI:7565904 MGI:7565916 NCBI chr10:40,505,933...40,557,847
Ensembl chr10:40,506,007...40,557,843
JBrowse link
D-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
G Ddo D-aspartate oxidase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:40,505,933...40,557,847
Ensembl chr10:40,506,007...40,557,843
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within
ISO
IDA
IBA
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237) MGI
GO_Central
PMID:10557334 PMID:11054547 PMID:12021263 PMID:15710237 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:74,794,853...74,818,427
Ensembl chr11:74,797,185...74,816,774
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
G Srr serine racemase involved_in ISO MGI GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr11:74,794,853...74,818,427
Ensembl chr11:74,797,185...74,816,774
JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
TAS
IDA
(PMID:7592982), (PMID:7715703)
(PMID:10212311)
(PMID:9520487)
RGD
GO_Central
MGI
PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:10212311 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1580046 RGD:5130972 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO RGD
MGI
PMID:19540876 GO_REF:0000096 MGI:4417868 RGD:9588538 NCBI chr16:8,331,293...8,439,432
Ensembl chr16:8,331,293...8,439,432
JBrowse link
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 involved_in IMP (MGI:5697738|PMID:26430123) UniProt PMID:26430123 MGI:5697738 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
JBrowse link
G Gad1 glutamate decarboxylase 1 involved_in ISO
IBA
IMP
(MGI:892697|PMID:9177246) RGD
GO_Central
MGI
UniProt
PMID:9177246 PMID:17712632 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:892697 RGD:6480258 NCBI chr 2:70,392,109...70,432,358
Ensembl chr 2:70,383,416...70,432,358
JBrowse link
G Gad2 glutamic acid decarboxylase 2 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:22108820 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:401900601 NCBI chr 2:22,512,262...22,583,889
Ensembl chr 2:22,512,217...22,583,886
JBrowse link
G Slc1a3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 acts_upstream_of_or_within IMP (PMID:15305132) MGI PMID:15305132 NCBI chr15:8,663,608...8,742,648
Ensembl chr15:8,663,608...8,740,248
JBrowse link
G Slc38a1 solute carrier family 38, member 1 involved_in IMP (MGI:6795362|PMID:32668809) UniProt PMID:32668809 MGI:6795362 NCBI chr15:96,469,299...96,541,396
Ensembl chr15:96,469,299...96,540,794
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:8,331,293...8,439,432
Ensembl chr16:8,331,293...8,439,432
JBrowse link
G Aldh5a1 aldhehyde dehydrogenase family 5, subfamily A1 involved_in
acts_upstream_of_or_within
ISO
IMP
IBA
(PMID:11544478), (PMID:15262267) MGI
GO_Central
PMID:11544478 PMID:15262267 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:25,091,562...25,121,740
Ensembl chr13:25,091,562...25,121,644
JBrowse link
gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:8,331,293...8,439,432
Ensembl chr16:8,331,293...8,439,432
JBrowse link
G Aldh5a1 aldhehyde dehydrogenase family 5, subfamily A1 acts_upstream_of_or_within IMP (PMID:12067239), (PMID:16504488), (PMID:16647690) MGI PMID:12067239 PMID:16504488 PMID:16647690 NCBI chr13:25,091,562...25,121,740
Ensembl chr13:25,091,562...25,121,644
JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IMP (PMID:19114063) MGI PMID:19114063 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in IDA
IBA
ISO
(MGI:5320252|PMID:22228304) UniProt
GO_Central
MGI
PMID:22228304 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5320252 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
G Slc25a12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 involved_in ISO RGD
MGI
PMID:19764902 GO_REF:0000096 MGI:4417868 RGD:13628741 NCBI chr 2:71,104,614...71,198,125
Ensembl chr 2:71,101,407...71,198,093
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:70,392,109...70,432,358
Ensembl chr 2:70,383,416...70,432,358
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:4193185) MGI PMID:4193185 GO_REF:0000096 MGI:4417868 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:4193185) MGI PMID:4193185 GO_REF:0000096 MGI:4417868 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within IDA (PMID:4193185) MGI PMID:4193185 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial acts_upstream_of_or_within IDA (PMID:4193185) MGI PMID:4193185 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:9,618,173...9,648,195
Ensembl chr 1:9,618,173...9,650,898
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamic acid decarboxylase 2 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:8999827 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1625237 NCBI chr 2:22,512,262...22,583,889
Ensembl chr 2:22,512,217...22,583,886
JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:60,958,877...60,998,711
Ensembl chr 8:60,958,966...60,998,711
JBrowse link
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
G Aldh5a1 aldhehyde dehydrogenase family 5, subfamily A1 acts_upstream_of_or_within IMP (PMID:17854388) MGI PMID:17854388 NCBI chr13:25,091,562...25,121,740
Ensembl chr13:25,091,562...25,121,644
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin acts_upstream_of_or_within IMP (PMID:28701731) MGI PMID:28701731 NCBI chr 2:122,580,425...122,591,407
Ensembl chr 2:122,580,423...122,591,395
JBrowse link
G Dglucy D-glutamate cyclase involved_in IDA
IBA
(MGI:5901965|PMID:28266638) UniProt
GO_Central
PMID:28266638 GO_REF:0000033 MGI:5901965 NCBI chr12:100,745,316...100,838,869
Ensembl chr12:100,745,316...100,863,240
JBrowse link
G Fpgs folylpolyglutamyl synthetase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:32,572,621...32,594,163
Ensembl chr 2:32,572,621...32,594,157
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:77,661,817...77,701,771
Ensembl chr 9:77,661,817...77,701,767
JBrowse link
G Gclm glutamate-cysteine ligase, modifier subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:122,039,206...122,060,864
Ensembl chr 3:122,039,206...122,064,381
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:21447318), (PMID:24047895) UniProt PMID:21447318 PMID:24047895 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034
JBrowse link
G Glul glutamate-ammonia ligase involved_in ISO RGD
MGI
PMID:4403443 GO_REF:0000096 MGI:4417868 RGD:2301548 NCBI chr 1:153,775,692...153,785,469
Ensembl chr 1:153,775,690...153,785,469
JBrowse link
