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ONTOLOGY REPORT - ANNOTATIONS

Term:amino acid metabolic process
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Accession:GO:0006520 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
Synonyms:exact_synonym: cellular amino acid metabolic process;   cellular amino acid metabolism
 related_synonym: amino acid and derivative metabolism;   cellular amino acid and derivative metabolic process
 alt_id: GO:0006519


show annotations for term's descendants           Sort by:
amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD14A abhydrolase domain containing 14A involved_in IEA InterPro GO_REF:0000002 NCBI chr20:37,738,500...37,744,689 JBrowse link
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:45,141,870...45,159,255
Ensembl chr18:45,142,586...45,159,255 		JBrowse link
G ACY1 aminoacylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:37,732,231...37,736,986 JBrowse link
G ASL argininosuccinate lyase acts_upstream_of_or_within ISO (PMID:12559843) MGI PMID:12559843 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:7818476 RGD:1298553 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:28701731) MGI PMID:28701731 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G DDC dopa decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr18:1,802,239...1,876,714
Ensembl chr18:1,803,273...1,867,616 		JBrowse link
G DIO1 iodothyronine deiodinase 1 involved_in ISO (PMID:26305885) ARUK-UCL PMID:26305885 NCBI chr 5:55,081,894...55,098,560
Ensembl chr 5:55,082,604...55,098,529 		JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911) UniProt PMID:14754911 NCBI chr26:28,301,455...28,315,029 JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in ISO (PMID:1676842) UniProt PMID:1676842 NCBI chr26:28,316,022...28,343,928
Ensembl chr26:28,317,989...28,343,611 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:27,462,364...27,495,115
Ensembl chr16:27,462,501...27,467,492 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:14522984 GO_REF:0000002 RGD:1582383 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
G HDC histidine decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr30:16,201,222...16,223,452
Ensembl chr30:16,201,589...16,223,662 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8188247) UniProt
MGI
Ensembl		 PMID:8188247 GO_REF:0000107 GO_REF:0000117 NCBI chr33:24,066,099...24,107,827
Ensembl chr33:24,066,306...24,151,354 		JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 6:59,409,715...59,473,238
Ensembl chr 6:59,416,191...59,473,232 		JBrowse link
G LOC483859 glutamate dehydrogenase 1 pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr19:21,387,335...21,388,831 JBrowse link
G OTC ornithine transcarbamylase involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595 		JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr38:2,247,645...2,270,286
Ensembl chr38:2,250,272...2,270,653 		JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr33:24,107,754...24,151,378
Ensembl chr33:24,066,306...24,151,354 		JBrowse link
G SDS serine dehydratase involved_in IEA InterPro GO_REF:0000002 NCBI chr26:10,725,123...10,728,087 JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:46,405,890...46,464,586
Ensembl chr 9:46,415,801...46,477,524 		JBrowse link
G SLC16A2 solute carrier family 16 member 2 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:26305885) ARUK-UCL
Ensembl		 PMID:26305885 GO_REF:0000107 NCBI chr  X:57,845,865...57,859,827
Ensembl chr  X:57,845,488...57,857,518 		JBrowse link
G SRR serine racemase involved_in IEA InterPro GO_REF:0000002
G TAT tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419 		JBrowse link
G THA1 threonine aldolase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:2,909,869...2,917,921 JBrowse link
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:27,732,381...27,752,168
Ensembl chr 3:27,734,108...27,752,046 		JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000104
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr10:45,368,157...45,379,521
Ensembl chr10:45,368,178...45,379,160 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000118 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000118 NCBI chr16:25,319,035...25,375,085
Ensembl chr16:25,319,035...25,385,515 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000104 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:10,849,037...10,872,238
Ensembl chr28:10,849,046...10,871,853 		JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16906134) RGD
MGI
TreeGrafter
Ensembl
InterPro		 PMID:2040280 PMID:16906134 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2302982 NCBI chr 5:76,288,780...76,343,262
Ensembl chr 5:76,288,782...76,343,207 		JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:12,706,043...12,718,821
Ensembl chr12:12,704,983...12,718,821 		JBrowse link
G LOC480510 alanyl-tRNA editing protein Aarsd1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:20,091,116...20,102,125 JBrowse link
G PTGES3L prostaglandin E synthase 3 like involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:20,080,611...20,085,900 JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:20,920,118...20,944,251
Ensembl chr25:20,920,139...20,945,387 		JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24467666) Ensembl
MGI
TreeGrafter		 PMID:24467666 GO_REF:0000107 GO_REF:0000118 NCBI chr13:48,574,839...48,611,770
Ensembl chr13:48,572,220...48,611,775 		JBrowse link
amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000117 NCBI chr28:9,101,578...9,148,063
Ensembl chr28:9,102,282...9,147,992 		JBrowse link
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G LOC119863969 D-3-phosphoglycerate dehydrogenase involved_in IEA UniProt GO_REF:0000043
G LOC119863976 D-3-phosphoglycerate dehydrogenase involved_in IEA UniProt GO_REF:0000043
G OTC ornithine transcarbamylase involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr17:56,806,912...56,833,765 JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:360,353...364,795
Ensembl chr 9:360,376...364,570 		JBrowse link
amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:67,498,425...67,527,534
Ensembl chr 7:67,498,432...67,527,490 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:39,848,241...39,925,809
Ensembl chr30:39,848,270...39,964,823 		JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:105,612,791...105,628,125 JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422 		JBrowse link
G LOC482436 L-amino-acid oxidase-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:335,458...342,935 JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase acts_upstream_of_or_within ISO (PMID:12559843) MGI PMID:12559843 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241 		JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:45,368,157...45,379,521
Ensembl chr10:45,368,178...45,379,160 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:12470967 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:631755 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904 		JBrowse link
G GUSB glucuronidase beta involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424 		JBrowse link
G NAGS N-acetylglutamate synthase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 9:19,344,073...19,349,395
Ensembl chr 9:19,344,902...19,349,207 		JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G GUSB glucuronidase beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424 		JBrowse link
G OTC ornithine transcarbamylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595 		JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729 		JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11209059) Ensembl
MGI		 PMID:11209059 GO_REF:0000107 NCBI chr 3:57,300,422...57,326,546
Ensembl chr 3:57,300,441...57,326,486 		JBrowse link
G NOS1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332 		JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588 		JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC119868948 ornithine aminotransferase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118
G OAT ornithine aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:33,763,661...33,788,817
Ensembl chr28:33,758,473...33,788,759 		JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15753084 GO_REF:0000118 RGD:8693655 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305 		JBrowse link
G ARG2 arginase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15753084 GO_REF:0000118 RGD:8693655 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402 		JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC119868948 ornithine aminotransferase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118
G OAT ornithine aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:33,763,661...33,788,817
Ensembl chr28:33,758,473...33,788,759 		JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:81,980,959...81,990,377
Ensembl chr 2:81,981,376...81,989,916 		JBrowse link
G ARG1 arginase 1 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:4062872 GO_REF:0000002 GO_REF:0000043 RGD:2300098 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305 		JBrowse link
G ARG2 arginase 2 involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:16537391 GO_REF:0000002 GO_REF:0000043 RGD:1582129 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402 		JBrowse link
G ASL argininosuccinate lyase involved_in ISO (PMID:9045711) UniProt PMID:9045711 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:17322279 GO_REF:0000118 RGD:1625578 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729 		JBrowse link
