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ONTOLOGY REPORT - ANNOTATIONS


Term:protein deglycosylation
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Accession:GO:0006517 term browser browse the term
Definition:The removal of sugar residues from a glycosylated protein.
Synonyms:exact_synonym: glycoprotein deglycosylation


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protein deglycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aga aspartylglucosaminidase involved_in ISO
IBA
(PMID:1281977), (PMID:1904874)
PMID:21873635
RGD PMID:1281977 PMID:1904874, PMID:21873635 RGD:13792537 NCBI chr16:41,222,225...41,234,169
Ensembl chr16:41,222,238...41,234,095
JBrowse link
G Engase endo-beta-N-acetylglucosaminidase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5615299|PMID:25605922)
RGD PMID:25605922, PMID:21873635 MGI:5615299, RGD:13792537 NCBI chr10:107,502,636...107,515,300
Ensembl chr10:107,502,695...107,515,371
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677
JBrowse link
G Man2a2 mannosidase, alpha, class 2A, member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:142,141,695...142,164,561
Ensembl chr 1:142,143,799...142,164,263
JBrowse link
G Ngly1 N-glycanase 1 involved_in ISO
IBA
UniProtKB:Q02890 (PMID:28826503)
PMID:21873635
RGD PMID:28826503, PMID:21873635 RGD:13792537 NCBI chr15:10,405,453...10,455,973
Ensembl chr15:10,405,164...10,455,956
JBrowse link
G Oga O-GlcNAcase involved_in ISO
IEA
(PMID:11148210)
GO_REF:0000107
RGD
Ensembl
PMID:11148210 GO_REF:0000107 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
G Park7 Parkinsonism associated deglycase NOT|involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27903648)
(PMID:25416785), (PMID:26995087), (PMID:30894531)
UniProt
Ensembl
RGD
PMID:25416785 PMID:26995087 PMID:27903648 PMID:30894531 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
endoplasmic reticulum mannose trimming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:69,135,095...69,197,708
Ensembl chr13:69,135,128...69,199,511
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:18003979) RGD PMID:18003979 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 4:140,886,644...140,918,654
Ensembl chr 4:140,886,545...140,915,779
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:151,232,741...151,258,559
Ensembl chr 3:151,232,751...151,258,580
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(MGI:3654428|PMID:16431915)
RGD PMID:16431915 PMID:25092655 MGI:3654428 NCBI chr13:69,135,095...69,197,708
Ensembl chr13:69,135,128...69,199,511
JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 involved_in ISO (PMID:27108681) RGD PMID:27108681 NCBI chr20:35,257,688...35,450,132
Ensembl chr20:35,257,985...35,450,513
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:18003979), (PMID:21062743) RGD PMID:18003979 PMID:21062743 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
protein alpha-1,2-demannosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:10521544), (PMID:22160784) RGD PMID:10521544 PMID:22160784 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
trimming of terminal mannose on B branch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:151,232,741...151,258,559
Ensembl chr 3:151,232,751...151,258,580
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:10521544), (PMID:18003979) RGD PMID:10521544 PMID:18003979 NCBI chr 3:2,547,259...2,569,051
Ensembl chr 3:2,547,986...2,569,049
JBrowse link
trimming of terminal mannose on C branch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (MGI:5645205|PMID:20065073) RGD PMID:20065073 MGI:5645205 NCBI chr 4:140,886,644...140,918,654
Ensembl chr 4:140,886,545...140,915,779
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    cellular process 18343
      cellular metabolic process 10755
        cellular macromolecule metabolic process 8243
          glycoprotein metabolic process 358
            protein deglycosylation 12
              protein deglycosylation involved in glycoprotein catabolic process + 5
              protein demannosylation + 5
Path 2
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      organic substance metabolic process 11337
        organonitrogen compound metabolic process 6803
          protein metabolic process 5893
            cellular protein metabolic process 5230
              cellular protein modification process 3614
                protein deglycosylation 12
                  protein deglycosylation involved in glycoprotein catabolic process + 5
                  protein demannosylation + 5
paths to the root