G Mthfs 5, 10-methenyltetrahydrofolate synthetase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:89,093,243...89,122,278
Ensembl chr 9:89,092,729...89,259,766
JBrowse link
G Mthfsl 5, 10-methenyltetrahydrofolate synthetase-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:88,567,696...88,602,381
Ensembl chr 9:88,570,655...88,602,349
JBrowse link
G Nags N-acetylglutamate synthase involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:12049647) GO_Central
MGI
PMID:12049647 GO_REF:0000033 NCBI chr11:102,036,339...102,040,354
Ensembl chr11:102,036,339...102,040,303
JBrowse link
G Tat tyrosine aminotransferase involved_in IDA
ISO
(MGI:5430853|PMID:21153519) UniProt
MGI
PMID:21153519 GO_REF:0000119 MGI:4834177 MGI:5430853 NCBI chr 8:110,712,710...110,726,436
Ensembl chr 8:110,717,069...110,726,435
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:28323 PMID:4403443 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2301547 RGD:2301548 NCBI chr 1:153,775,692...153,785,469
Ensembl chr 1:153,775,690...153,785,469
JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:31,215,362...31,243,806
Ensembl chr 1:31,215,482...31,243,806
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within
IDA
IBA
IMP
ISO
(MGI:5320252|PMID:22228304)
(PMID:16641247)
UniProt
GO_Central
MGI
PMID:16641247 PMID:22228304 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5320252 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO RGD
MGI
PMID:8463258 GO_REF:0000096 MGI:4417868 RGD:633710 NCBI chr 5:77,061,096...77,099,425
Ensembl chr 5:77,061,096...77,099,425
JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO RGD PMID:12522136 RGD:5135508 NCBI chr12:112,586,481...112,607,789
Ensembl chr12:112,586,479...112,607,794
JBrowse link
G Asns asparagine synthetase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:7,675,169...7,693,209
Ensembl chr 6:7,675,169...7,693,254
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin acts_upstream_of_or_within IMP (PMID:28701731) MGI PMID:28701731 NCBI chr 2:122,580,425...122,591,407
Ensembl chr 2:122,580,423...122,591,395
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:2474281 PMID:2803258 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:10755425 RGD:5132588 NCBI chr 5:31,211,964...31,235,823
Ensembl chr 5:31,212,124...31,235,823
JBrowse link
G Cps1 carbamoyl-phosphate synthetase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:67,151,294...67,270,426
Ensembl chr 1:67,162,185...67,270,418
JBrowse link
G Ctps1 cytidine 5'-triphosphate synthase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 4:120,397,065...120,427,473
Ensembl chr 4:120,397,065...120,427,473
JBrowse link
G Ctps2 cytidine 5'-triphosphate synthase 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr  X:161,684,264...161,817,537
Ensembl chr  X:161,684,234...161,815,504
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:87,019,828...87,069,189
Ensembl chr 6:87,019,828...87,069,179
JBrowse link
G Gfpt2 glutamine fructose-6-phosphate transaminase 2 acts_upstream_of_or_within TAS (PMID:9060444) MGI PMID:9060444 NCBI chr11:49,684,981...49,729,448
Ensembl chr11:49,685,005...49,729,440
JBrowse link
G Gls glutaminase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in IMP (MGI:5499916|PMID:23663782) UniProt PMID:23663782 MGI:5499916 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
G Gmps guanine monophosphate synthetase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 3:63,871,054...63,928,975
Ensembl chr 3:63,883,527...63,930,000
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (PMID:17237885) MGI PMID:17237885 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296
JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:56,977,028...56,987,695
Ensembl chr16:56,977,028...56,987,704
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) involved_in ISO RGD
MGI
PMID:3436958 GO_REF:0000096 MGI:4417868 RGD:1599004 NCBI chr11:68,876,527...68,899,286
Ensembl chr11:68,876,523...68,899,286
JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IMP (PMID:19114063) MGI PMID:19114063 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:77,061,096...77,099,425
Ensembl chr 5:77,061,096...77,099,425
JBrowse link
G Sirt4 sirtuin 4 involved_in IMP (MGI:5490691|PMID:23562301), (MGI:5499916|PMID:23663782) UniProt PMID:23562301 PMID:23663782 MGI:5490691 MGI:5499916 NCBI chr 5:115,616,065...115,628,322
Ensembl chr 5:115,616,069...115,622,784
JBrowse link
G Slc38a1 solute carrier family 38, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:96,469,299...96,541,396
Ensembl chr15:96,469,299...96,540,794
JBrowse link
G Ucp2 uncoupling protein 2 (mitochondrial, proton carrier) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:100,142,565...100,148,832
Ensembl chr 7:100,142,544...100,151,227
JBrowse link
glutaminyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:42,335,363...42,395,302
Ensembl chr18:42,335,363...42,395,259
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:108,385,204...108,393,140
Ensembl chr 9:108,384,905...108,393,140
JBrowse link
glutaminyl-tRNAGln biosynthesis via transamidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatb glutamyl-tRNA amidotransferase subunit B involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:85,481,409...85,562,945
Ensembl chr 3:85,481,426...85,562,929
JBrowse link
G Gatc glutamyl-tRNA amidotransferase subunit C involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:115,471,301...115,479,220
Ensembl chr 5:115,471,298...115,479,237
JBrowse link
G Qrsl1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:43,750,184...43,777,742
Ensembl chr10:43,750,184...43,777,741
JBrowse link
glutamyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:121,633,385...121,666,436
Ensembl chr 7:121,636,436...121,666,486
JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:185,093,614...185,160,557
Ensembl chr 1:185,095,241...185,160,557
JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) involved_in ISO from L-allothreonine in the absence of tetrahydrofolate RGD
MGI
PMID:3110140 GO_REF:0000096 MGI:4417868 RGD:2300383 NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) involved_in ISO from L-allothreonine in the absence of tetrahydrofolate RGD
MGI
PMID:3110140 GO_REF:0000096 MGI:4417868 RGD:2300383 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
JBrowse link
G Tha1 threonine aldolase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:117,758,775...117,764,352
