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ONTOLOGY REPORT - ANNOTATIONS


Term:amino acid metabolic process
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Accession:GO:0006520 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
Synonyms:exact_synonym: cellular amino acid metabolic process;   cellular amino acid metabolism
 related_synonym: amino acid and derivative metabolism;   cellular amino acid and derivative metabolic process
 alt_id: GO:0006519



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amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD14A abhydrolase domain containing 14A involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:51,915,031...51,922,653
Ensembl chr 3:53,144,802...53,158,941
JBrowse link
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:44,026,501...44,044,928
Ensembl chr11:44,522,797...44,699,447
JBrowse link
G ACY1 aminoacylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:51,924,889...51,930,638
Ensembl chr 3:53,144,802...53,158,941
JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:7818476 RGD:1298553 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
JBrowse link
G ASPG asparaginase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:84,711,400...84,739,769
Ensembl chr14:104,517,278...104,544,589
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28701731) Ensembl
MGI
PMID:28701731 GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316
JBrowse link
G DDC dopa decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710
JBrowse link
G DIO1 iodothyronine deiodinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,167,840...53,184,961
Ensembl chr 1:54,762,744...54,779,679
JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911) UniProt PMID:14754911 NCBI chr22:5,424,334...5,469,705 JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:5,025,740...5,053,074
Ensembl chr22:23,110,780...23,125,632
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:37,234,593...37,241,464
Ensembl chr 8:34,412,465...34,418,343
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IEA
RGD
InterPro
PMID:14522984 GO_REF:0000002 RGD:1582383 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
G HDC histidine decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:29,188,296...29,212,327
Ensembl chr15:47,510,629...47,534,577
JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8188247) Ensembl
MGI
UniProt
PMID:8188247 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:117,735,772...117,790,096
Ensembl chr 3:124,646,431...124,700,733
JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:91,636,681...91,708,859
Ensembl chr 1:90,403,072...90,460,426
JBrowse link
G OTC ornithine transcarbamylase involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819
JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:181,437,045...181,459,103
Ensembl chr 1:185,720,642...185,742,757
JBrowse link
G SDS serine dehydratase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839
JBrowse link
G SDSL serine dehydratase like involved_in IEA InterPro GO_REF:0000002 NCBI chr12:111,024,957...111,040,900
Ensembl chr12:114,406,738...114,422,347
JBrowse link
G SLC16A2 solute carrier family 16 member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:26305885) ARUK-UCL
Ensembl
PMID:26305885 GO_REF:0000107 NCBI chr  X:63,673,992...63,787,011
Ensembl chr  X:73,791,200...73,903,727
JBrowse link
G SRR serine racemase involved_in IEA InterPro GO_REF:0000002 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704
JBrowse link
G TAT tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886
JBrowse link
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993
JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000104 NCBI chr17:72,265,365...72,285,764
Ensembl chr17:77,816,908...77,835,905
JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chr2A:42,857,216...42,882,738
Ensembl chr2A:43,704,468...43,729,887
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr 8:39,149,045...39,209,671
Ensembl chr 8:36,665,240...36,717,420
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866
JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000104 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chr10:94,204,627...94,233,312 JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:16906134) RGD
TreeGrafter
MGI
InterPro
Ensembl
PMID:2040280 PMID:16906134 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2302982 NCBI chr16:54,727,601...54,763,458
Ensembl chr16:70,086,735...70,121,902
JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 6:43,895,255...43,909,347
Ensembl chr 6:45,176,773...45,191,505
JBrowse link
G AARSD1 alanyl-tRNA synthetase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:14,358,207...14,372,668 JBrowse link
G PTGES3L prostaglandin E synthase 3 like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:14,344,870...14,355,271 JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:162,283,569...162,313,720
Ensembl chr 4:174,353,766...174,383,471
JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24467666) Ensembl
MGI
PMID:24467666 GO_REF:0000107 NCBI chr 4:67,536,000...67,591,204
Ensembl chr 4:74,110,736...74,159,809
JBrowse link
amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G OTC ornithine transcarbamylase involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819
JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:76,337,991...76,348,207
Ensembl chr17:82,040,824...82,045,686
JBrowse link
amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:13,613,425...13,652,583
Ensembl chr18:17,256,489...17,294,287
JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:55,128,686...55,227,369
Ensembl chr15:74,720,198...74,818,494
JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:48,281,101...48,301,527
Ensembl chr19:57,166,829...57,175,582
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411
JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr2A:42,857,216...42,882,738
Ensembl chr2A:43,704,468...43,729,887
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866
JBrowse link
G KYNU kynureninase involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA Ensembl
UniProt
GO_REF:0000041 GO_REF:0000107 NCBI chr 7:59,908,648...59,948,822
Ensembl chr 7:73,142,842...73,157,472
Ensembl chr 7:73,142,842...73,157,472
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA
RGD
TreeGrafter
UniProt
Ensembl
InterPro
PMID:12470967 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:631755 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G NAGS N-acetylglutamate synthase involved_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr17:13,386,207...13,390,724
Ensembl chr17:13,553,424...13,558,269
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 7:59,908,648...59,948,822
Ensembl chr 7:73,142,842...73,157,472
Ensembl chr 7:73,142,842...73,157,472
JBrowse link
G OTC ornithine transcarbamylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chr 1:117,875,875...118,136,304 JBrowse link
G FAH fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO (PMID:11209059) MGI PMID:11209059 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chr12:114,784,232...114,938,385
Ensembl chr12:118,163,655...118,314,005
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:120,955,805...120,977,484
Ensembl chr10:125,224,032...125,245,504
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 ISO RGD PMID:15753084 RGD:8693655 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162
JBrowse link
G ARG2 arginase 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:15753084 GO_REF:0000118 RGD:8693655 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:120,955,805...120,977,484
Ensembl chr10:125,224,032...125,245,504
JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:14,711,891...14,723,546
Ensembl chr 1:15,704,989...15,717,428
JBrowse link
G ARG1 arginase 1 involved_in ISO
IEA
RGD
UniProt
InterPro
PMID:4062872 GO_REF:0000002 GO_REF:0000043 RGD:2300098 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162
JBrowse link
G ARG2 arginase 2 involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:16537391 GO_REF:0000002 GO_REF:0000043 RGD:1582129 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
JBrowse link
G ASL argininosuccinate lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,908,648...59,948,822
Ensembl chr 7:73,142,842...73,157,472
Ensembl chr 7:73,142,842...73,157,472
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:17322279 GO_REF:0000118 RGD:1625578 NCBI chr 1:117,875,875...118,136,304 JBrowse link
G DDAH2 DDAH family member 2, ADMA-independent involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,388,401...31,391,637
Ensembl chr 6:32,277,102...32,280,338
JBrowse link
G SLC39A8 solute carrier family 39 member 8 acts_upstream_of
involved_in
ISO
IEA
(MGI:5912781|PMID:28481222) UniProt
Ensembl
PMID:28481222 GO_REF:0000107 MGI:5912781 NCBI chr 4:94,675,458...94,770,380
Ensembl chr 4:105,339,488...105,433,568
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:4062872 GO_REF:0000107 GO_REF:0000118 RGD:2300098 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DALRD3 DALR anticodon binding domain containing 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:48,940,126...48,945,717
Ensembl chr 3:50,021,669...50,024,522
JBrowse link
G RARS1 arginyl-tRNA synthetase 1 involved_in ISO
IEA
RGD
TreeGrafter
InterPro
Ensembl
PMID:7082655 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2303394 NCBI chr 5:163,851,644...163,884,787
Ensembl chr 5:170,616,819...170,649,655
JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 6:85,391,061...85,466,888
Ensembl chr 6:88,665,543...88,741,371
JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAT tyrosine aminotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886
JBrowse link
aromatic amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098
JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:57,874,184...57,901,397
Ensembl chr14:77,075,814...77,086,530
JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:119,442,893...119,462,171
Ensembl chr12:122,813,141...122,831,701
JBrowse link
G HPDL 4-hydroxyphenylpyruvate dioxygenase like involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:44,629,560...44,631,394
Ensembl chr 1:45,988,494...45,989,609
JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726
JBrowse link
G TH tyrosine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:18,070,576...18,099,539
Ensembl chr11:17,754,893...17,778,076
JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:69,460,883...69,557,329
Ensembl chr12:72,318,908...72,412,557
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:2573597) RGD
TreeGrafter
InterPro
UniProt
Ensembl
MGI
PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2316002 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr2B:76,967,753...76,977,139
Ensembl chr2B:194,887,530...194,896,927
JBrowse link
G LOC100981233 asparagine synthetase [glutamine-hydrolyzing]-like involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 8:43,010,778...43,045,817 JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:12753071 MGI
Ensembl
PMID:12753071 GO_REF:0000107 RGD:1299508 NCBI chr11:57,700,104...57,750,371
Ensembl chr11:61,056,817...61,107,485
JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr14:84,711,400...84,739,769
Ensembl chr14:104,517,278...104,544,589
JBrowse link
G NIT2 nitrilase family member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:97,427,470...97,448,354
Ensembl chr 3:104,109,804...104,130,535
JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr18:50,991,047...51,011,628
Ensembl chr18:54,326,053...54,346,454
JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr11:73,496,423...73,634,623
Ensembl chr11:77,117,668...77,255,037
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:4193185) Ensembl
TreeGrafter
MGI
PMID:4193185 GO_REF:0000107 GO_REF:0000118 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
aspartate family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in IEA UniProt GO_REF:0000117 NCBI chr14:84,711,400...84,739,769
Ensembl chr14:104,517,278...104,544,589
JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 Ensembl chr14:105,169,769...105,190,333 JBrowse link
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chr 1:220,020,480...220,063,658
Ensembl chr 1:225,401,544...225,444,984
JBrowse link
G ASPA aspartoacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:3,492,304...3,517,882
Ensembl chr17:3,522,858...3,546,279
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G DDO D-aspartate oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16525061) Ensembl
MGI
PMID:16525061 GO_REF:0000107 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2837211 RGD:2289377 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:12686151 RGD:2289396 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
G NAT8L N-acetyltransferase 8 like involved_in ISO (PMID:28077719) MGI PMID:28077719 NCBI chr 4:2,201,326...2,211,302 JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS1 aspartyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr2B:23,876,931...23,956,032
Ensembl chr2B:139,977,483...140,056,836
JBrowse link
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:149,342,301...149,375,979
Ensembl chr 1:153,045,886...153,080,461
JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr22:5,300,686...5,332,735
Ensembl chr22:22,166,370...22,197,360
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr14:54,616,531...54,643,346
Ensembl chr14:73,472,255...73,495,734
JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24467666) Ensembl
MGI
PMID:24467666 GO_REF:0000107 NCBI chr 4:67,536,000...67,591,204
Ensembl chr 4:74,110,736...74,159,809
JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chr 8:101,008,090...101,096,234
Ensembl chr 8:103,160,922...103,248,303
JBrowse link
G UPB1 beta-ureidopropionase 1 ISO RGD PMID:7626590 RGD:1624989 NCBI chr22:5,300,686...5,332,735
Ensembl chr22:22,166,370...22,197,360
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (PMID:14755340) MGI PMID:14755340 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14755340) RGD
MGI
Ensembl
PMID:11733007 PMID:14755340 GO_REF:0000107 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,391,618...38,418,826
Ensembl chr19:46,898,024...46,925,171
JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:78,005,287...78,246,287
Ensembl chr 6:81,276,836...81,516,787
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639
JBrowse link
G DBT dihydrolipoamide branched chain transacylase E2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,852,585...102,907,146
Ensembl chr 1:101,567,551...101,621,850
JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629
JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:28,166,127...28,299,845
Ensembl chr 7:27,763,021...27,896,598
JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:77,510,938...77,652,911 JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr15:19,342,283...19,372,465
Ensembl chr15:37,596,688...37,609,902
JBrowse link
G PPM1K protein phosphatase, Mg2+/Mn2+ dependent 1K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,548,652...80,575,555
Ensembl chr 4:91,272,142...91,298,274
JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:131,535,399...131,556,750
Ensembl chr 1:135,366,049...135,387,643
JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20237068) Ensembl