G DDAH2 DDAH family member 2, ADMA-independent involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:1,206,180...1,209,459
Ensembl chr12:1,206,309...1,208,389 		JBrowse link
G SLC39A8 solute carrier family 39 member 8 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5912781|PMID:28481222) UniProt
Ensembl		 PMID:28481222 GO_REF:0000107 MGI:5912781 NCBI chr32:23,727,920...23,801,459
Ensembl chr32:23,729,476...23,800,941 		JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase ISO RGD PMID:4062872 PMID:8586639 RGD:1599287 RGD:2300098 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:4062872 GO_REF:0000107 GO_REF:0000118 RGD:2300098 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904 		JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DALRD3 DALR anticodon binding domain containing 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:40,145,239...40,148,731
Ensembl chr20:40,145,700...40,148,729
Ensembl chr20:40,145,700...40,148,729 		JBrowse link
G RARS1 arginyl-tRNA synthetase 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro		 PMID:7082655 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2303394 NCBI chr 4:43,237,499...43,260,738
Ensembl chr 4:43,237,499...43,260,677 		JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:46,993,787...47,047,295
Ensembl chr12:46,992,959...47,047,240 		JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAT tyrosine aminotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419 		JBrowse link
aromatic amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:57,300,422...57,326,546
Ensembl chr 3:57,300,441...57,326,486 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:50,133,496...50,143,487
Ensembl chr 8:50,133,714...50,143,439 		JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr26:7,430,891...7,440,643
Ensembl chr26:7,430,933...7,440,611 		JBrowse link
G HPDL 4-hydroxyphenylpyruvate dioxygenase like involved_in IEA InterPro GO_REF:0000002 NCBI chr15:15,019,273...15,028,932
Ensembl chr15:15,027,472...15,028,671 		JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:41,590,253...41,670,156
Ensembl chr15:41,592,876...41,670,837 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:40,545,379...40,571,620
Ensembl chr21:40,547,682...40,566,572 		JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:13,442,611...13,526,537
Ensembl chr10:13,442,611...13,527,243 		JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:2573597) RGD
TreeGrafter
UniProt
InterPro
MGI		 PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 RGD:2316002 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054 		JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr37:426,366...430,668
Ensembl chr37:426,367...439,619 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:12753071 MGI
TreeGrafter
Ensembl		 PMID:12753071 GO_REF:0000107 GO_REF:0000118 RGD:1299508 NCBI chr18:54,215,920...54,238,094
Ensembl chr18:54,216,926...54,238,059 		JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:54,187,487...54,191,493
Ensembl chr18:54,187,487...54,191,482 		JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr 8:71,747,319...71,764,570
Ensembl chr 8:71,753,164...71,765,349 		JBrowse link
G NIT2 nitrilase family member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:6,944,340...6,960,540
Ensembl chr33:6,944,374...6,959,074 		JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAB2 GRB2 associated binding protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:20,414,903...20,605,807
Ensembl chr21:20,277,507...20,606,736 		JBrowse link
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:18,320,941...18,338,185
Ensembl chr 1:18,321,021...18,337,430 		JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr21:20,277,707...20,413,624
Ensembl chr21:20,277,507...20,606,736 		JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
MGI
TreeGrafter		 PMID:4193185 GO_REF:0000107 GO_REF:0000118 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:27,462,364...27,495,115
Ensembl chr16:27,462,501...27,467,492 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
Ensembl chr12:67,081,329...67,104,397 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
aspartate family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:71,747,319...71,764,570
Ensembl chr 8:71,753,164...71,765,349 		JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479 		JBrowse link
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chr 7:35,440,250...35,477,470
Ensembl chr 7:35,440,676...35,476,795 		JBrowse link
G ASPA aspartoacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:47,338,435...47,361,974
Ensembl chr 9:47,343,120...47,360,914 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904 		JBrowse link
G DDO D-aspartate oxidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16525061) Ensembl
MGI		 PMID:16525061 GO_REF:0000107 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
Ensembl chr12:67,081,329...67,104,397 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2837211 RGD:2289377 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:12686151 RGD:2289396 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
G NAT8L N-acetyltransferase 8 like involved_in ISO (PMID:28077719) MGI PMID:28077719 NCBI chr 3:62,107,060...62,113,807
Ensembl chr 3:62,108,003...62,113,737 		JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS1 aspartyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr19:38,690,170...38,751,360
Ensembl chr19:38,668,527...38,751,310 		JBrowse link
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:25,378,705...25,406,975
Ensembl chr 7:25,378,705...25,406,947 		JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923 		JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr 8:47,280,872...47,304,460
Ensembl chr 8:47,282,235...47,304,283 		JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24467666) Ensembl
MGI		 PMID:24467666 GO_REF:0000107 NCBI chr13:48,574,839...48,611,770
Ensembl chr13:48,572,220...48,611,775 		JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chr13:5,583,795...5,659,355
Ensembl chr13:5,583,801...5,659,463 		JBrowse link
G UPB1 beta-ureidopropionase 1 ISO RGD PMID:7626590 RGD:1624989 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (PMID:14755340) MGI PMID:14755340 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14755340) RGD
MGI
Ensembl		 PMID:11733007 PMID:14755340 GO_REF:0000107 RGD:1582175 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:112,579,345...112,599,163 JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:41,009,798...41,224,802
Ensembl chr12:41,009,730...41,224,802 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr 6:17,128,615...17,132,925
Ensembl chr 6:17,128,824...17,133,585 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791 		JBrowse link
G DBT dihydrolipoamide branched chain transacylase E2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,753,233...49,805,493
Ensembl chr 6:49,753,323...49,805,882 		JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479 		JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr14:40,672,294...40,780,608
Ensembl chr14:40,673,008...40,780,516 		JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr37:841,385...943,972
Ensembl chr37:841,414...943,941 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr30:7,584,122...7,594,599
Ensembl chr30:7,584,086...7,594,150 		JBrowse link
G PPM1K protein phosphatase, Mg2+/Mn2+ dependent 1K involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,599,758...11,624,777
Ensembl chr32:11,597,814...11,623,390 		JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:41,630,868...41,665,894
Ensembl chr 7:41,630,098...41,665,791 		JBrowse link
G TMEM91 transmembrane protein 91 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:112,610,660...112,615,813 JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20237068) InterPro
MGI
Ensembl		 PMID:20237068 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNS1 carnosine synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20097752), (PMID:24891507) MGI
TreeGrafter
Ensembl
InterPro		 PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr18:50,041,545...50,050,438
Ensembl chr18:50,042,465...50,050,949 		JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNMT1 carnosine N-methyltransferase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:83,188,622...83,229,942
Ensembl chr 1:83,188,747...83,227,488 		JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,101,578...9,148,063
Ensembl chr28:9,102,282...9,147,992 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7053379 GO_REF:0000118 RGD:10755426 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635 		JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:9472964 GO_REF:0000107 GO_REF:0000118 RGD:4144071 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595 		JBrowse link
G TRIM54 tripartite motif containing 54 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:21,257,660...21,278,410
Ensembl chr17:21,257,706...21,278,274 		JBrowse link
citrulline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904 		JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729 		JBrowse link
G DDAH2 DDAH family member 2, ADMA-independent NOT|involved_in ISO
IEA		 (PMID:21493890), (PMID:37296100) UniProt
TreeGrafter		 PMID:21493890 PMID:37296100 GO_REF:0000118 NCBI chr12:1,206,180...1,209,459
Ensembl chr12:1,206,309...1,208,389 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:17213233) MGI PMID:17213233 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030387) UniProt
MGI
Ensembl		 PMID:15030387 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 6:75,324,328...75,348,476