Ensembl chr11:117,758,778...117,764,307
JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 (soluble) involved_in ISO
IBA
in the presence of tetrahydrofolate RGD
GO_Central
MGI
PMID:3110140 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2300383 NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) involved_in ISO
IBA
in the presence of tetrahydrofolate RGD
GO_Central
MGI
PMID:3110140 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2300383 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine-glyoxylate aminotransferase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:12383475 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1599457 NCBI chr 1:93,062,962...93,073,143
Ensembl chr 1:93,062,962...93,073,143
JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:10,358,602...10,410,244
Ensembl chr15:10,358,618...10,410,239
JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 9:108,174,104...108,179,501
Ensembl chr 9:108,174,052...108,179,501
JBrowse link
G Gldc glycine decarboxylase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:30,075,847...30,152,829
Ensembl chr19:30,075,847...30,152,829
JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:108,174,104...108,179,501
Ensembl chr 9:108,174,052...108,179,501
JBrowse link
G Gcsh glycine cleavage system protein H (aminomethyl carrier) involved_in ISO
IBA
RGD
GO_Central
PMID:6402507 GO_REF:0000033 RGD:1598699 NCBI chr 8:117,708,706...117,720,237
Ensembl chr 8:117,708,549...117,720,276
JBrowse link
G Gldc glycine decarboxylase involved_in
acts_upstream_of_or_within
ISO
IBA
RGD
GO_Central
MGI
PMID:6778858 GO_REF:0000008 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1642728 NCBI chr19:30,075,847...30,152,829
Ensembl chr19:30,075,847...30,152,829
JBrowse link
glycine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baat bile acid-Coenzyme A: amino acid N-acyltransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:49,489,416...49,507,915
Ensembl chr 4:49,489,422...49,506,557
JBrowse link
G Fpgs folylpolyglutamyl synthetase involved_in ISO (PMID:10964921) UniProt PMID:10964921 NCBI chr 2:32,572,621...32,594,163
Ensembl chr 2:32,572,621...32,594,157
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840
JBrowse link
G Gldc glycine decarboxylase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr19:30,075,847...30,152,829
Ensembl chr19:30,075,847...30,152,829
JBrowse link
G Glyat glycine-N-acyltransferase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:12,610,672...12,629,101
Ensembl chr19:12,610,672...12,631,275
JBrowse link
G Gnmt glycine N-methyltransferase involved_in ISO RGD
MGI
PMID:18501206 GO_REF:0000096 MGI:4417868 RGD:7242952 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094
JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:30988181) MGI PMID:30988181 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013
JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IMP (PMID:19114063) MGI PMID:19114063 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) involved_in ISO RGD
MGI
PMID:15671219 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1359815 NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) involved_in ISO RGD
MGI
PMID:10457370 PMID:15671219 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1359815 RGD:2300380 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
JBrowse link
glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 acts_upstream_of_or_within IMP (PMID:19470612) MGI PMID:19470612 NCBI chr 6:55,014,986...55,056,489
Ensembl chr 6:55,014,992...55,056,485
JBrowse link
histidyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hars1 histidyl-tRNA synthetase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:36,899,581...36,916,258
Ensembl chr18:36,899,581...36,916,258
JBrowse link
G Hars2 histidyl-tRNA synthetase 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:36,916,257...36,925,615
Ensembl chr18:36,916,061...36,925,615
JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blmh bleomycin hydrolase involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:76,836,482...76,878,215
Ensembl chr11:76,815,635...76,878,205
JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
JBrowse link
homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:10953023), (PMID:10993757), (PMID:15131763), (PMID:15555590), (PMID:15622513), (PMID:15916860), (PMID:16226235), (PMID:18541157), (PMID:7878023) MGI PMID:7878023 PMID:10953023 PMID:10993757 PMID:15131763 PMID:15555590 More... GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Cps1 carbamoyl-phosphate synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:67,151,294...67,270,426
Ensembl chr 1:67,162,185...67,270,418
JBrowse link
G Cth cystathionine gamma lyase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714
JBrowse link
G Dpep1 dipeptidase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:123,913,069...123,928,551
Ensembl chr 8:123,912,981...123,928,551
JBrowse link
G Mmut methylmalonyl-Coenzyme A mutase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:41,245,576...41,272,880
Ensembl chr17:41,245,576...41,272,879
JBrowse link
G Mthfr methylenetetrahydrofolate reductase involved_in ISO RGD
MGI
PMID:18726220 GO_REF:0000119 MGI:4834177 RGD:2317121 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:11730351 PMID:21121936 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1601423 RGD:7207080 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IMP
IBA
(MGI:3710265|PMID:17369066) BHF-UCL
GO_Central
PMID:17369066 GO_REF:0000033 MGI:3710265 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
JBrowse link
G Nox4 NADPH oxidase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:86,893,638...87,047,918
Ensembl chr 7:86,895,304...87,047,918
JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:92,421,828...92,490,481
Ensembl chr 9:92,424,276...92,490,481
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in IDA (MGI:6202004|PMID:16447251) UniProt PMID:16447251 MGI:6202004 NCBI chr 5:137,015,873...137,025,500
Ensembl chr 5:137,015,873...137,025,502
JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ilvbl ilvB (bacterial acetolactate synthase)-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:78,410,178...78,420,336
Ensembl chr10:78,410,180...78,420,336
JBrowse link
G Sds serine dehydratase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:120,614,612...120,621,997