MGI
InterPro
PMID:20237068 GO_REF:0000002 GO_REF:0000107 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNS1 carnosine synthase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20097752), (PMID:24891507) MGI
TreeGrafter
Ensembl
InterPro
PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,774,027...62,784,066
Ensembl chr11:66,085,594...66,097,970
JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNMT1 carnosine N-methyltransferase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:49,806,082...49,854,079
Ensembl chr 9:73,837,056...73,884,964
JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA
RGD
TreeGrafter
PMID:7053379 GO_REF:0000118 RGD:10755426 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804
JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:9472964 GO_REF:0000107 GO_REF:0000118 RGD:4144071 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819
JBrowse link
citrulline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:117,875,875...118,136,304 JBrowse link
G DDAH2 DDAH family member 2, ADMA-independent NOT|involved_in ISO
IEA
(PMID:21493890), (PMID:37296100) UniProt
TreeGrafter
PMID:21493890 PMID:37296100 GO_REF:0000118 NCBI chr 6:31,388,401...31,391,637
Ensembl chr 6:32,277,102...32,280,338
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:17213233) MGI PMID:17213233 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730
JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15030387) UniProt
MGI
Ensembl
PMID:15030387 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666
JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (MGI:5294309|PMID:12468440) UniProt PMID:12468440 MGI:5294309 NCBI chr22:5,424,334...5,469,705 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666
JBrowse link
cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994
JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12384496) Ensembl
MGI
PMID:12384496 GO_REF:0000107 NCBI chr 1:96,548,850...96,573,273
Ensembl chr 1:95,278,665...95,297,893
JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARS1 cysteinyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:3,026,787...3,083,170
Ensembl chr11:3,053,551...3,109,509
JBrowse link
G CARS2 cysteinyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr13:91,776,774...91,843,262
Ensembl chr13:110,892,948...110,957,000
JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in ISO (PMID:29274788)
(PMID:16751595), (PMID:2572224)
UniProt PMID:2572224 PMID:16751595 PMID:29274788 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
G DDO D-aspartate oxidase involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980
JBrowse link
D-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
G DAOA D-amino acid oxidase activator involved_in ISO (PMID:12364586), (PMID:21679769) UniProt PMID:12364586 PMID:21679769 NCBI chr13:86,607,991...86,631,776 JBrowse link
G DDO D-aspartate oxidase involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRR serine racemase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237) Ensembl
TreeGrafter
MGI
PMID:10557334 PMID:11054547 PMID:12021263 PMID:15710237 GO_REF:0000107 GO_REF:0000118 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in ISO (PMID:21679769) UniProt PMID:21679769 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
G SRR serine racemase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704
JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TH tyrosine hydroxylase involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:9520487)
(PMID:7592982), (PMID:7715703)
RGD
TreeGrafter
MGI
Ensembl
PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:19584816 GO_REF:0000107 GO_REF:0000118 RGD:1580046 RGD:5130972 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:19540876 RGD:9588538 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420
JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 involved_in ISO (MGI:5697738|PMID:26430123) UniProt PMID:26430123 MGI:5697738 NCBI chr 9:51,737,305...51,916,648
Ensembl chr 9:71,680,890...71,814,085
JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:17712632 GO_REF:0000107 GO_REF:0000118 RGD:6480258 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944
JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:22108820 GO_REF:0000118 RGD:401900601 NCBI chr10:26,392,877...26,481,859
Ensembl chr10:26,759,243...26,843,197
JBrowse link
G SLC1A3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15305132) Ensembl
MGI
PMID:15305132 GO_REF:0000107 NCBI chr 5:73,679,841...73,761,591
Ensembl chr 5:78,960,797...79,042,694
JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,464,360...42,550,324
Ensembl chr12:43,362,597...43,413,616
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in ISO (PMID:11561735) UniProt PMID:11561735 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:11544478), (PMID:15262267) Ensembl
TreeGrafter
MGI
UniProt
InterPro
PMID:11544478 PMID:15262267 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151
JBrowse link
gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12067239), (PMID:16504488), (PMID:16647690) Ensembl
MGI
PMID:12067239 PMID:16504488 PMID:16647690 GO_REF:0000107 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151
JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19114063) Ensembl
MGI
PMID:19114063 GO_REF:0000107 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr2B:78,182,117...78,267,071
Ensembl chr2B:196,098,910...196,183,323
JBrowse link
G GLS2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,426,264...32,443,690
Ensembl chr12:32,678,814...32,696,694
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr  X:110,223,978...111,065,243 JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr2B:59,071,123...59,297,327
Ensembl chr2B:176,532,940...176,641,894
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr  X:110,223,978...111,065,243 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:62,975,711...63,012,102
Ensembl chr 8:64,642,062...64,678,306
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD2 glutamate decarboxylase 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:8999827 GO_REF:0000118 RGD:1625237 NCBI chr10:26,392,877...26,481,859
Ensembl chr10:26,759,243...26,843,197
JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:162,283,569...162,313,720
Ensembl chr 4:174,353,766...174,383,471
JBrowse link
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17854388) Ensembl
MGI
PMID:17854388 GO_REF:0000107 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28701731) Ensembl
MGI
PMID:28701731 GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316
JBrowse link
G DGLUCY D-glutamate cyclase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:71,678,891...71,851,806
Ensembl chr14:91,089,132...91,199,043
JBrowse link
G FPGS folylpolyglutamate synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,921,986...98,933,542
Ensembl chr 9:127,593,592...127,604,200
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994
JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:96,548,850...96,573,273
Ensembl chr 1:95,278,665...95,297,893
JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:21447318), (PMID:24047895) UniProt PMID:21447318 PMID:24047895 NCBI chr22:5,424,334...5,469,705 JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in ISO (PMID:8207021) UniProt PMID:8207021 NCBI chr  X:110,223,978...111,065,243 JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:4403443 RGD:2301548 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411
JBrowse link
G MTHFS methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr15:58,810,966...58,864,831
Ensembl chr15:77,770,216...77,822,206
JBrowse link