Ensembl chr 6:75,324,787...75,349,451 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,301,455...28,315,029 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr31:37,230,900...37,247,170 JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr31:37,230,900...37,247,170 JBrowse link
G CTH cystathionine gamma-lyase involved_in ISO (PMID:19428278) BHF-UCL PMID:19428278 NCBI chr 6:75,324,328...75,348,476
Ensembl chr 6:75,324,787...75,349,451 		JBrowse link
cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr31:37,230,900...37,247,170 JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,999,815...21,047,779
Ensembl chr12:21,000,792...21,047,779 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12384496) Ensembl
MGI		 PMID:12384496 GO_REF:0000107 NCBI chr 6:55,204,602...55,244,217 JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARS1 cysteinyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr18:46,959,743...47,007,521
Ensembl chr18:46,959,743...47,007,460 		JBrowse link
G CARS2 cysteinyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr22:58,891,826...58,946,112
Ensembl chr22:58,902,293...58,947,558 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
G DDO D-aspartate oxidase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
Ensembl chr12:67,081,329...67,104,397 		JBrowse link
D-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA InterPro GO_REF:0000002 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
G DDO D-aspartate oxidase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
Ensembl chr12:67,081,329...67,104,397 		JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SGSM2 small G protein signaling modulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:46,405,890...46,464,586
Ensembl chr 9:46,415,801...46,477,524 		JBrowse link
G SRR serine racemase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237) TreeGrafter
MGI		 PMID:10557334 PMID:11054547 PMID:12021263 PMID:15710237 GO_REF:0000118
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
G SRR serine racemase involved_in ISO (PMID:20106978) UniProt PMID:20106978 RGD:8554326
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TH tyrosine hydroxylase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:7592982), (PMID:7715703)
(PMID:9520487)		 RGD
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:19584816 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1580046 RGD:5130972 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:19540876 RGD:9588538 NCBI chr 6:33,385,779...33,471,348
Ensembl chr 6:33,376,996...33,471,326 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 involved_in ISO (MGI:5697738|PMID:26430123) UniProt PMID:26430123 MGI:5697738 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in ISO
IBA
IEA
ISS		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:17712632 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 RGD:6480258 NCBI chr36:15,351,289...15,391,701
Ensembl chr36:15,349,683...15,391,824 		JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:22108820 GO_REF:0000033 GO_REF:0000118 RGD:401900601 NCBI chr 2:7,365,708...7,450,893
Ensembl chr 2:7,365,283...7,450,893 		JBrowse link
G LOC483960 glutamate decarboxylase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:15,982,071...16,004,623 JBrowse link
G SLC1A3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15305132) Ensembl
MGI		 PMID:15305132 GO_REF:0000107 NCBI chr 4:71,936,128...72,014,119
Ensembl chr 4:71,936,126...72,014,173 		JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:8,110,327...8,179,394
Ensembl chr27:8,130,823...8,174,936 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:33,385,779...33,471,348
Ensembl chr 6:33,376,996...33,471,326 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11544478), (PMID:15262267) InterPro
MGI
TreeGrafter
Ensembl
UniProt		 PMID:11544478 PMID:15262267 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr35:22,560,005...22,590,996
Ensembl chr35:22,560,008...22,587,875 		JBrowse link
gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:33,385,779...33,471,348
Ensembl chr 6:33,376,996...33,471,326 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12067239), (PMID:16504488), (PMID:16647690) Ensembl
MGI		 PMID:12067239 PMID:16504488 PMID:16647690 GO_REF:0000107 NCBI chr35:22,560,005...22,590,996
Ensembl chr35:22,560,008...22,587,875 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr37:1,433,640...1,508,347
Ensembl chr37:1,433,398...1,508,146 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:722,105...737,857
Ensembl chr10:722,202...737,753 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr36:16,185,011...16,391,080
Ensembl chr36:16,185,649...16,483,016 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr36:15,351,289...15,391,701
Ensembl chr36:15,349,683...15,391,824 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G LOC483859 glutamate dehydrogenase 1 pseudogene involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:21,387,335...21,388,831 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:4193185) RGD
MGI
Ensembl		 PMID:4193185 PMID:16489927 GO_REF:0000107 RGD:13504861 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD
MGI		 PMID:4193185 PMID:16489927 RGD:13504861 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
MGI		 PMID:4193185 GO_REF:0000107 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:16,019,183...16,054,060
Ensembl chr29:16,019,246...16,050,535 		JBrowse link
G VXN vexin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:16,078,154...16,101,873
Ensembl chr29:16,078,658...16,099,606 		JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD2 glutamate decarboxylase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:8999827 GO_REF:0000033 GO_REF:0000118 RGD:1625237 NCBI chr 2:7,365,708...7,450,893
Ensembl chr 2:7,365,283...7,450,893 		JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:20,920,118...20,944,251
Ensembl chr25:20,920,139...20,945,387 		JBrowse link
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,101,578...9,148,063
Ensembl chr28:9,102,282...9,147,992 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17854388) Ensembl
MGI		 PMID:17854388 GO_REF:0000107 NCBI chr35:22,560,005...22,590,996
Ensembl chr35:22,560,008...22,587,875 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:28701731) MGI PMID:28701731 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G DGLUCY D-glutamate cyclase involved_in ISO (MGI:5901965|PMID:28266638) UniProt PMID:28266638 MGI:5901965 NCBI chr 8:62,052,747...62,086,097 JBrowse link
G FPGS folylpolyglutamate synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,590,092...55,612,639
Ensembl chr 9:55,585,970...55,599,028 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,999,815...21,047,779
Ensembl chr12:21,000,792...21,047,779 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:55,204,602...55,244,217 JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:21447318), (PMID:24047895) UniProt PMID:21447318 PMID:24047895 NCBI chr26:28,301,455...28,315,029 JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:4403443 RGD:2301548 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241 		JBrowse link
G MTHFS methenyltetrahydrofolate synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,480,935...57,514,836 JBrowse link
G NAGS N-acetylglutamate synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12049647) Ensembl
MGI
TreeGrafter		 PMID:12049647 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:19,344,073...19,349,395
Ensembl chr 9:19,344,902...19,349,207 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419 		JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
InterPro		 PMID:28323 PMID:4403443 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 RGD:2301547 RGD:2301548 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241 		JBrowse link
G LGSN lengsin, lens protein with glutamine synthetase domain involved_in
NOT|involved_in		 IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr12:26,852,832...26,884,307
Ensembl chr12:26,852,851...26,919,138 		JBrowse link
G LOC612295 glutamine synthetase-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr  X:32,579,014...32,580,179 JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16641247) Ensembl
MGI
TreeGrafter		 PMID:16641247 GO_REF:0000107 GO_REF:0000118 NCBI chr37:1,433,640...1,508,347
Ensembl chr37:1,433,398...1,508,146 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:722,105...737,857
Ensembl chr10:722,202...737,753 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780 		JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:12522136 RGD:5135508 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479 		JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000043 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054 		JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr37:426,366...430,668
Ensembl chr37:426,367...439,619 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:28701731) MGI PMID:28701731 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:2474281 PMID:2803258 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:10755425 RGD:5132588 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697 		JBrowse link
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:2,067,767...2,093,014
Ensembl chr15:2,067,763...2,093,014 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr  X:12,759,998...12,867,707
Ensembl chr  X:12,760,015...12,865,111 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007 		JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:1,378,275...1,419,643
Ensembl chr11:1,378,336...1,419,653 		JBrowse link
G GGH gamma-glutamyl hydrolase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr29:13,143,881...13,165,028