Ensembl chr 5:120,614,591...120,621,997
JBrowse link
G Sdsl serine dehydratase-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:120,596,258...120,610,890
Ensembl chr 5:120,596,251...120,610,875
JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-Coenzyme A dehydrogenase, short/branched chain involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:131,012,330...131,047,940
Ensembl chr 7:131,012,330...131,050,673
JBrowse link
G Acat1 acetyl-Coenzyme A acetyltransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:53,491,822...53,521,650
Ensembl chr 9:53,491,822...53,521,682
JBrowse link
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within
involved_in
ISO
IMP
(PMID:17767905) RGD
MGI
PMID:11733007 PMID:17767905 GO_REF:0000096 MGI:4417868 RGD:1582175 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in ISO RGD
MGI
PMID:27472223 GO_REF:0000096 MGI:4417868 RGD:39131293 NCBI chr 7:127,503,245...127,508,836
Ensembl chr 7:127,503,254...127,509,393
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:150,784,892...150,787,438
Ensembl chr  X:150,784,841...150,787,438
JBrowse link
isoleucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within IMP (PMID:14755340) MGI PMID:14755340 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
isoleucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iars1 isoleucyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
(MGI:3055639|PMID:12060739) CAFA
GO_Central
MGI
PMID:12060739 GO_REF:0000008 GO_REF:0000033 MGI:3055639 NCBI chr13:49,835,606...49,887,743
Ensembl chr13:49,835,576...49,887,743
JBrowse link
G Iars2 isoleucine-tRNA synthetase 2, mitochondrial involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:185,018,839...185,061,615
Ensembl chr 1:185,016,923...185,061,593
JBrowse link
kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:60,958,877...60,998,711
Ensembl chr 8:60,958,966...60,998,711
JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IMP
IBA
ISO
(MGI:5780894|PMID:26752518) UniProt
GO_Central
MGI
PMID:26752518 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5780894 NCBI chr 1:175,459,759...175,488,419
Ensembl chr 1:175,447,947...175,489,682
JBrowse link
G Kyat1 kynurenine aminotransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:30,075,136...30,096,307
Ensembl chr 2:30,075,136...30,095,859
JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in IDA (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 3:142,406,780...142,450,672
Ensembl chr 3:142,406,812...142,452,631
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine-glyoxylate aminotransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:93,062,962...93,073,143
Ensembl chr 1:93,062,962...93,073,143
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:10,358,602...10,410,244
Ensembl chr15:10,358,618...10,410,239
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpt2 glutamic pyruvate transaminase (alanine aminotransferase) 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:86,219,090...86,255,531
Ensembl chr 8:86,219,205...86,254,189
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine-glyoxylate aminotransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:93,062,962...93,073,143
Ensembl chr 1:93,062,962...93,073,143
JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Cdo1 cysteine dioxygenase 1, cytosolic involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:16611641 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2301357 NCBI chr18:46,846,260...46,861,569
Ensembl chr18:46,846,260...46,861,462
JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:102,085,432...102,112,685
Ensembl chr15:102,085,434...102,113,159
JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdo1 cysteine dioxygenase 1, cytosolic acts_upstream_of_or_within TAS (PMID:11602353) MGI PMID:11602353 NCBI chr18:46,846,260...46,861,569
Ensembl chr18:46,846,260...46,861,462
JBrowse link
G Csad cysteine sulfinic acid decarboxylase involved_in
acts_upstream_of_or_within
ISO
TAS
(PMID:11997111) MGI PMID:11997111 GO_REF:0000096 MGI:4417868 NCBI chr15:102,085,432...102,112,685
Ensembl chr15:102,085,434...102,113,159
JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble ISO RGD PMID:16489927 RGD:13504861 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial ISO RGD PMID:16489927 RGD:13504861 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
L-histidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227
JBrowse link
L-histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:93,359,200...93,375,973
Ensembl chr10:93,359,200...93,375,895
JBrowse link
G Ftcd formiminotransferase cyclodeaminase acts_upstream_of_or_within TAS (PMID:10773664) MGI PMID:10773664 NCBI chr10:76,411,482...76,426,172
Ensembl chr10:76,411,482...76,426,172
JBrowse link
G Hal histidine ammonia lyase acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:8486363) MGI
GO_Central
PMID:8486363 GO_REF:0000033 NCBI chr10:93,324,630...93,352,623
Ensembl chr10:93,324,630...93,355,166
JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
TAS
(PMID:11478947)
(PMID:11781289)
MGI
GO_Central
PMID:11478947 PMID:11781289 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:126,435,579...126,465,942
Ensembl chr 2:126,435,587...126,461,219
JBrowse link
G Uroc1 urocanase domain containing 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:90,310,221...90,341,533
Ensembl chr 6:90,310,266...90,341,533
JBrowse link
L-histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:93,359,200...93,375,973
Ensembl chr10:93,359,200...93,375,895
JBrowse link
L-histidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr10:93,359,200...93,375,973
Ensembl chr10:93,359,200...93,375,895
JBrowse link
G Ftcd formiminotransferase cyclodeaminase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr10:76,411,482...76,426,172
Ensembl chr10:76,411,482...76,426,172
JBrowse link
G Hal histidine ammonia lyase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr10:93,324,630...93,352,623
Ensembl chr10:93,324,630...93,355,166
JBrowse link
G Hdc histidine decarboxylase involved_in ISO RGD
MGI
PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... GO_REF:0000096 MGI:4417868 RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chr 2:126,435,579...126,465,942
Ensembl chr 2:126,435,587...126,461,219
JBrowse link
G Uroc1 urocanase domain containing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 6:90,310,221...90,341,533
