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ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide-lipid intermediate biosynthetic process
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Accession:GO:0006490 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of an oligosaccharide-lipid intermediate, such as a molecule of dolichol-P-man or dolicol-P-Glc used in N-linked glycosylation.
Synonyms:narrow_synonym: oligosaccharide-lipid intermediate assembly



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oligosaccharide-lipid intermediate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg11 ALG11, alpha-1,2-mannosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:69,940,540...69,951,617
Ensembl chr16:69,944,349...69,951,601
JBrowse link
G Alg2 ALG2, alpha-1,3/1,6-mannosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,768,738...61,773,297
Ensembl chr 5:61,768,740...61,773,297
JBrowse link
G Alg6 ALG6, alpha-1,3-glucosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:114,404,972...114,454,440
Ensembl chr 5:114,405,010...114,454,439
JBrowse link
G Alg8 ALG8, alpha-1,3-glucosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:151,684,344...151,704,310
Ensembl chr 1:151,684,396...151,704,302
JBrowse link
dolichol-linked oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:121,335,042...121,340,308
Ensembl chr 7:121,335,042...121,340,308
JBrowse link
G Alg12 ALG12, alpha-1,6-mannosyltransferase acts_upstream_of_or_within ISO (PMID:11983712) RGD PMID:11983712 NCBI chr 7:119,895,112...119,909,488
Ensembl chr 7:119,895,120...119,909,458
JBrowse link
G Alg13 ALG13, UDP-N-acetylglucosaminyltransferase subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:107,885,039...107,906,264
Ensembl chr  X:107,885,064...107,893,002
JBrowse link
G Alg14 ALG14, UDP-N-acetylglucosaminyltransferase subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:209,368,285...209,445,425
Ensembl chr 2:209,368,312...209,445,431
JBrowse link
G Alg2 ALG2, alpha-1,3/1,6-mannosyltransferase involved_in ISO UniProtKB:P43636 (PMID:12684507) RGD PMID:12684507 NCBI chr 5:61,768,738...61,773,297
Ensembl chr 5:61,768,740...61,773,297
JBrowse link
G Alg6 ALG6, alpha-1,3-glucosyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:114,404,972...114,454,440
Ensembl chr 5:114,405,010...114,454,439
JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 involved_in IDA
ISO
(PMID:29459785) RGD PMID:29459785 PMID:8280061 RGD:1624315 NCBI chr 8:44,664,055...44,671,102
Ensembl chr 8:44,664,071...44,671,087
JBrowse link
G LOC108349244 putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:107,906,320...107,968,232
Ensembl chr  X:107,885,093...107,942,695
JBrowse link
G Mpdu1 mannose-P-dolichol utilization defect 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:54,374,719...54,380,301
Ensembl chr10:54,374,725...54,380,447
JBrowse link
G Rft1 RFT1 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:5,827,063...5,861,120
Ensembl chr16:5,827,088...5,861,120
JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:4821529|PMID:20637498)
GO_REF:0000104
(PMID:20637498)
PMID:21873635
UniProt
RGD
PMID:20637498 PMID:21873635 GO_REF:0000024 GO_REF:0000104 MGI:4821529, RGD:13792537 NCBI chr14:32,046,415...32,060,796
Ensembl chr14:32,046,408...32,060,747
JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) RGD PMID:28842490 NCBI chr 5:146,198,359...146,224,479
Ensembl chr 5:146,197,457...146,224,454
JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:44,664,055...44,671,102
Ensembl chr 8:44,664,071...44,671,087
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) RGD PMID:28842490 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19391
    cellular process 18252
      cellular metabolic process 10655
        cellular lipid metabolic process 1021
          oligosaccharide-lipid intermediate biosynthetic process 15
            dolichol-linked oligosaccharide biosynthetic process + 13
Path 2
Term Annotations click to browse term
  biological_process 19391
    metabolic process 11735
      biosynthetic process 6020
        organic substance biosynthetic process 5918
          carbohydrate derivative biosynthetic process 577
            oligosaccharide-lipid intermediate biosynthetic process 15
              dolichol-linked oligosaccharide biosynthetic process + 13
paths to the root