Ensembl chr29:13,134,232...13,165,028 		JBrowse link
G GLS glutaminase involved_in IEA InterPro GO_REF:0000002 NCBI chr37:1,433,640...1,508,347
Ensembl chr37:1,433,398...1,508,146 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:722,105...737,857
Ensembl chr10:722,202...737,753 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (MGI:5499916|PMID:23663782) UniProt PMID:23663782 MGI:5499916 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GMPS guanine monophosphate synthase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr23:49,569,571...49,645,999
Ensembl chr23:49,569,531...49,699,199 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17237885) Ensembl
MGI		 PMID:17237885 GO_REF:0000107 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl GO_REF:0000107
G NIT2 nitrilase family member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:6,944,340...6,960,540
Ensembl chr33:6,944,374...6,959,074 		JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO
IEA		 RGD
UniProt		 PMID:3436958 GO_REF:0000043 GO_REF:0000104 RGD:1599004 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,228,831...16,244,104
Ensembl chr26:16,234,710...16,240,012 		JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in ISO PMID:10660562 UniProt PMID:10660562 RGD:68922 NCBI chr27:8,110,327...8,179,394
Ensembl chr27:8,130,823...8,174,936 		JBrowse link
G TRIM54 tripartite motif containing 54 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr17:21,257,660...21,278,410
Ensembl chr17:21,257,706...21,278,274 		JBrowse link
G UCP2 uncoupling protein 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr21:24,304,410...24,311,392
Ensembl chr21:24,304,457...24,311,128 		JBrowse link
glutaminyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:40,544,031...40,619,268
Ensembl chr 2:40,544,210...40,635,281 		JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:40,077,856...40,085,100
Ensembl chr20:40,078,163...40,085,099 		JBrowse link
glutaminyl-tRNAGln biosynthesis via transamidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATB glutamyl-tRNA amidotransferase subunit B involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr15:49,602,453...49,698,593
Ensembl chr15:49,603,559...49,698,535 		JBrowse link
G GATC glutamyl-tRNA amidotransferase subunit C involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr26:16,352,826...16,362,298 JBrowse link
G QRSL1 glutaminyl-tRNA amidotransferase subunit QRSL1 involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr12:63,972,423...64,003,506 JBrowse link
glutamyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:22,276,189...22,299,865
Ensembl chr 6:22,276,230...22,297,428 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr38:14,754,628...14,823,626
Ensembl chr38:14,754,632...14,823,621 		JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305 		JBrowse link
G THA1 threonine aldolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:2,909,869...2,917,921 JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO
IEA		 in the presence of tetrahydrofolate RGD
TreeGrafter
InterPro		 PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA		 in the presence of tetrahydrofolate RGD
TreeGrafter
InterPro		 PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305 		JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:12383475 GO_REF:0000107 GO_REF:0000118 RGD:1599457 NCBI chr25:50,968,291...50,976,089 JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:73,292,117...73,327,769
Ensembl chr 4:73,292,101...73,327,962 		JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr20:39,815,449...39,820,907
Ensembl chr20:39,815,814...39,820,506 		JBrowse link
G GLDC glycine decarboxylase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:27,491,639...27,584,450
Ensembl chr11:27,414,834...27,584,450 		JBrowse link
G LOC485342 aminomethyltransferase, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr21:30,103,868...30,112,394 JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in ISS UniProt GO_REF:0000024 NCBI chr20:39,815,449...39,820,907
Ensembl chr20:39,815,814...39,820,506 		JBrowse link
G GCSH glycine cleavage system protein H involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:6402507 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:1598699 NCBI chr 5:70,745,591...70,757,292
Ensembl chr 5:70,745,258...70,756,830 		JBrowse link
G GLDC glycine decarboxylase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:6778858 GO_REF:0000118 RGD:1642728 NCBI chr11:27,491,639...27,584,450
Ensembl chr11:27,414,834...27,584,450 		JBrowse link
glycine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:58,102,057...58,116,750
Ensembl chr11:58,102,592...58,109,389 		JBrowse link
G FPGS folylpolyglutamate synthase involved_in ISO (PMID:10964921) UniProt PMID:10964921 NCBI chr 9:55,590,092...55,612,639
Ensembl chr 9:55,585,970...55,599,028 		JBrowse link
G GLYAT glycine-N-acyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:37,689,076...37,715,614
Ensembl chr18:37,656,675...37,715,063 		JBrowse link
G GNMT glycine N-methyltransferase involved_in ISO PMID:10756111 RGD
CAFA		 PMID:10756111 PMID:18501206 RGD:12793006 RGD:7242952 NCBI chr12:11,500,363...11,503,075
Ensembl chr12:11,500,392...11,503,481 		JBrowse link
G LOC483462 glycine N-phenylacetyltransferase-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:37,626,488...37,676,184
Ensembl chr18:37,656,675...37,715,063 		JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 ISO RGD PMID:4078017 RGD:2301990 NCBI chr31:29,032,399...29,063,706 JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:30988181) MGI PMID:30988181 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:24698160) RGD
UniProt		 PMID:15671219 PMID:24698160 RGD:1359815 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:10457370 PMID:15671219 GO_REF:0000107 RGD:1359815 RGD:2300380 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305 		JBrowse link
glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GARS1 glycyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19470612) Ensembl
MGI
InterPro		 PMID:19470612 GO_REF:0000002 GO_REF:0000107 NCBI chr14:43,308,274...43,351,999
Ensembl chr14:43,308,152...43,396,487 		JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 NCBI chr15:35,741,190...35,761,848
Ensembl chr15:35,692,161...35,760,978 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr31:39,451,557...39,464,249
Ensembl chr31:39,275,159...39,464,715 		JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr15:35,767,314...35,791,086
Ensembl chr15:35,759,672...35,791,003 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr20:676,624...717,109
Ensembl chr20:678,073...717,141 		JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr15:35,741,190...35,761,848
Ensembl chr15:35,692,161...35,760,978 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr31:39,451,557...39,464,249
Ensembl chr31:39,275,159...39,464,715 		JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr15:35,767,314...35,791,086
Ensembl chr15:35,759,672...35,791,003 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr20:676,624...717,109
Ensembl chr20:678,073...717,141 		JBrowse link
histidyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HARS1 histidyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 2:35,828,243...35,843,615
Ensembl chr 2:35,828,260...35,843,583 		JBrowse link
G HARS2 histidyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:35,843,611...35,851,257
Ensembl chr 2:35,843,706...35,850,760 		JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLMH bleomycin hydrolase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:44,271,662...44,319,814
Ensembl chr 9:44,272,385...44,319,769 		JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:6,068,572...6,119,580
Ensembl chr34:6,070,046...6,098,312 		JBrowse link
homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10953023), (PMID:10993757), (PMID:15131763), (PMID:15555590), (PMID:15622513), (PMID:15916860), (PMID:16226235), (PMID:18541157), (PMID:7878023) Ensembl
MGI		 PMID:7878023 PMID:10953023 PMID:10993757 PMID:15131763 PMID:15555590 More... GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697 		JBrowse link
G DPEP1 dipeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,909,034...63,923,309
Ensembl chr 5:63,909,042...63,923,492 		JBrowse link
G MMUT methylmalonyl-CoA mutase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,306,074...17,339,921
Ensembl chr12:17,307,522...17,339,897 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in ISO
IEA		 RGD
Ensembl		 PMID:18726220 GO_REF:0000107 RGD:2317121 NCBI chr 2:84,445,526...84,457,435
Ensembl chr 2:84,380,919...84,536,818 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11730351 PMID:21121936 GO_REF:0000118 RGD:1601423 RGD:7207080 NCBI chr 4:3,219,851...3,328,000
Ensembl chr 4:3,215,090...3,328,115 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr34:6,068,572...6,119,580
Ensembl chr34:6,070,046...6,098,312 		JBrowse link
G NOX4 NADPH oxidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:10,615,153...10,782,927
Ensembl chr21:10,615,970...10,775,277 		JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,290,183...41,382,917
Ensembl chr23:41,290,567...41,382,807 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:8,664,135...8,671,637
Ensembl chr 6:8,664,358...8,671,620 		JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:47,013,033...47,021,511
Ensembl chr20:47,012,557...47,021,778 		JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,725,123...10,728,087 JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,731,972...10,759,768