Ensembl chr 6:90,310,266...90,341,533
JBrowse link
L-kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kmo kynurenine 3-monooxygenase involved_in ISO RGD
MGI
PMID:23690293 GO_REF:0000096 MGI:4417868 RGD:13513904 NCBI chr 1:175,459,759...175,488,419
Ensembl chr 1:175,447,947...175,489,682
JBrowse link
G Kyat1 kynurenine aminotransferase 1 involved_in ISO RGD
MGI
PMID:7796908 GO_REF:0000096 MGI:4417868 RGD:9685040 NCBI chr 2:30,075,136...30,096,307
Ensembl chr 2:30,075,136...30,095,859
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain aminotransferase 1, cytosolic involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:144,939,561...145,021,883
Ensembl chr 6:144,939,561...145,021,910
JBrowse link
G Bcat2 branched chain aminotransferase 2, mitochondrial involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:11733007 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1582175 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in ISO RGD
MGI
PMID:27472223 GO_REF:0000096 MGI:4417868 RGD:39131293 NCBI chr 7:127,503,245...127,508,836
Ensembl chr 7:127,503,254...127,509,393
JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-Coenzyme A lyase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:135,673,776...135,689,926
Ensembl chr 4:135,673,759...135,689,928
JBrowse link
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:75,921,983...76,043,632
Ensembl chr 9:75,922,137...76,043,632
JBrowse link
G Ivd isovaleryl coenzyme A dehydrogenase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 2:118,692,475...118,713,388
Ensembl chr 2:118,692,435...118,713,390
JBrowse link
G Mccc2 methylcrotonoyl-Coenzyme A carboxylase 2 (beta) involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:100,085,040...100,152,147
Ensembl chr13:100,085,038...100,152,147
JBrowse link
L-leucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain aminotransferase 2, mitochondrial acts_upstream_of_or_within IMP (PMID:17767905)
(PMID:14755340)
MGI PMID:14755340 PMID:17767905 NCBI chr 7:45,219,773...45,239,134
Ensembl chr 7:45,219,577...45,239,135
JBrowse link
G Dao D-amino acid oxidase acts_upstream_of_or_within IMP (PMID:15026304) MGI PMID:15026304 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within IDA (PMID:10567240) MGI PMID:10567240 NCBI chr 6:23,072,172...23,132,985
Ensembl chr 6:23,072,172...23,132,985
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid oxidase involved_in ISS
IBA
ISO
(MGI:1353685|PMID:10642506) UniProt
GO_Central
MGI
PMID:10642506 GO_REF:0000033 GO_REF:0000119 MGI:1353685 MGI:4834177 NCBI chr11:77,771,440...77,784,698
Ensembl chr11:77,771,441...77,784,922
JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine methyltransferase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:93,753,399...93,774,266
Ensembl chr13:93,753,183...93,774,469
JBrowse link
G Bhmt1b betaine--homocysteine S-methyltransferase 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:87,774,411...87,776,278
Ensembl chr18:87,774,410...87,776,275
JBrowse link
G Bhmt2 betaine-homocysteine methyltransferase 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:93,792,605...93,810,810
Ensembl chr13:93,792,228...93,810,810
JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:28,725,206...28,732,174
Ensembl chr12:28,725,230...28,732,174
JBrowse link
G Apip APAF1 interacting protein involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:102,904,020...102,922,994
Ensembl chr 2:102,904,020...102,922,989
JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:100,186,887...100,216,784
Ensembl chr 5:100,187,844...100,216,619
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:84,977,205...84,983,953
Ensembl chr 8:84,976,535...84,983,955
JBrowse link
G Mtap methylthioadenosine phosphorylase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:89,055,607...89,099,327
Ensembl chr 4:89,055,359...89,099,318
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:84,234,367...84,255,150
Ensembl chr 7:84,234,367...84,255,930
JBrowse link
G Gstz1 glutathione transferase zeta 1 (maleylacetoacetate isomerase) involved_in
acts_upstream_of_or_within
IBA
TAS
(PMID:10373324) GO_Central
MGI
PMID:10373324 GO_REF:0000033 NCBI chr12:87,192,102...87,211,497
Ensembl chr12:87,193,939...87,211,497
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:37,400,104...37,452,388
Ensembl chr16:37,400,515...37,452,382
JBrowse link
G Hpd 4-hydroxyphenylpyruvic acid dioxygenase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:123,309,870...123,320,786
Ensembl chr 5:123,309,870...123,320,790
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,485,712...44,490,233
Ensembl chr 7:44,465,811...44,490,233
JBrowse link
G Il4i1b interleukin 4 induced 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,465,794...44,490,228
Ensembl chr 7:44,465,811...44,490,233
JBrowse link
G Pah phenylalanine hydroxylase involved_in
acts_upstream_of_or_within
IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr10:87,357,657...87,419,999
Ensembl chr10:87,357,657...87,419,998
JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in ISO
IBA
RGD
GO_Central
PMID:4155291 GO_REF:0000033 RGD:5128604 NCBI chr 5:45,591,374...45,607,571
Ensembl chr 5:45,591,363...45,607,578
JBrowse link
G Tat tyrosine aminotransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:110,712,710...110,726,436
Ensembl chr 8:110,717,069...110,726,435
JBrowse link
L-phenylalanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase involved_in ISO RGD
MGI
PMID:16953590 GO_REF:0000096 MGI:4417868 RGD:1601531 NCBI chr10:87,357,657...87,419,999
Ensembl chr10:87,357,657...87,419,998
JBrowse link
G Pcbd1 pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:60,925,110...60,930,108
Ensembl chr10:60,925,110...60,930,103
JBrowse link
G Spr sepiapterin reductase acts_upstream_of_or_within IMP (PMID:16532389) MGI PMID:16532389 NCBI chr 6:85,110,662...85,114,746
Ensembl chr 6:85,107,158...85,114,748
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Noxred1 NADP+ dependent oxidoreductase domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:87,267,897...87,285,375
Ensembl chr12:87,267,814...87,285,506
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:120,527,591...120,534,602
Ensembl chr11:120,526,538...120,534,595
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:180,731,839...180,735,653
Ensembl chr 1:180,731,858...180,735,653
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:75,788,319...75,793,369