G NAGS N-acetylglutamate synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12049647) Ensembl
TreeGrafter
MGI
PMID:12049647 GO_REF:0000107 GO_REF:0000118 NCBI chr17:13,386,207...13,390,724
Ensembl chr17:13,553,424...13,558,269
JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase involved_in ISO
IEA
RGD
TreeGrafter
InterPro
PMID:28323 PMID:4403443 GO_REF:0000002 GO_REF:0000118 RGD:2301547 RGD:2301548 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411
JBrowse link
G LGSN lengsin, lens protein with glutamine synthetase domain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:60,964,873...61,008,833
Ensembl chr 6:66,239,052...66,280,600
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16641247) Ensembl
TreeGrafter
MGI
PMID:16641247 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:78,182,117...78,267,071
Ensembl chr2B:196,098,910...196,183,323
JBrowse link
G GLS2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,426,264...32,443,690
Ensembl chr12:32,678,814...32,696,694
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr 4:67,491,407...67,533,822
Ensembl chr 4:74,059,966...74,102,002
JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:12522136 RGD:5135508 Ensembl chr14:105,169,769...105,190,333 JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28701731) Ensembl
MGI
PMID:28701731 GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316
JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA
RGD
TreeGrafter
UniProt
InterPro
PMID:2474281 PMID:2803258 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:10755425 RGD:5132588 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728
JBrowse link
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:40,275,581...40,308,421
Ensembl chr 1:41,592,509...41,624,455
JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr  X:9,209,727...9,332,641
Ensembl chr  X:16,579,409...16,693,184
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:175,504,272...175,558,610
Ensembl chr 5:182,815,719...182,869,823
JBrowse link
G GGH gamma-glutamyl hydrolase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 8:59,547,821...59,571,523
Ensembl chr 8:61,222,194...61,246,252
JBrowse link
G GLS glutaminase involved_in IEA InterPro GO_REF:0000002 NCBI chr2B:78,182,117...78,267,071
Ensembl chr2B:196,098,910...196,183,323
JBrowse link
G GLS2 glutaminase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:32,426,264...32,443,690
Ensembl chr12:32,678,814...32,696,694
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (MGI:5499916|PMID:23663782) UniProt PMID:23663782 MGI:5499916 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GMPS guanine monophosphate synthase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 3:152,925,905...152,999,180
Ensembl chr 3:160,977,222...161,045,214
JBrowse link
G LOC100978318 glycine N-acyltransferase-like protein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:54,159,741...54,210,180
Ensembl chr11:57,655,482...57,668,640
JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:17237885) MGI PMID:17237885 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854
JBrowse link
G NIT2 nitrilase family member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:97,427,470...97,448,354
Ensembl chr 3:104,109,804...104,130,535
JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO
IEA
RGD
UniProt
PMID:3436958 GO_REF:0000043 GO_REF:0000104 RGD:1599004 NCBI chr17:43,389,389...43,409,454
Ensembl chr17:48,121,606...48,141,720
JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19114063) Ensembl
MGI
PMID:19114063 GO_REF:0000107 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,867,453...117,887,968
Ensembl chr12:121,241,112...121,261,777
JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in ISO PMID:10660562 UniProt PMID:10660562 RGD:68922 NCBI chr12:42,464,360...42,550,324
Ensembl chr12:43,362,597...43,413,616
JBrowse link
G UCP2 uncoupling protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185
JBrowse link
glutaminyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:141,562,798...141,631,388
Ensembl chr 5:147,578,042...147,646,834
JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 3:49,020,310...49,029,443
Ensembl chr 3:50,100,216...50,125,112
JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 3:49,032,373...49,045,238
Ensembl chr 3:50,100,216...50,125,112
JBrowse link
glutaminyl-tRNAGln biosynthesis via transamidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATB glutamyl-tRNA amidotransferase subunit B involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:144,005,127...144,095,552
Ensembl chr 4:155,657,600...155,747,679
JBrowse link
G GATC glutamyl-tRNA amidotransferase subunit C involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr12:118,028,042...118,045,403
Ensembl chr12:121,402,532...121,419,628
JBrowse link
G QRSL1 glutaminyl-tRNA amidotransferase subunit QRSL1 involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:104,444,646...104,481,732
Ensembl chr 6:108,315,270...108,353,505
JBrowse link
glutamyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:14,552,664...14,588,022
Ensembl chr16:23,774,123...23,809,873
JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:195,537,319...195,618,257
Ensembl chr 1:200,575,259...200,656,197
JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO
IEA
in the presence of tetrahydrofolate RGD
TreeGrafter
InterPro
PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA
in the presence of tetrahydrofolate RGD
TreeGrafter
InterPro
PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:12383475 GO_REF:0000107 GO_REF:0000118 RGD:1599457 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837
JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,322,351...75,373,261
Ensembl chr 5:80,601,554...80,652,575
JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:49,344,590...49,350,383
Ensembl chr 3:50,589,193...50,594,968
JBrowse link
G GLDC glycine decarboxylase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:6,347,381...6,456,042
Ensembl chr 9:6,527,242...6,635,779
JBrowse link
G LOC134730274 glycine dehydrogenase (decarboxylating), mitochondrial-like involved_in IEA InterPro GO_REF:0000002
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,344,590...49,350,383
Ensembl chr 3:50,589,193...50,594,968
JBrowse link
G GCSH glycine cleavage system protein H involved_in ISO
IEA
RGD
TreeGrafter
UniProt
InterPro
PMID:6402507 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:1598699 NCBI chr16:61,688,959...61,702,364 JBrowse link
G GLDC glycine decarboxylase involved_in ISO
IEA
RGD
TreeGrafter
PMID:6778858 GO_REF:0000118 RGD:1642728 NCBI chr 9:6,347,381...6,456,042
Ensembl chr 9:6,527,242...6,635,779
JBrowse link
G LOC100972512 glycine cleavage system H protein, mitochondrial involved_in IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:2,715,864...2,716,960 JBrowse link
G LOC100987372 glycine cleavage system H protein, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:112,555,685...112,556,804 JBrowse link
glycine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,568,002...72,593,179
Ensembl chr 9:100,563,040...100,586,189
JBrowse link
G FPGS folylpolyglutamate synthase involved_in ISO (PMID:10964921) UniProt PMID:10964921 NCBI chr 9:98,921,986...98,933,542
Ensembl chr 9:127,593,592...127,604,200
JBrowse link
G GLYAT glycine-N-acyltransferase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:53,963,676...53,985,965
Ensembl chr11:57,423,438...57,438,213
JBrowse link
G GNMT glycine N-methyltransferase involved_in ISO PMID:10756111 RGD
CAFA
PMID:10756111 PMID:18501206 RGD:12793006 RGD:7242952 NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679
JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30988181) Ensembl
MGI
PMID:30988181 GO_REF:0000107 NCBI chr  X:36,399,868...36,424,953
Ensembl chr  X:44,224,161...44,249,067
JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19114063) Ensembl
MGI
PMID:19114063 GO_REF:0000107 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:15671219 GO_REF:0000107 RGD:1359815 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:10457370 PMID:15671219 GO_REF:0000107 RGD:1359815 RGD:2300380 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
JBrowse link
glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GARS1 glycyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19470612) Ensembl
MGI
InterPro
PMID:19470612 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:31,208,351...31,247,841
Ensembl chr 7:31,329,456...31,368,582
JBrowse link
histidyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HARS1 histidyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:136,038,575...136,056,400
Ensembl chr 5:142,154,552...142,172,371
JBrowse link
G LOC100969951 histidine--tRNA ligase, mitochondrial involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:136,056,060...136,065,588
Ensembl chr 5:142,172,081...142,179,950
JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLMH bleomycin hydrolase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:26,476,039...26,519,782
Ensembl chr17:26,993,361...27,038,131
JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322
JBrowse link
homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10953023), (PMID:10993757), (PMID:15131763), (PMID:15555590), (PMID:15622513), (PMID:15916860), (PMID:16226235), (PMID:18541157), (PMID:7878023) Ensembl
MGI
PMID:7878023 PMID:10953023 PMID:10993757 PMID:15131763 PMID:15555590 More... GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728
JBrowse link
G DPEP1 dipeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:70,365,900...70,392,377
Ensembl chr16:89,975,105...89,997,978
JBrowse link
G MMUT methylmalonyl-CoA mutase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,007,500...49,040,470
Ensembl chr 6:50,269,644...50,302,593
JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in ISO
IEA
RGD
Ensembl
PMID:18726220 GO_REF:0000107 RGD:2317121 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:11730351 PMID:21121936 RGD:1601423 RGD:7207080 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (MGI:3710265|PMID:17369066) BHF-UCL PMID:17369066 MGI:3710265 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322
JBrowse link
G NOX4 NADPH oxidase 4 involved_in ISO (PMID:20031578) UniProt PMID:20031578 NCBI chr11:84,330,362...84,496,755 JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:143,091,833...143,181,831
Ensembl chr 3:150,675,424...150,764,939
JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:93,347,335...93,358,921
Ensembl chr 7:106,587,858...106,599,605
JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:14,648,081...14,658,879
Ensembl chr19:15,632,614...15,643,414
JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:111,024,957...111,040,900
Ensembl chr12:114,406,738...114,422,347
JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,565,913...119,612,092
Ensembl chr10:123,839,570...123,886,759
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17767905) RGD
MGI
Ensembl
PMID:11733007 PMID:17767905 GO_REF:0000107 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639
JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643
JBrowse link
isoleucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14755340) Ensembl
MGI
PMID:14755340 GO_REF:0000107 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
isoleucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IARS1 isoleucyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8052601) MGI
TreeGrafter
Ensembl
InterPro
PMID:8052601 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:63,332,030...63,415,567
Ensembl chr 9:91,406,008...91,489,167
JBrowse link
G IARS2 isoleucyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 1:195,666,995...195,720,661
Ensembl chr 1:200,703,711...200,757,648
JBrowse link
kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:162,283,569...162,313,720
Ensembl chr 4:174,353,766...174,383,471
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866
JBrowse link
G KYAT1 kynurenine aminotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:99,956,240...100,004,366
Ensembl chr 9:128,623,946...128,637,844
JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:91,636,681...91,708,859
Ensembl chr 1:90,403,072...90,460,426
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837
JBrowse link
G GPT glutamic--pyruvic transaminase involved_in IEA UniProt GO_REF:0000041 Ensembl chr 8:144,259,991...144,263,737 JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr16:27,150,159...27,197,006
Ensembl chr16:46,040,439...46,086,840
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:75,322,351...75,373,261
Ensembl chr 5:80,601,554...80,652,575
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:27,150,159...27,197,006
Ensembl chr16:46,040,439...46,086,840
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in ISO (PMID:11960987) UniProt PMID:11960987 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837
JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G CDO1 cysteine dioxygenase type 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:16611641 GO_REF:0000118 RGD:2301357 NCBI chr 5:111,159,041...111,170,965
Ensembl chr 5:116,955,295...116,967,506
JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr12:35,572,064...35,598,077
Ensembl chr12:36,354,437...36,379,738
JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr12:35,572,064...35,598,077
Ensembl chr12:36,354,437...36,379,738
JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:16489927 RGD:13504861 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:16489927 RGD:13504861 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378
JBrowse link
L-histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:93,534,881...93,557,762
Ensembl chr12:96,923,879...96,946,507
JBrowse link
G HAL histidine ammonia-lyase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8486363) InterPro
TreeGrafter
MGI
Ensembl
PMID:8486363 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662
JBrowse link
G HDC histidine decarboxylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11478947) Ensembl
TreeGrafter
MGI
PMID:11478947 GO_REF:0000107 GO_REF:0000118 NCBI chr15:29,188,296...29,212,327
Ensembl chr15:47,510,629...47,534,577
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119
JBrowse link
L-histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 NCBI chr12:93,534,881...93,557,762
Ensembl chr12:96,923,879...96,946,507
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr21:32,481,042...32,501,932
Ensembl chr21:45,734,825...45,753,400
JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119
JBrowse link
L-histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr12:93,534,881...93,557,762
Ensembl chr12:96,923,879...96,946,507
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr21:32,481,042...32,501,932
Ensembl chr21:45,734,825...45,753,400
JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119
JBrowse link
L-histidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:93,534,881...93,557,762
Ensembl chr12:96,923,879...96,946,507
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000043 NCBI chr21:32,481,042...32,501,932
Ensembl chr21:45,734,825...45,753,400
JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662
JBrowse link
G HDC histidine decarboxylase ISO RGD PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chr15:29,188,296...29,212,327