Ensembl chr26:10,743,947...10,759,777 		JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:32,563,697...32,604,006
Ensembl chr28:32,563,671...32,601,063 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17767905) RGD
MGI
Ensembl		 PMID:11733007 PMID:17767905 GO_REF:0000107 RGD:1582175 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 6:17,128,615...17,132,925
Ensembl chr 6:17,128,824...17,133,585 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,165,272...45,167,683
Ensembl chr  X:45,165,272...45,167,574 		JBrowse link
isoleucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14755340) Ensembl
MGI		 PMID:14755340 GO_REF:0000107 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
isoleucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IARS1 isoleucyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8052601) MGI
TreeGrafter
Ensembl
InterPro		 PMID:8052601 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:99,045,023...99,113,865
Ensembl chr 1:99,045,102...99,113,620 		JBrowse link
G IARS2 isoleucyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr38:14,864,004...14,925,684
Ensembl chr38:14,863,998...14,925,635 		JBrowse link
kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:20,920,118...20,944,251
Ensembl chr25:20,920,139...20,945,387 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541 		JBrowse link
G KYAT1 kynurenine aminotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,760,212...54,796,996
Ensembl chr 9:54,760,276...54,796,848 		JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 6:59,409,715...59,473,238
Ensembl chr 6:59,416,191...59,473,232 		JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:50,968,291...50,976,089 JBrowse link
G GPT glutamic--pyruvic transaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:37,923,757...37,927,843
Ensembl chr13:37,924,422...37,926,156 		JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr15:8,238,295...8,250,789 JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:73,292,117...73,327,769
Ensembl chr 4:73,292,101...73,327,962 		JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPT2 glutamic--pyruvic transaminase 2 involved_in ISO (PMID:11863375) UniProt PMID:11863375 NCBI chr15:8,238,295...8,250,789 JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054 		JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993 		JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:50,968,291...50,976,089 JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G CDO1 cysteine dioxygenase type 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16611641 GO_REF:0000118 RGD:2301357 NCBI chr11:5,512,996...5,524,556
Ensembl chr11:5,371,378...5,524,562 		JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr27:2,005,482...2,036,703
Ensembl chr27:2,005,355...2,036,228 		JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr27:2,005,482...2,036,703
Ensembl chr27:2,005,355...2,036,228 		JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYAT3 kynurenine aminotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:59,409,715...59,473,238
Ensembl chr 6:59,416,191...59,473,232 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000041 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
L-kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA GOC GO_REF:0000108 NCBI chr25:20,920,118...20,944,251
Ensembl chr25:20,920,139...20,945,387 		JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:23690293 RGD:13513904 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541 		JBrowse link
G KYAT1 kynurenine aminotransferase 1 involved_in ISO
IEA		 RGD
GOC		 PMID:7796908 GO_REF:0000108 RGD:9685040 NCBI chr 9:54,760,212...54,796,996
Ensembl chr 9:54,760,276...54,796,848 		JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11733007 GO_REF:0000118 RGD:1582175 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD9 acyl-CoA dehydrogenase family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:3,155,754...3,205,307
Ensembl chr20:3,021,167...3,205,279 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr37:18,028,244...18,073,975
Ensembl chr37:18,017,087...18,073,862 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 6:17,128,615...17,132,925
Ensembl chr 6:17,128,824...17,133,585 		JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:75,688,736...75,703,095
Ensembl chr 2:75,688,827...75,702,965 		JBrowse link
G HMGCLL1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:22,748,798...22,953,849
Ensembl chr12:22,701,085...22,954,133 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr30:7,584,122...7,594,599
Ensembl chr30:7,584,086...7,594,150 		JBrowse link
G KNSTRN kinetochore localized astrin (SPAG5) binding protein involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr30:7,562,738...7,573,514
Ensembl chr30:7,562,807...7,572,950 		JBrowse link
G MCCC2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 2:54,751,703...54,825,133
Ensembl chr 2:54,751,698...54,823,273 		JBrowse link
L-leucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17767905)
(PMID:14755340)		 Ensembl
MGI		 PMID:14755340 PMID:17767905 GO_REF:0000107 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
G DAO D-amino acid oxidase acts_upstream_of_or_within ISO (PMID:15026304) MGI PMID:15026304 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567240) Ensembl
MGI		 PMID:10567240 GO_REF:0000107 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:43,200,343...43,212,288
Ensembl chr 9:43,200,371...43,212,288 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:48,003,730...48,025,001
Ensembl chr 8:48,002,211...48,024,999 		JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:27,732,381...27,752,168
Ensembl chr 3:27,734,108...27,752,046 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:27,775,779...27,804,603
Ensembl chr 3:27,776,084...27,789,960 		JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr17:2,087,107...2,095,576 JBrowse link
G APIP APAF1 interacting protein involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr18:33,012,049...33,033,453
Ensembl chr18:33,011,121...33,033,435 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr32:6,408,778...6,451,606
Ensembl chr32:6,407,460...6,450,790 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr20:48,648,987...48,658,231
Ensembl chr20:48,653,152...48,658,160 		JBrowse link
G MTAP methylthioadenosine phosphorylase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr11:41,148,389...41,200,635
Ensembl chr11:41,148,404...41,264,504 		JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000104 NCBI chr18:33,012,049...33,033,453
Ensembl chr18:33,011,121...33,033,435 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr32:6,408,778...6,451,606
Ensembl chr32:6,407,460...6,450,790 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr20:48,648,987...48,658,231
Ensembl chr20:48,653,152...48,658,160 		JBrowse link
L-phenylalanine biosynthetic process from chorismate via phenylpyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 3:57,300,422...57,326,546
Ensembl chr 3:57,300,441...57,326,486 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 8:50,133,496...50,143,487
Ensembl chr 8:50,133,714...50,143,439 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr33:24,066,099...24,107,827
Ensembl chr33:24,066,306...24,151,354 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422 		JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 NCBI chr15:41,590,253...41,670,156
Ensembl chr15:41,592,876...41,670,837 		JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:4155291 GO_REF:0000118 RGD:5128604 NCBI chr 3:62,970,850...62,987,512
Ensembl chr 3:62,970,121...63,028,395 		JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr33:24,107,754...24,151,378
Ensembl chr33:24,066,306...24,151,354 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419 		JBrowse link
L-phenylalanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase ISO RGD PMID:16953590 RGD:1601531 NCBI chr15:41,590,253...41,670,156
Ensembl chr15:41,592,876...41,670,837 		JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in ISO PMID:1465414 CAFA PMID:1465414 RGD:12792994 NCBI chr 4:21,719,863...21,723,493
Ensembl chr 4:21,719,863...21,721,574 		JBrowse link
G SPR sepiapterin reductase acts_upstream_of_or_within ISO (PMID:16532389) MGI PMID:16532389 NCBI chr17:49,950,192...49,957,455
Ensembl chr17:49,950,800...49,957,417 		JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr28:9,101,578...9,148,063
Ensembl chr28:9,102,282...9,147,992 		JBrowse link
G LOC119868948 ornithine aminotransferase, mitochondrial involved_in IEA UniProt GO_REF:0000041
G NOXRED1 NADP dependent oxidoreductase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:50,203,260...50,228,944
Ensembl chr 8:50,203,261...50,233,922 		JBrowse link
G OAT ornithine aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr28:33,763,661...33,788,817
Ensembl chr28:33,758,473...33,788,759 		JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 9:360,353...364,795
Ensembl chr 9:360,376...364,570 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 7:38,902,705...38,905,924 JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr13:37,259,139...37,264,337
Ensembl chr13:37,259,139...37,264,337 		JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC119863969 D-3-phosphoglycerate dehydrogenase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043
G LOC119863976 D-3-phosphoglycerate dehydrogenase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043
G LOC119877177 D-3-phosphoglycerate dehydrogenase-like involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043
G LOC119877194 D-3-phosphoglycerate dehydrogenase-like involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043