Ensembl chr15:75,788,326...75,793,409
JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phgdh 3-phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
G Psat1 phosphoserine aminotransferase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:15,882,487...15,902,423
Ensembl chr19:15,882,042...15,924,701
JBrowse link
G Psph phosphoserine phosphatase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) involved_in ISO RGD
MGI
PMID:10457370 GO_REF:0000096 MGI:4417868 RGD:2300380 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Sds serine dehydratase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:120,614,612...120,621,997
Ensembl chr 5:120,614,591...120,621,997
JBrowse link
G Sdsl serine dehydratase-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:120,596,258...120,610,890
Ensembl chr 5:120,596,251...120,610,875
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
JBrowse link
L-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine-glyoxylate aminotransferase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:93,062,962...93,073,143
Ensembl chr 1:93,062,962...93,073,143
JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212
JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IMP (PMID:19114063) MGI PMID:19114063 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
G Psph phosphoserine phosphatase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
JBrowse link
G Srr serine racemase involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:10557334), (PMID:12021263), (PMID:15710237), (PMID:16517698)
(PMID:11054547)
MGI PMID:10557334 PMID:11054547 PMID:12021263 PMID:15710237 PMID:16517698 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr11:74,794,853...74,818,427
Ensembl chr11:74,797,185...74,816,774
JBrowse link
leucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lars1 leucyl-tRNA synthetase 1 involved_in IDA
IBA
ISO
(MGI:3055639|PMID:12060739) CAFA
GO_Central
MGI
PMID:12060739 GO_REF:0000033 GO_REF:0000119 MGI:3055639 MGI:4834177 NCBI chr18:42,335,363...42,395,302
Ensembl chr18:42,335,363...42,395,259
JBrowse link
G Lars2 leucyl-tRNA synthetase, mitochondrial involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:123,196,001...123,291,731
Ensembl chr 9:123,195,992...123,291,731
JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:4,294,793...4,309,656
Ensembl chr 9:4,294,793...4,309,471
JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:23,072,172...23,132,985
Ensembl chr 6:23,072,172...23,132,985
JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:23,072,172...23,132,985
Ensembl chr 6:23,072,172...23,132,985
JBrowse link
lysyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kars1 lysyl-tRNA synthetase 1 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:7082655 PMID:7372681 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:2303393 RGD:2303394 NCBI chr 8:112,720,071...112,737,986
Ensembl chr 8:112,720,075...112,737,955
JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dct dopachrome tautomerase involved_in IDA
IBA
IMP
(MGI:3690794|PMID:2169885)
(MGI:6827472|PMID:33100333)
UniProt
GO_Central
PMID:2169885 PMID:33100333 GO_REF:0000033 MGI:3690794 MGI:6827472 NCBI chr14:118,250,202...118,289,658
Ensembl chr14:118,250,202...118,289,656
JBrowse link
G Oca2 oculocutaneous albinism II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:55,889,341...56,186,266
Ensembl chr 7:55,889,508...56,186,266
JBrowse link
G Slc45a2 solute carrier family 45, member 2 involved_in IMP
ISO
(MGI:7338895|PMID:35469906) UniProt
MGI
PMID:35469906 GO_REF:0000119 MGI:4834177 MGI:7338895 NCBI chr15:11,000,807...11,029,319
Ensembl chr15:11,000,807...11,029,319
JBrowse link
G Tyrp1 tyrosinase-related protein 1 involved_in TAS (MGI:3687692|PMID:9918801) UniProt PMID:9918801 MGI:3687692 NCBI chr 4:80,752,360...80,769,973
Ensembl chr 4:80,752,360...80,769,956
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr12:28,725,206...28,732,174
Ensembl chr12:28,725,230...28,732,174
JBrowse link
G Apip APAF1 interacting protein acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 2:102,904,020...102,922,994
Ensembl chr 2:102,904,020...102,922,989
JBrowse link
G Bhmt betaine-homocysteine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IDA
(PMID:15217352) RGD
MGI
PMID:15217352 PMID:15845641 GO_REF:0000096 MGI:4417868 RGD:1359026 NCBI chr13:93,753,399...93,774,266
Ensembl chr13:93,753,183...93,774,469
JBrowse link
G Bhmt1b betaine--homocysteine S-methyltransferase 1B involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:87,774,411...87,776,278
Ensembl chr18:87,774,410...87,776,275
JBrowse link
G Bhmt2 betaine-homocysteine methyltransferase 2 acts_upstream_of_or_within ISO (PMID:11087663) MGI PMID:11087663 NCBI chr13:93,792,605...93,810,810
Ensembl chr13:93,792,228...93,810,810
JBrowse link
G Enoph1 enolase-phosphatase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:100,186,887...100,216,784
Ensembl chr 5:100,187,844...100,216,619
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 8:84,977,205...84,983,953
Ensembl chr 8:84,976,535...84,983,955
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227
JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:15217352) MGI
GO_Central
PMID:15217352 GO_REF:0000033 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
(PMID:11158293) RGD
GO_Central
MGI
PMID:11158293 PMID:11730351 PMID:15845641 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1359026 RGD:1601423 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IMP
IBA
ISO
(MGI:3710265|PMID:17369066) BHF-UCL
GO_Central
MGI
PMID:17369066 GO_REF:0000033 GO_REF:0000119 MGI:3710265 MGI:4834177 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:40,826,969...40,846,385
Ensembl chr14:40,826,992...40,846,369
JBrowse link
methionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:28,725,206...28,732,174
Ensembl chr12:28,725,230...28,732,174
JBrowse link
G Gnmt glycine N-methyltransferase acts_upstream_of_or_within IMP (PMID:17937387) MGI PMID:17937387 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase involved_in IMP (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
JBrowse link
G Mthfr methylenetetrahydrofolate reductase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO RGD
MGI
PMID:21121936 GO_REF:0000096 MGI:4417868 RGD:7207080 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
JBrowse link
methionyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mars1 methionine-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
(MGI:3055639|PMID:12060739) CAFA
GO_Central
MGI
PMID:12060739 GO_REF:0000008 GO_REF:0000033 GO_REF:0000119 MGI:3055639 MGI:4834177 NCBI chr10:127,132,090...127,147,655
Ensembl chr10:127,132,090...127,147,655
JBrowse link
G Mars2 methionine-tRNA synthetase 2 (mitochondrial) involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:55,276,336...55,279,217
Ensembl chr 1:55,276,336...55,287,629
JBrowse link
mitochondrial alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars2 alanyl-tRNA synthetase 2, mitochondrial involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:45,817,473...45,831,769
Ensembl chr17:45,817,767...45,831,769
JBrowse link
mitochondrial asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:160,868,171...160,898,236
Ensembl chr 1:160,868,171...160,898,228
JBrowse link
mitochondrial glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:55,014,986...55,056,489
Ensembl chr 6:55,014,992...55,056,485
JBrowse link
mitochondrial seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sars2 seryl-aminoacyl-tRNA synthetase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,441,393...28,453,304
Ensembl chr 7:28,441,417...28,453,296
JBrowse link
mitochondrial tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:99,047,423...99,128,546
Ensembl chr 3:99,048,384...99,146,502
JBrowse link
mitochondrial tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Yars2 tyrosyl-tRNA synthetase 2 (mitochondrial) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:16,120,829...16,127,504
Ensembl chr16:16,120,829...16,127,504
JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:10,358,602...10,410,244
Ensembl chr15:10,358,618...10,410,239
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:133,630,416...133,728,755
Ensembl chr 1:133,627,195...133,728,779
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:133,630,416...133,728,755
Ensembl chr 1:133,627,195...133,728,779
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ataxia, cerebellar, Cayman type involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:81,040,338...81,067,037
Ensembl chr10:81,040,342...81,066,667
JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 involved_in ISO RGD
MGI
PMID:8166639 GO_REF:0000096 MGI:4417868 RGD:401851045 NCBI chr10:80,662,490...80,665,124
Ensembl chr10:80,662,516...80,665,124
JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
ornithine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin2 antizyme inhibitor 2 acts_upstream_of_or_within IDA (PMID:16916800) MGI PMID:16916800 NCBI chr 4:128,824,026...128,856,250
Ensembl chr 4:128,824,026...128,856,235
JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:163,348,731...163,414,827
Ensembl chr 2:163,348,728...163,414,830
JBrowse link
G Otc ornithine transcarbamylase involved_in ISO RGD
MGI
PMID:4062872 GO_REF:0000096 MGI:4417868 RGD:2300098 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
G Slc25a2 solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:37,770,431...37,771,776
Ensembl chr18:37,770,431...37,771,776
JBrowse link
phenylalanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fars2 phenylalanine-tRNA synthetase 2, mitochondrial involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:36,301,373...36,721,569
Ensembl chr13:36,301,395...36,910,254
JBrowse link
G Farsa phenylalanyl-tRNA synthetase, alpha subunit involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:85,583,597...85,595,886
Ensembl chr 8:85,583,618...85,595,886
JBrowse link
G Farsb phenylalanyl-tRNA synthetase, beta subunit involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:78,394,593...78,465,530
Ensembl chr 1:78,394,612...78,465,534
JBrowse link
G Lrrc47 leucine rich repeat containing 47 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:154,096,260...154,105,969
Ensembl chr 4:154,096,188...154,105,970
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IMP (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IMP (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447
JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase involved_in ISO RGD
MGI
PMID:15779086 GO_REF:0000096 MGI:4417868 RGD:2289784 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinson disease (autosomal recessive, early onset) 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:150,981,590...150,994,378
Ensembl chr 4:150,981,590...150,998,894
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:120,527,591...120,534,602
Ensembl chr11:120,526,538...120,534,595
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:180,731,839...180,735,653
Ensembl chr 1:180,731,858...180,735,653
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in
acts_upstream_of_or_within
IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr15:75,788,319...75,793,369
Ensembl chr15:75,788,326...75,793,409
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
G Prodh proline dehydrogenase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:17,889,593...17,907,147
Ensembl chr16:17,878,221...17,908,067
JBrowse link
G Prodh2 proline dehydrogenase (oxidase) 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:30,193,011...30,212,830
Ensembl chr 7:30,193,047...30,212,827
JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:139,348,404...139,377,002
Ensembl chr 4:139,350,177...139,377,001
JBrowse link
G Prodh proline dehydrogenase involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:17,889,593...17,907,147
Ensembl chr16:17,878,221...17,908,067
JBrowse link
G Prodh2 proline dehydrogenase (oxidase) 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:30,193,011...30,212,830
Ensembl chr 7:30,193,047...30,212,827
JBrowse link
proline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 4:139,348,404...139,377,002
Ensembl chr 4:139,350,177...139,377,001
JBrowse link
G Prodh proline dehydrogenase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr16:17,889,593...17,907,147
Ensembl chr16:17,878,221...17,908,067
JBrowse link
G Prodh2 proline dehydrogenase (oxidase) 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 7:30,193,011...30,212,830
Ensembl chr 7:30,193,047...30,212,827
JBrowse link
prolyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in IDA
IBA
ISO
(MGI:3055639|PMID:12060739) CAFA
GO_Central
MGI
PMID:12060739 GO_REF:0000033 GO_REF:0000119 MGI:3055639 MGI:4834177 NCBI chr 1:185,093,614...185,160,557