Ensembl chr15:47,510,629...47,534,577
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119
JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYAT3 kynurenine aminotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:91,636,681...91,708,859
Ensembl chr 1:90,403,072...90,460,426
JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000041 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
L-kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA GOC GO_REF:0000108 NCBI chr 4:162,283,569...162,313,720
Ensembl chr 4:174,353,766...174,383,471
JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:23690293 RGD:13513904 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866
JBrowse link
G KYAT1 kynurenine aminotransferase 1 involved_in ISO
IEA
RGD
GOC
PMID:7796908 GO_REF:0000108 RGD:9685040 NCBI chr 9:99,956,240...100,004,366
Ensembl chr 9:128,623,946...128,637,844
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:11733007 GO_REF:0000118 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639
JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:22,993,489...23,017,307
Ensembl chr 1:23,977,723...24,001,150
JBrowse link
G HMGCLL1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:54,979,984...55,125,291
Ensembl chr 6:56,614,757...56,759,659
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chr15:19,342,283...19,372,465
Ensembl chr15:37,596,688...37,609,902
JBrowse link
G MCCC2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chr 5:43,650,993...43,724,877
Ensembl chr 5:44,298,650...44,369,106
JBrowse link
L-leucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14755340)
(PMID:17767905)
Ensembl
MGI
PMID:14755340 PMID:17767905 GO_REF:0000107 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887
JBrowse link
G DAO D-amino acid oxidase acts_upstream_of_or_within ISO (PMID:15026304) MGI PMID:15026304 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10567240) Ensembl
MGI
PMID:10567240 GO_REF:0000107 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:27,717,083...27,820,776
Ensembl chr17:28,225,831...28,240,210
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133
JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993
JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:36,223,429...36,242,187
Ensembl chr 5:36,670,854...36,728,993
JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:3,509,162...3,538,064
Ensembl chr2A:3,430,158...3,458,248
JBrowse link
G APIP APAF1 interacting protein involved_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr11:34,855,437...34,889,486
Ensembl chr11:34,730,671...34,764,732
JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:41,741,072...41,771,150
Ensembl chr 4:47,591,329...47,621,357
JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chr19:13,327,569...13,336,286
Ensembl chr19:14,060,859...14,067,222
JBrowse link
G MTAP methylthioadenosine phosphorylase involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr 9:21,637,543...21,769,698
Ensembl chr 9:22,266,376...22,382,218
JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000104 NCBI chr11:34,855,437...34,889,486
Ensembl chr11:34,730,671...34,764,732
JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 4:41,741,072...41,771,150
Ensembl chr 4:47,591,329...47,621,357
JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr19:13,327,569...13,336,286
Ensembl chr19:14,060,859...14,067,222
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098
JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr14:57,874,184...57,901,397
Ensembl chr14:77,075,814...77,086,530
JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr 3:117,735,772...117,790,096
Ensembl chr 3:124,646,431...124,700,733
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389
JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726
JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in ISO
IEA
RGD
TreeGrafter
PMID:4155291 GO_REF:0000118 RGD:5128604 NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667
JBrowse link
G TAT tyrosine aminotransferase involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886
JBrowse link
L-phenylalanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase ISO RGD PMID:16953590 RGD:1601531 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726
JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in ISO PMID:1465414 CAFA PMID:1465414 RGD:12792994 NCBI chr10:67,353,903...67,359,073
Ensembl chr10:69,878,773...69,881,174
JBrowse link
G SPR sepiapterin reductase acts_upstream_of_or_within ISO (PMID:16532389) MGI PMID:16532389 NCBI chr2A:72,939,621...72,944,669
Ensembl chr2A:74,433,056...74,438,105
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
G OAT ornithine aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr10:120,955,805...120,977,484
Ensembl chr10:125,224,032...125,245,504
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chr17:76,337,991...76,348,207
Ensembl chr17:82,040,824...82,045,686
JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chr 1:201,381,270...201,385,703
Ensembl chr 1:206,381,539...206,386,002
JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:140,356,586...140,362,972
Ensembl chr 8:143,371,748...143,378,032
JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100993185 putative phosphoserine phosphatase-like protein involved_in ISO (PMID:14673469) UniProt PMID:14673469 NCBI chr 7:56,351,434...56,376,714 JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:46,517,253...46,550,018
Ensembl chr 9:77,147,493...77,180,439
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:10457370 RGD:2300380 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G SDS serine dehydratase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839
JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:111,024,957...111,040,900
Ensembl chr12:114,406,738...114,422,347
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
JBrowse link
L-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837
JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G LOC100993185 putative phosphoserine phosphatase-like protein involved_in ISO (PMID:15291819) UniProt PMID:15291819 NCBI chr 7:56,351,434...56,376,714 JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19114063) Ensembl
MGI
PMID:19114063 GO_REF:0000107 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:46,517,253...46,550,018
Ensembl chr 9:77,147,493...77,180,439
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
JBrowse link
G SRR serine racemase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10557334), (PMID:12021263), (PMID:15710237), (PMID:16517698) Ensembl
MGI
PMID:10557334 PMID:12021263 PMID:15710237 PMID:16517698 GO_REF:0000107 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704
JBrowse link
leucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:141,562,798...141,631,388
Ensembl chr 5:147,578,042...147,646,834
JBrowse link
G LARS2 leucyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 3:45,296,129...45,455,836
Ensembl chr 3:46,405,636...46,564,994
JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:100,969,185...100,990,296
Ensembl chr11:104,452,913...104,474,063
JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
lysine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346
JBrowse link
lysyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KARS1 lysyl-tRNA synthetase 1 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
InterPro
PMID:7082655 PMID:7372681 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2303393 RGD:2303394 NCBI chr16:56,196,867...56,216,909
Ensembl chr16:75,545,002...75,565,043
JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCT dopachrome tautomerase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr13:75,590,366...75,730,956