G PHGDH phosphoglycerate dehydrogenase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:56,806,912...56,833,765 JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:80,376,469...80,408,177
Ensembl chr 1:80,377,115...80,408,162 		JBrowse link
G PSPH phosphoserine phosphatase involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:493,152...546,176
Ensembl chr 6:493,176...512,089 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:10457370 RGD:2300380 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305 		JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G SDS serine dehydratase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:10,725,123...10,728,087 JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,731,972...10,759,768
Ensembl chr26:10,743,947...10,759,777 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305 		JBrowse link
L-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:50,968,291...50,976,089 JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:80,376,469...80,408,177
Ensembl chr 1:80,377,115...80,408,162 		JBrowse link
G PSPH phosphoserine phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:493,152...546,176
Ensembl chr 6:493,176...512,089 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:24698160) UniProt PMID:24698160 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305 		JBrowse link
G SRR serine racemase involved_in
acts_upstream_of_or_within		 ISO PMID:20106978
(PMID:10557334), (PMID:12021263), (PMID:15710237), (PMID:16517698)
(PMID:11054547), (PMID:15193426), (PMID:20106978)		 UniProt
MGI		 PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 More... RGD:8554326
leucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:40,544,031...40,619,268
Ensembl chr 2:40,544,210...40,635,281 		JBrowse link
G LARS2 leucyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:42,891,823...43,080,987
Ensembl chr20:42,892,801...43,081,197 		JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:26,172,888...26,193,639
Ensembl chr 5:26,169,716...26,193,952 		JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
lysine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
lysyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:25,378,705...25,406,975
Ensembl chr 7:25,378,705...25,406,947 		JBrowse link
G KARS1 lysyl-tRNA synthetase 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro		 PMID:7082655 PMID:7372681 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2303393 RGD:2303394 NCBI chr 5:75,172,976...75,188,197
Ensembl chr 5:75,173,032...75,188,197 		JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMACR alpha-methylacyl-CoA racemase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:73,815,438...73,836,016
Ensembl chr 4:73,815,291...73,867,437 		JBrowse link
G DCT dopachrome tautomerase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:45,271,709...45,305,272
Ensembl chr22:45,271,709...45,305,346 		JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:32,361,825...32,713,631
Ensembl chr 3:32,361,517...32,713,572 		JBrowse link
G SLC45A2 solute carrier family 45 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:73,838,684...73,868,222
Ensembl chr 4:73,815,291...73,867,437 		JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:2,087,107...2,095,576 JBrowse link
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr18:33,012,049...33,033,453
Ensembl chr18:33,011,121...33,033,435 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15217352) RGD
MGI
InterPro		 PMID:15217352 PMID:15845641 GO_REF:0000002 RGD:1359026 NCBI chr 3:27,732,381...27,752,168
Ensembl chr 3:27,734,108...27,752,046 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:27,775,779...27,804,603
Ensembl chr 3:27,776,084...27,789,960 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr32:6,408,778...6,451,606
Ensembl chr32:6,407,460...6,450,790 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:48,648,987...48,658,231
Ensembl chr20:48,653,152...48,658,160 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:25633902) BHF-UCL PMID:25633902 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15217352) TreeGrafter
MGI		 PMID:15217352 GO_REF:0000118 NCBI chr 2:84,445,526...84,457,435
Ensembl chr 2:84,380,919...84,536,818 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11158293) RGD
TreeGrafter
MGI
Ensembl
InterPro
UniProt		 PMID:11158293 PMID:11730351 PMID:15845641 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:1359026 RGD:1601423 NCBI chr 4:3,219,851...3,328,000
Ensembl chr 4:3,215,090...3,328,115 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr34:6,068,572...6,119,580
Ensembl chr34:6,070,046...6,098,312 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in ISO (PMID:10677294) UniProt PMID:10677294 NCBI chr 4:29,450,857...29,467,251
Ensembl chr 4:29,452,601...29,466,929 		JBrowse link
methionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:2,087,107...2,095,576 JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17937387) Ensembl
MGI		 PMID:17937387 GO_REF:0000107 NCBI chr12:11,500,363...11,503,075
Ensembl chr12:11,500,392...11,503,481 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:84,445,526...84,457,435
Ensembl chr 2:84,380,919...84,536,818 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:21121936 RGD:7207080 NCBI chr 4:3,219,851...3,328,000
Ensembl chr 4:3,215,090...3,328,115 		JBrowse link
methionyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARS1 methionyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:1,588,503...1,606,752
Ensembl chr10:1,588,875...1,606,750 		JBrowse link
G MARS2 methionyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr37:7,149,375...7,155,318
Ensembl chr37:7,149,418...7,152,418 		JBrowse link
mitochondrial alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,706,043...12,718,821
Ensembl chr12:12,704,983...12,718,821 		JBrowse link
mitochondrial asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,378,705...25,406,975
Ensembl chr 7:25,378,705...25,406,947 		JBrowse link
mitochondrial glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GARS1 glycyl-tRNA synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:43,308,274...43,351,999
Ensembl chr14:43,308,152...43,396,487 		JBrowse link
mitochondrial seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARS1 seryl-tRNA synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:42,584,792...42,605,201
Ensembl chr 6:42,584,798...42,605,136 		JBrowse link
G SARS2 seryl-tRNA synthetase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:114,192,574...114,202,385 JBrowse link
mitochondrial tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WARS2 tryptophanyl tRNA synthetase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:56,229,175...56,322,688
Ensembl chr17:56,229,769...56,322,638 		JBrowse link
mitochondrial tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YARS2 tyrosyl-tRNA synthetase 2 involved_in ISO (PMID:20598274) BHF-UCL PMID:20598274 NCBI chr27:16,139,462...16,162,701
Ensembl chr27:16,139,499...16,161,147 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in ISO PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr 4:73,292,117...73,327,769
Ensembl chr 4:73,292,101...73,327,962 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:321,246...420,262
Ensembl chr38:366,656...416,952 		JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:321,246...420,262
Ensembl chr38:366,656...416,952 		JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATCAY ATCAY kinesin light chain interacting caytaxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,610,124...55,641,879
Ensembl chr20:55,612,260...55,641,832 		JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAZ1 ornithine decarboxylase antizyme 1 ISO RGD PMID:8166639 RGD:401851045 NCBI chr20:56,769,317...56,770,921
Ensembl chr20:56,769,319...56,770,930 		JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,101,578...9,148,063
Ensembl chr28:9,102,282...9,147,992 		JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTC ornithine transcarbamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595 		JBrowse link
ornithine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZIN2 antizyme inhibitor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16916800) Ensembl
MGI		 PMID:16916800 GO_REF:0000107 NCBI chr 2:68,288,554...68,323,710
Ensembl chr 2:68,286,195...68,323,710 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916 		JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA		 RGD
GOC		 PMID:4062872 GO_REF:0000108 RGD:2300098 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595 		JBrowse link
G SLC25A2 solute carrier family 25 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:36,286,080...36,287,619
Ensembl chr 2:36,286,584...36,287,489 		JBrowse link
phenylalanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr35:5,389,694...5,887,911
Ensembl chr35:5,460,664...5,948,574 		JBrowse link
G FARSA phenylalanyl-tRNA synthetase subunit alpha involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:49,258,827...49,267,279
Ensembl chr20:49,258,845...49,267,198 		JBrowse link
G FARSB phenylalanyl-tRNA synthetase subunit beta involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000117 GO_REF:0000118 NCBI chr37:28,647,114...28,716,193
Ensembl chr37:28,647,115...28,716,198 		JBrowse link
G LRRC47 leucine rich repeat containing 47 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:58,286,909...58,297,961