Ensembl chr 1:185,095,241...185,160,557
JBrowse link
G Pars2 prolyl-tRNA synthetase (mitochondrial)(putative) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:106,508,266...106,512,479
Ensembl chr 4:106,508,266...106,512,479
JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:141,473,986...141,486,574
Ensembl chr 4:141,473,983...141,486,574
JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin1 antizyme inhibitor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:38,487,674...38,523,506
Ensembl chr15:38,487,671...38,519,510
JBrowse link
G Azin2 antizyme inhibitor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:128,824,026...128,856,250
Ensembl chr 4:128,824,026...128,856,235
JBrowse link
G Ldc1 leucine decarboxylase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:130,102,816...130,116,221
Ensembl chr 4:130,102,902...130,116,194
JBrowse link
G Odc1 ornithine decarboxylase, structural 1 involved_in IDA
IBA
(MGI:5574513|PMID:24967154) UniProt
GO_Central
PMID:24967154 GO_REF:0000033 MGI:5574513 NCBI chr12:17,594,906...17,601,503
Ensembl chr12:17,594,795...17,601,506
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IMP (MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:4830440 NCBI chr 7:126,170,571...126,184,991
Ensembl chr 7:126,170,379...126,184,989
JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh1 fumarate hydratase 1 involved_in IMP (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201
JBrowse link
G Slc7a7 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:17376816) MGI
GO_Central
PMID:17376816 GO_REF:0000033 NCBI chr14:54,606,899...54,657,525
Ensembl chr14:54,606,899...54,655,237
JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins1 insulin I involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914
JBrowse link
G Ins2 insulin II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118
JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:17200146) MGI PMID:17200146 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator involved_in ISO RGD
MGI
PMID:19858196 GO_REF:0000096 MGI:4417868 RGD:6484536 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605
JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:21490221), (PMID:25429150)
(PMID:24548853)
MGI PMID:21490221 PMID:24548853 PMID:25429150 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 involved_in IMP (MGI:5490691|PMID:23562301) CACAO PMID:23562301 MGI:5490691 NCBI chr 5:115,616,065...115,628,322
Ensembl chr 5:115,616,069...115,622,784
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy S-adenosylhomocysteine hydrolase acts_upstream_of_or_within
involved_in
ISO
IDA
(PMID:12023972) RGD
MGI
PMID:11741948 PMID:12023972 GO_REF:0000096 MGI:4417868 RGD:730275 NCBI chr 2:154,901,230...154,916,417
Ensembl chr 2:154,901,230...154,916,417
JBrowse link
G Ahcyl adenosylhomocysteinase like involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:45,973,348...45,975,440
Ensembl chr16:45,973,348...45,975,440
JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate methyltransferase involved_in ISO RGD
MGI
PMID:15533043 GO_REF:0000096 MGI:4417868 RGD:1359081 NCBI chr10:80,093,985...80,096,846
Ensembl chr10:80,093,985...80,096,846
JBrowse link
G Gnmt glycine N-methyltransferase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:15347642 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1359070 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase involved_in ISO RGD
MGI
PMID:9192075 GO_REF:0000096 MGI:4417868 RGD:2289655 NCBI chr 4:152,381,671...152,391,583
Ensembl chr 4:152,381,684...152,391,578
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 involved_in ISO RGD
MGI
PMID:8263531 GO_REF:0000096 MGI:4417868 RGD:729481 NCBI chr10:7,503,608...7,556,922
Ensembl chr10:7,505,137...7,556,900
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase involved_in ISO RGD
MGI
PMID:8344945 GO_REF:0000096 MGI:4417868 RGD:729486 NCBI chr11:59,861,440...59,937,394
Ensembl chr11:59,861,440...59,937,315
JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:27,078,405...27,138,344
Ensembl chr 2:27,078,405...27,138,349
JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnmt glycine N-methyltransferase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:18501206 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:7242952 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094
JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sephs1 selenophosphate synthetase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:4,886,375...4,915,368
Ensembl chr 2:4,886,375...4,915,368
JBrowse link
G Sephs2 selenophosphate synthetase 2 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:17346238) GO_Central
MGI
PMID:17346238 GO_REF:0000033 NCBI chr 7:126,871,051...126,873,231
Ensembl chr 7:126,871,051...126,873,227
JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:91,226,017...91,248,797
Ensembl chr 1:91,226,060...91,248,797
JBrowse link
selenocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Txnrd1 thioredoxin reductase 1 involved_in ISO RGD
MGI
PMID:10512699 GO_REF:0000096 MGI:4417868 RGD:634379 NCBI chr10:82,669,785...82,733,558
Ensembl chr10:82,669,785...82,733,546
JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 (bacterial) involved_in IDA
IBA
(MGI:3690523|PMID:17034760) BHF-UCL
GO_Central
PMID:17034760 GO_REF:0000033 MGI:3690523 NCBI chr 6:71,105,150...71,121,364
Ensembl chr 6:71,105,150...71,121,423
JBrowse link
serine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase involved_in IMP (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:30988181) MGI PMID:30988181 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013
JBrowse link
G Srr serine racemase acts_upstream_of_or_within IDA (PMID:15536068) MGI PMID:15536068 NCBI chr11:74,794,853...74,818,427
Ensembl chr11:74,797,185...74,816,774
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serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2d22 cytochrome P450, family 2, subfamily d, polypeptide 22 involved_in ISO RGD
MGI
PMID:23098818 GO_REF:0000096 MGI:4417868 RGD:11353778 NCBI chr15:82,254,728...82,264,461
Ensembl chr15:82,254,728...82,264,461
JBrowse link
G Tph2 tryptophan hydroxylase 2 acts_upstream_of_or_within IC (PMID:12584449) MGI PMID:12584449 NCBI chr10:114,914,546...115,020,927
Ensembl chr10:114,914,546...115,020,927
JBrowse link
seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position