Ensembl chr13:94,773,794...94,816,083
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:1,811,728...2,192,018
Ensembl chr15:25,181,386...25,523,774
JBrowse link
G SLC45A2 solute carrier family 45 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,357,549...76,398,571
Ensembl chr 5:81,743,254...81,784,565
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr2A:3,509,162...3,538,064
Ensembl chr2A:3,430,158...3,458,248
JBrowse link
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr11:34,855,437...34,889,486
Ensembl chr11:34,730,671...34,764,732
JBrowse link
G BHMT betaine--homocysteine S-methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15217352) RGD
MGI
UniProt
InterPro
PMID:15217352 PMID:15845641 GO_REF:0000002 GO_REF:0000117 RGD:1359026 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993
JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000117 NCBI chr 5:36,223,429...36,242,187
Ensembl chr 5:36,670,854...36,728,993
JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:41,741,072...41,771,150
Ensembl chr 4:47,591,329...47,621,357
JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:13,327,569...13,336,286
Ensembl chr19:14,060,859...14,067,222
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881
JBrowse link
G MTHFR methylenetetrahydrofolate reductase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15217352) MGI
TreeGrafter
PMID:15217352 GO_REF:0000118 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11158293) RGD
MGI
UniProt
Ensembl
InterPro
PMID:11158293 PMID:11730351 PMID:15845641 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1359026 RGD:1601423 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322
JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:76,677,815...76,697,512
Ensembl chr10:80,280,063...80,298,291
JBrowse link
methionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:3,509,162...3,538,064
Ensembl chr2A:3,430,158...3,458,248
JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17937387) Ensembl
MGI
PMID:17937387 GO_REF:0000107 NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881
JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:21121936 RGD:7207080 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946
JBrowse link
methionyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARS1 methionyl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:31,410,231...31,438,015
Ensembl chr12:31,668,708...31,693,839
JBrowse link
G MARS2 methionyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr2B:84,954,833...84,957,871
Ensembl chr2B:202,847,478...202,849,259
JBrowse link
mitochondrial alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,895,255...43,909,347
Ensembl chr 6:45,176,773...45,191,505
JBrowse link
mitochondrial asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,342,301...149,375,979
Ensembl chr 1:153,045,886...153,080,461
JBrowse link
mitochondrial glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GARS1 glycyl-tRNA synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:31,208,351...31,247,841
Ensembl chr 7:31,329,456...31,368,582
JBrowse link
mitochondrial seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARS2 seryl-tRNA synthetase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:36,015,983...36,037,404
Ensembl chr19:44,565,214...44,568,594
Ensembl chr19:44,565,214...44,568,594
Ensembl chr19:44,565,214...44,568,594
JBrowse link
mitochondrial tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WARS2 tryptophanyl tRNA synthetase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:83,405,595...83,515,718
Ensembl chr 1:118,402,385...118,516,099
JBrowse link
mitochondrial tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,463,086...53,493,352
Ensembl chr12:56,065,505...56,076,026
JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in ISO PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr 5:75,322,351...75,373,261
Ensembl chr 5:80,601,554...80,652,575
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATCAY ATCAY kinesin light chain interacting caytaxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,905,615...2,953,079
Ensembl chr19:3,854,423...3,900,175
JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAZ1 ornithine decarboxylase antizyme 1 ISO RGD PMID:8166639 RGD:401851045 NCBI chr19:1,279,139...1,283,079
Ensembl chr19:2,250,678...2,254,179
JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTC ornithine transcarbamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819
JBrowse link
ornithine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZIN2 antizyme inhibitor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16916800) Ensembl
MGI
PMID:16916800 GO_REF:0000107 NCBI chr 1:32,365,430...32,404,880
Ensembl chr 1:33,550,140...33,589,402
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536
JBrowse link
G OTC ornithine transcarbamylase ISO RGD PMID:4062872 RGD:2300098 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819
JBrowse link
G SLC25A2 solute carrier family 25 member 2 involved_in ISO (PMID:12948741) UniProt PMID:12948741 NCBI chr 5:136,664,485...136,666,344 JBrowse link
phenylalanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 6:5,096,453...5,608,362
Ensembl chr 6:5,387,291...5,792,749
JBrowse link
G FARSA phenylalanyl-tRNA synthetase subunit alpha involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr19:12,484,607...12,496,160
Ensembl chr19:13,227,193...13,238,244
JBrowse link
G FARSB phenylalanyl-tRNA synthetase subunit beta involved_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr2B:109,813,000...109,897,159
Ensembl chr2B:228,394,238...228,478,345
JBrowse link
G LRRC47 leucine rich repeat containing 47 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:2,451,747...2,468,043 JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase ISO RGD PMID:15779086 RGD:2289784 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA InterPro
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr17:76,337,991...76,348,207
Ensembl chr17:82,040,824...82,045,686
JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:201,381,270...201,385,703
Ensembl chr 1:206,381,539...206,386,002
JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 8:140,356,586...140,362,972
Ensembl chr 8:143,371,748...143,378,032
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065
JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:32,713,686...32,726,964
Ensembl chr19:41,462,735...41,476,308
JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 1:17,829,723...17,861,008
Ensembl chr 1:18,878,421...18,909,615
JBrowse link
proline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:17,829,723...17,861,008
Ensembl chr 1:18,878,421...18,909,615
JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:32,713,686...32,726,964
Ensembl chr19:41,462,735...41,476,308
JBrowse link
prolyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:195,537,319...195,618,257
Ensembl chr 1:200,575,259...200,656,197
JBrowse link
G PARS2 prolyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 1:54,032,594...54,040,274
Ensembl chr 1:55,622,726...55,624,750
JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:14,711,891...14,723,546
Ensembl chr 1:15,704,989...15,717,428
JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZIN1 antizyme inhibitor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:99,483,027...99,521,151
Ensembl chr 8:101,639,950...101,678,604
JBrowse link
G AZIN2 antizyme inhibitor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:32,365,430...32,404,880
Ensembl chr 1:33,550,140...33,589,402
JBrowse link