Ensembl chr 5:58,288,392...58,297,996 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116 		JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116 		JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase ISO RGD PMID:15779086 RGD:2289784 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008 		JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in ISO (PMID:16731528) ParkinsonsUK-UCL PMID:16731528 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303 		JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr28:9,101,578...9,148,063
Ensembl chr28:9,102,282...9,147,992 		JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:360,353...364,795
Ensembl chr 9:360,376...364,570 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:38,902,705...38,905,924 JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr13:37,259,139...37,264,337
Ensembl chr13:37,259,139...37,264,337 		JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:18,032,663...18,057,277
Ensembl chr26:18,033,392...18,057,238 		JBrowse link
G LOC119877562 proline dehydrogenase 1, mitochondrial-like involved_in IEA InterPro GO_REF:0000002
G LOC477562 proline dehydrogenase 1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr26:29,039,007...29,059,722 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:116,831,722...116,842,698
Ensembl chr 1:116,831,722...116,916,278 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 2:79,688,078...79,712,340
Ensembl chr 2:79,688,086...79,710,540 		JBrowse link
G LOC119877562 proline dehydrogenase 1, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC477562 proline dehydrogenase 1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:29,039,007...29,059,722 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:116,831,722...116,842,698
Ensembl chr 1:116,831,722...116,916,278 		JBrowse link
G UBR4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 NCBI chr 2:79,403,336...79,536,385
Ensembl chr 2:79,403,351...79,536,208 		JBrowse link
proline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:79,688,078...79,712,340
Ensembl chr 2:79,688,086...79,710,540 		JBrowse link
G LOC119877562 proline dehydrogenase 1, mitochondrial-like involved_in IEA UniProt GO_REF:0000043
G LOC477562 proline dehydrogenase 1, mitochondrial involved_in IEA UniProt GO_REF:0000043 NCBI chr26:29,039,007...29,059,722 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:116,831,722...116,842,698
Ensembl chr 1:116,831,722...116,916,278 		JBrowse link
G UBR4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:79,403,336...79,536,385
Ensembl chr 2:79,403,351...79,536,208 		JBrowse link
prolyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr38:14,754,628...14,823,626
Ensembl chr38:14,754,632...14,823,621 		JBrowse link
G PARS2 prolyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:54,392,668...54,401,983
Ensembl chr 5:54,397,126...54,398,729 		JBrowse link
putrescine biosynthetic process from arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:81,980,959...81,990,377
Ensembl chr 2:81,981,376...81,989,916 		JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZIN1 antizyme inhibitor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:4,363,996...4,396,069
Ensembl chr13:4,361,340...4,396,040 		JBrowse link
G AZIN2 antizyme inhibitor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:68,288,554...68,323,710
Ensembl chr 2:68,286,195...68,323,710 		JBrowse link
G ODC1 ornithine decarboxylase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:7,368,699...7,376,970
Ensembl chr17:7,369,232...7,376,975 		JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:18,252,543...18,266,033
Ensembl chr 6:18,254,139...18,266,033 		JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase involved_in ISO (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chr 7:32,900,250...32,927,436
Ensembl chr 7:32,901,586...32,927,412 		JBrowse link
G SLC7A7 solute carrier family 7 member 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17376816) TreeGrafter
MGI		 PMID:17376816 GO_REF:0000118 NCBI chr 8:3,132,735...3,209,259
Ensembl chr 8:3,133,139...3,165,832 		JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INS insulin involved_in ISO (PMID:3553851) BHF-UCL PMID:3553851 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122 		JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17200146) Ensembl
MGI		 PMID:17200146 GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048 		JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO RGD PMID:19858196 RGD:6484536 NCBI chr 3:252,052...380,506
Ensembl chr 3:253,081...322,993 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21490221), (PMID:25429150)
(PMID:24548853)		 Ensembl
MGI		 PMID:21490221 PMID:24548853 PMID:25429150 GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048 		JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,228,831...16,244,104
Ensembl chr26:16,234,710...16,240,012 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase acts_upstream_of_or_within ISO (PMID:12023972) RGD
MGI		 PMID:11741948 PMID:12023972 RGD:730275 NCBI chr24:23,410,553...23,423,494
Ensembl chr24:23,411,140...23,419,767 		JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAMT guanidinoacetate N-methyltransferase ISO RGD PMID:15533043 RGD:1359081 NCBI chr20:57,440,698...57,442,588 JBrowse link
G GNMT glycine N-methyltransferase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15347642 GO_REF:0000118 RGD:1359070 NCBI chr12:11,500,363...11,503,075
Ensembl chr12:11,500,392...11,503,481 		JBrowse link
G GPR153 G protein-coupled receptor 153 ISO RGD PMID:9192075 RGD:2289655 NCBI chr 5:60,119,793...60,128,531
Ensembl chr 5:60,123,054...60,149,027 		JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:8263531 RGD:729481 NCBI chr 1:40,494,441...40,539,453
Ensembl chr 1:40,494,461...40,538,937 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chr 5:41,871,685...41,960,831
Ensembl chr 5:41,872,108...41,960,828 		JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARDH sarcosine dehydrogenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:50,030,397...50,093,556
Ensembl chr 9:50,030,707...50,091,553 		JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNMT glycine N-methyltransferase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:18501206 GO_REF:0000118 RGD:7242952 NCBI chr12:11,500,363...11,503,075
Ensembl chr12:11,500,392...11,503,481 		JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEPHS1 selenophosphate synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:23,147,303...23,178,808
Ensembl chr 2:23,146,353...23,177,174 		JBrowse link
G SEPHS2 selenophosphate synthetase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17346238) Ensembl
MGI
TreeGrafter		 PMID:17346238 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:17,667,766...17,670,007 JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCLY selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr25:48,574,648...48,608,367
Ensembl chr25:48,574,130...48,632,035 		JBrowse link
selenocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2S3 eukaryotic translation initiation factor 2 subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:19,662,132...19,680,223
Ensembl chr  X:19,650,343...19,680,221 		JBrowse link
G TXNRD1 thioredoxin reductase 1 ISO RGD PMID:10512699 RGD:634379 NCBI chr10:33,904,065...34,021,549
Ensembl chr10:33,886,343...34,021,696 		JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:25633902) BHF-UCL PMID:25633902 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453 		JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:38,196,605...38,212,624
Ensembl chr17:38,191,494...38,212,809 		JBrowse link
serine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr31:37,230,900...37,247,170 JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:30988181) MGI PMID:30988181 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G SRR serine racemase acts_upstream_of_or_within ISO (PMID:15536068) MGI PMID:15536068
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2D15 cytochrome P450 family 2 subfamily D member 15 ISO RGD PMID:23098818 RGD:11353778 NCBI chr10:23,255,259...23,259,380
Ensembl chr10:23,255,249...23,259,298 		JBrowse link
seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARS1 seryl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:42,584,792...42,605,201
Ensembl chr 6:42,584,798...42,605,136 		JBrowse link
G SARS2 seryl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:114,192,574...114,202,385 JBrowse link
threonine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:17034760) TreeGrafter
MGI		 PMID:17034760 GO_REF:0000118 NCBI chr17:38,196,605...38,212,624
Ensembl chr17:38,191,494...38,212,809 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr10:26,821,121...26,827,496
Ensembl chr10:26,821,027...26,827,707 		JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,725,123...10,728,087 JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:10,731,972...10,759,768
Ensembl chr26:10,743,947...10,759,777 		JBrowse link
G TDH L-threonine dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21896756) Ensembl
MGI
TreeGrafter		 PMID:21896756 GO_REF:0000107 GO_REF:0000118 NCBI chr25:26,541,717...26,560,366 JBrowse link
G THA1 threonine aldolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:2,909,869...2,917,921 JBrowse link
threonine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
threonyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARS1 threonyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:74,213,475...74,239,056
Ensembl chr 4:74,213,772...74,238,971 		JBrowse link
G TARS2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr17:59,681,889...59,695,747
Ensembl chr17:59,681,936...59,695,746 		JBrowse link
G TARS3 threonyl-tRNA synthetase 3 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:39,346,694...39,419,900
