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ONTOLOGY REPORT - ANNOTATIONS

Term:N-glycan processing
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Accession:GO:0006491 term browser browse the term
Definition:The conversion of N-linked glycan (N = nitrogen) structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking.
Synonyms:exact_synonym: N-linked glycoprotein maturation
 narrow_synonym: glycoprotein trimming involved in glycoprotein maturation
 alt_id: GO:0006492


show annotations for term's descendants           Sort by:
N-glycan processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Engase endo-beta-N-acetylglucosaminidase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,707,169...103,719,833
Ensembl chr10:103,707,169...103,719,819 		JBrowse link
G Fut8 fucosyltransferase 8 acts_upstream_of_or_within ISO
IEA		 (PMID:24619415)
GO_REF:0000107		 RGD
Ensembl		 PMID:24619415 GO_REF:0000107 NCBI chr 6:101,682,354...101,909,784
Ensembl chr 6:95,949,991...96,176,677 		JBrowse link
G Ganab glucosidase II alpha subunit involved_in ISO
IBA
IEA		 (PMID:10929008)
GO_REF:0000033
(PMID:27462106)
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10929008 PMID:27462106 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:205,793,910...205,813,704
Ensembl chr 1:205,793,895...205,813,695 		JBrowse link
G Ganc glucosidase, alpha; neutral C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:107,353,369...107,406,104
Ensembl chr 3:107,353,369...107,405,241 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:68,832,524...68,857,462
Ensembl chr 8:59,936,660...59,962,013 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO		 PMID:1885615
GO_REF:0000033
MGI:2150656 (PMID:16754854)		 GO_Central
RGD		 PMID:16754854 PMID:1885615 GO_REF:0000033, RGD:38501079 NCBI chr 9:111,698,913...111,855,257
Ensembl chr 9:104,252,001...104,408,349 		JBrowse link
G Man2a2 mannosidase, alpha, class 2A, member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:134,304,714...134,327,611
Ensembl chr 1:134,306,236...134,327,315 		JBrowse link
G Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A involved_in ISS
ISO		 GO_REF:0000024
(PMID:16377570)		 UniProt
RGD		 PMID:16377570 GO_REF:0000024 NCBI chr 9:39,673,427...39,786,747
Ensembl chr 9:39,673,430...39,766,890 		JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II involved_in ISO
IBA		 (PMID:10929008)
GO_REF:0000033		 RGD
GO_Central		 PMID:10929008 GO_REF:0000033 NCBI chr 8:28,810,836...28,822,503
Ensembl chr 8:20,534,880...20,546,492 		JBrowse link
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:177,513,966...177,651,553
Ensembl chr 4:175,789,947...175,920,708 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO
IBA
IEA		 (PMID:10766765)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10766765 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO
IBA
IEA		 (PMID:10766765), (PMID:26192331)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10766765 PMID:26192331 GO_REF:0000033 GO_REF:0000107 NCBI chr18:57,754,349...57,760,839
Ensembl chr18:57,754,347...57,760,839 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO
IBA
IEA		 (PMID:10766765)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10766765 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:103,437,479...103,532,008
Ensembl chr 9:95,993,503...96,084,653 		JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:70,736,395...70,802,537
Ensembl chr18:70,736,602...70,797,789 		JBrowse link
N-glycan processing to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta involved_in ISO
IBA
IEA		 (PMID:19938078), (PMID:25505245)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:19938078 PMID:25505245 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:22,800,502...22,866,336
Ensembl chr 7:22,800,485...22,866,933 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        carbohydrate derivative metabolic process 1065
          glycoprotein metabolic process 399
            N-glycan processing 16
              Golgi apparatus mannose trimming 0
              N-glycan diversification 0
              N-glycan processing to lysosome 1
              N-glycan processing to secreted and cell-surface N-glycans 0
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        macromolecule metabolic process 10018
          protein metabolic process 5227
            glycoprotein metabolic process 399
              N-glycan processing 16
                Golgi apparatus mannose trimming 0
                N-glycan diversification 0
                N-glycan processing to lysosome 1
                N-glycan processing to secreted and cell-surface N-glycans 0
paths to the root