G ODC1 ornithine decarboxylase 1 involved_in ISO (MGI:5574513|PMID:24967154) UniProt PMID:24967154 MGI:5574513 NCBI chr2A:10,443,308...10,451,412
Ensembl chr2A:10,598,125...10,607,152
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC117978823 battenin involved_in ISO (MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:4830440
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase involved_in ISO (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chr 1:217,059,847...217,081,795
Ensembl chr 1:222,041,142...222,064,212
JBrowse link
G SLC7A7 solute carrier family 7 member 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17376816) Ensembl
TreeGrafter
MGI
PMID:17376816 GO_REF:0000107 GO_REF:0000118 NCBI chr14:3,590,781...3,637,588
Ensembl chr14:21,690,145...21,738,057
JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INS insulin involved_in ISO (PMID:3553851) BHF-UCL PMID:3553851 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17200146) MGI PMID:17200146 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO RGD PMID:19858196 RGD:6484536 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709
JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:24548853)
(PMID:21490221), (PMID:25429150)
MGI PMID:21490221 PMID:24548853 PMID:25429150 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,867,453...117,887,968
Ensembl chr12:121,241,112...121,261,777
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase acts_upstream_of_or_within ISO (PMID:12023972) RGD
MGI
PMID:11741948 PMID:12023972 RGD:730275 NCBI chr20:30,603,701...30,626,835
Ensembl chr20:31,738,007...31,760,803
JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAMT guanidinoacetate N-methyltransferase ISO RGD PMID:15533043 RGD:1359081 Ensembl chr19:1,371,312...1,375,461 JBrowse link
G GNMT glycine N-methyltransferase involved_in ISO
IEA
RGD
TreeGrafter
PMID:15347642 GO_REF:0000118 RGD:1359070 NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679
JBrowse link
G ICMT isoprenylcysteine carboxyl methyltransferase ISO RGD PMID:9192075 RGD:2289655 NCBI chr 1:4,987,384...5,002,213
Ensembl chr 1:6,246,570...6,258,746
JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:8263531 RGD:729481 NCBI chr 6:147,564,783...147,623,402 JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chr17:33,703,800...33,790,470
Ensembl chr17:38,651,024...38,737,202
JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARDH sarcosine dehydrogenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:104,786,774...104,864,480
Ensembl chr 9:133,398,806...133,473,642
JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNMT glycine N-methyltransferase involved_in ISO
IEA
RGD
TreeGrafter
PMID:18501206 GO_REF:0000118 RGD:7242952 NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679
JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100970229 selenide, water dikinase 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:170,058,006...170,060,257 JBrowse link
G SEPHS1 selenophosphate synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:13,316,013...13,347,087
Ensembl chr10:13,649,672...13,679,724
JBrowse link
G SEPHS2 selenophosphate synthetase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17346238) MGI
TreeGrafter
PMID:17346238 GO_REF:0000118 NCBI chr16:24,523,111...24,525,390 JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCLY selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr2B:125,276,540...125,331,057
Ensembl chr2B:244,144,105...244,181,767
JBrowse link
selenocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TXNRD1 thioredoxin reductase 1 ISO RGD PMID:10512699 RGD:634379 NCBI chr12:101,862,703...101,925,104
Ensembl chr12:105,187,128...105,321,112
JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881
JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr2A:87,303,022...87,319,494
Ensembl chr2A:89,212,442...89,228,446
JBrowse link
serine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt GO_REF:0000117 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881
JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30988181) Ensembl
MGI
PMID:30988181 GO_REF:0000107 NCBI chr  X:36,399,868...36,424,953
Ensembl chr  X:44,224,161...44,249,067
JBrowse link
G SRR serine racemase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15536068) Ensembl
MGI
PMID:15536068 GO_REF:0000107 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704
JBrowse link
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100988273 cytochrome P450 2D6-like ISO RGD PMID:23098818 RGD:11353778 NCBI chr22:23,022,449...23,031,627 JBrowse link
seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SARS1 seryl-tRNA synthetase 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:111,590,850...111,615,068
Ensembl chr 1:110,755,054...110,779,704
JBrowse link
G SARS2 seryl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr19:36,015,983...36,037,404
Ensembl chr19:44,565,214...44,568,594
Ensembl chr19:44,565,214...44,568,594
Ensembl chr19:44,565,214...44,568,594
JBrowse link
threonine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 NOT|acts_upstream_of_or_within ISO (PMID:17034760) MGI PMID:17034760 NCBI chr2A:87,303,022...87,319,494
Ensembl chr2A:89,212,442...89,228,446
JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr22:18,722,886...18,731,963
Ensembl chr22:36,554,067...36,563,429
JBrowse link
G LOC100990410 L-threonine 3-dehydrogenase, mitochondrial involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:7,837,080...7,855,179 JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:111,024,957...111,040,900
Ensembl chr12:114,406,738...114,422,347
JBrowse link
threonine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19114063) Ensembl
MGI
PMID:19114063 GO_REF:0000107 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
JBrowse link
threonyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARS1 threonyl-tRNA synthetase 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:76,874,096...76,901,208
Ensembl chr 5:82,256,706...82,286,179
JBrowse link
G TARS2 threonyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 1:125,832,693...125,852,918
Ensembl chr 1:129,480,824...129,501,639
JBrowse link
G TARS3 threonyl-tRNA synthetase 3 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr15:80,394,050...80,463,568
Ensembl chr15:99,667,608...99,737,300
JBrowse link
transsulfuration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase ISO RGD PMID:16636197 RGD:1600624 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666
JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO RGD PMID:17130129 RGD:9685559 NCBI chr22:17,933,995...17,944,196
Ensembl chr22:35,770,209...35,780,250
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5621260|PMID:23190757) BHF-UCL PMID:23190757 MGI:5621260 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881
JBrowse link
tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,342,301...149,375,979
Ensembl chr 1:153,045,886...153,080,461
JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:53,463,086...53,493,352
Ensembl chr12:56,065,505...56,076,026
JBrowse link
tRNA aminoacylation for mitochondrial protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,552,664...14,588,022
Ensembl chr16:23,774,123...23,809,873
JBrowse link
tRNA aminoacylation for protein translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARS2 cysteinyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr13:91,776,774...91,843,262
Ensembl chr13:110,892,948...110,957,000
JBrowse link
G DARS2 aspartyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:149,342,301...149,375,979
Ensembl chr 1:153,045,886...153,080,461
JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:195,537,319...195,618,257
Ensembl chr 1:200,575,259...200,656,197