Ensembl chr 3:39,241,010...39,419,899 		JBrowse link
transsulfuration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase ISO RGD PMID:16636197 RGD:1600624 NCBI chr31:37,230,900...37,247,170 JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:75,324,328...75,348,476
Ensembl chr 6:75,324,787...75,349,451 		JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO RGD PMID:17130129 RGD:9685559 NCBI chr10:27,465,007...27,469,788
Ensembl chr10:27,443,865...27,469,554 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453 		JBrowse link
tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,378,705...25,406,975
Ensembl chr 7:25,378,705...25,406,947 		JBrowse link
G FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr35:5,389,694...5,887,911
Ensembl chr35:5,460,664...5,948,574 		JBrowse link
G FARSA phenylalanyl-tRNA synthetase subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr20:49,258,827...49,267,279
Ensembl chr20:49,258,845...49,267,198 		JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:16,139,462...16,162,701
Ensembl chr27:16,139,499...16,161,147 		JBrowse link
tRNA aminoacylation for mitochondrial protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:22,276,189...22,299,865
Ensembl chr 6:22,276,230...22,297,428 		JBrowse link
tRNA aminoacylation for protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:25,378,705...25,406,975
Ensembl chr 7:25,378,705...25,406,947 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr38:14,754,628...14,823,626
Ensembl chr38:14,754,632...14,823,621 		JBrowse link
G GARS1 glycyl-tRNA synthetase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr14:43,308,274...43,351,999
Ensembl chr14:43,308,152...43,396,487 		JBrowse link
G HARS1 histidyl-tRNA synthetase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:35,828,243...35,843,615
Ensembl chr 2:35,828,260...35,843,583 		JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr21:20,277,707...20,413,624
Ensembl chr21:20,277,507...20,606,736 		JBrowse link
G PARS2 prolyl-tRNA synthetase 2, mitochondrial involved_in IEA UniProt GO_REF:0000117 NCBI chr 5:54,392,668...54,401,983
Ensembl chr 5:54,397,126...54,398,729 		JBrowse link
G TARS1 threonyl-tRNA synthetase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:74,213,475...74,239,056
Ensembl chr 4:74,213,772...74,238,971 		JBrowse link
G TARS2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA UniProt GO_REF:0000117 NCBI chr17:59,681,889...59,695,747
Ensembl chr17:59,681,936...59,695,746 		JBrowse link
G TARS3 threonyl-tRNA synthetase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:39,346,694...39,419,900
Ensembl chr 3:39,241,010...39,419,899 		JBrowse link
G YARS1 tyrosyl-tRNA synthetase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:68,535,402...68,566,197
Ensembl chr 2:68,535,447...68,565,439 		JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr19:37,658,999...37,725,426
Ensembl chr19:37,659,226...37,725,172 		JBrowse link
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:45,368,157...45,379,521
Ensembl chr10:45,368,178...45,379,160 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:25,319,035...25,375,085
Ensembl chr16:25,319,035...25,385,515 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541 		JBrowse link
G KYNU kynureninase involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 GO_REF:0000117 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958 		JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7236232 GO_REF:0000118 RGD:2303721 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958 		JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422 		JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15866519) InterPro
MGI
UniProt		 PMID:15866519 GO_REF:0000002 GO_REF:0000041
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11751753), (PMID:2419335) RGD
UniProt
MGI
TreeGrafter
InterPro		 PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:2290190 RGD:2290543 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17499941)
(PMID:17671174)		 InterPro
UniProt
MGI
TreeGrafter
Ensembl		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr16:25,319,035...25,375,085
Ensembl chr16:25,319,035...25,385,515 		JBrowse link
G KYNU kynureninase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958 		JBrowse link
tryptophan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:4147174) MGI PMID:4147174 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:3400092 PMID:3899109 PMID:10719243 RGD:2290190 RGD:2290313 RGD:2291804 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958 		JBrowse link
tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WARS1 tryptophanyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:68,610,105...68,644,616
Ensembl chr 8:68,610,090...68,643,467 		JBrowse link
G WARS2 tryptophanyl tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr17:56,229,175...56,322,688
Ensembl chr17:56,229,769...56,322,638 		JBrowse link
tyrosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16953590 GO_REF:0000118 RGD:1601531 NCBI chr15:41,590,253...41,670,156
Ensembl chr15:41,592,876...41,670,837 		JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:58807|PMID:2308957) RGD
GOC
GOC		 PMID:2308957 PMID:10839989 GO_REF:0000108 MGI:58807 RGD:1601535 NCBI chr15:41,590,253...41,670,156
Ensembl chr15:41,592,876...41,670,837 		JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:21,719,863...21,723,493
Ensembl chr 4:21,719,863...21,721,574 		JBrowse link
G PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr11:22,998,005...23,015,572
Ensembl chr11:22,951,201...23,015,572 		JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr 3:57,300,422...57,326,546
Ensembl chr 3:57,300,441...57,326,486 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:50,133,496...50,143,487
Ensembl chr 8:50,133,714...50,143,439 		JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31537781) MGI
TreeGrafter		 PMID:31537781 GO_REF:0000118 NCBI chr26:7,430,891...7,440,643
Ensembl chr26:7,430,933...7,440,611 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419 		JBrowse link
tyrosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:4147174) MGI PMID:4147174 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr33:24,066,099...24,107,827
Ensembl chr33:24,066,306...24,151,354 		JBrowse link
G IYD iodotyrosine deiodinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:40,890,402...40,908,437
Ensembl chr 1:40,890,435...40,908,439 		JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr33:24,107,754...24,151,378
Ensembl chr33:24,066,306...24,151,354 		JBrowse link
G THAP4 THAP domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:51,456,349...51,480,753
Ensembl chr25:51,456,344...51,494,367 		JBrowse link
G TTC36 tetratricopeptide repeat domain 36 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31537781) Ensembl
MGI		 PMID:31537781 GO_REF:0000107 NCBI chr 5:15,207,400...15,211,905
Ensembl chr 5:15,207,403...15,211,853 		JBrowse link
tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YARS1 tyrosyl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:68,535,402...68,566,197
Ensembl chr 2:68,535,447...68,565,439 		JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr27:16,139,462...16,162,701
Ensembl chr27:16,139,499...16,161,147 		JBrowse link
valine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:47,013,033...47,021,511
Ensembl chr20:47,012,557...47,021,778 		JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:2768248 GO_REF:0000107 GO_REF:0000118 RGD:1599052 NCBI chr 8:47,280,872...47,304,460
Ensembl chr 8:47,282,235...47,304,283 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 6:17,128,615...17,132,925
Ensembl chr 6:17,128,824...17,133,585 		JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr14:40,672,294...40,780,608
Ensembl chr14:40,673,008...40,780,516 		JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr37:841,385...943,972
Ensembl chr37:841,414...943,941 		JBrowse link
valine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISO PMID:2768248 UniProt PMID:2768248 RGD:1599052 NCBI chr 8:47,280,872...47,304,460
Ensembl chr 8:47,282,235...47,304,283 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14755340)
(PMID:17767905)		 Ensembl
MGI		 PMID:14755340 PMID:17767905 GO_REF:0000107 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234 		JBrowse link
valyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VARS1 valyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:1,254,954...1,269,242
Ensembl chr12:1,254,952...1,269,208 		JBrowse link
G VARS2 valyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:681,638...694,154
Ensembl chr12:680,484...693,913 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      organic substance metabolic process 10554
        amino acid metabolic process 301
          alpha-amino acid metabolic process + 220
          amino acid activation + 47
          amino acid biosynthetic process + 82
          amino acid catabolic process + 108
          aromatic amino acid metabolic process + 35
          branched-chain amino acid metabolic process + 28
          carnosine metabolic process + 2
          chiral amino acid racemization + 0
          diaminopimelate metabolic process + 0
          negative regulation of cellular amino acid metabolic process + 3
          nicotianamine metabolic process + 0
          non-proteinogenic amino acid metabolic process + 71
          positive regulation of amino acid metabolic process + 3
          proteinogenic amino acid metabolic process + 175
          regulation of cellular amino acid metabolic process + 13
paths to the root