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ONTOLOGY REPORT - ANNOTATIONS

Term:oligosaccharide-lipid intermediate biosynthetic process
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Accession:GO:0006490 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of an oligosaccharide-lipid intermediate, such as a molecule of dolichol-P-man or dolicol-P-Glc used in N-linked glycosylation.
Synonyms:narrow_synonym: oligosaccharide-lipid intermediate assembly


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oligosaccharide-lipid intermediate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg11 ALG11, alpha-1,2-mannosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:69,940,540...69,951,617
Ensembl chr16:69,944,349...69,951,601 		JBrowse link
G Alg2 ALG2, alpha-1,3/1,6-mannosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,768,738...61,773,297
Ensembl chr 5:61,768,740...61,773,297 		JBrowse link
G Alg6 ALG6, alpha-1,3-glucosyltransferase involved_in IBA
IEA		 PMID:21873635
GO_REF:0000108		 GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 5:114,404,972...114,454,440
Ensembl chr 5:114,405,010...114,454,439 		JBrowse link
G Alg8 ALG8, alpha-1,3-glucosyltransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:151,684,344...151,704,310
Ensembl chr 1:151,684,396...151,704,302 		JBrowse link
dolichol-linked oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase involved_in ISO (PMID:14973778) RGD PMID:14973778 NCBI chr10:10,346,541...10,356,779
Ensembl chr10:10,346,536...10,356,750 		JBrowse link
G Alg10 ALG10, alpha-1,2-glucosyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:121,335,042...121,340,308
Ensembl chr 7:121,335,042...121,340,308 		JBrowse link
G Alg12 ALG12, alpha-1,6-mannosyltransferase acts_upstream_of_or_within ISO (PMID:11983712) RGD PMID:11983712 NCBI chr 7:119,895,112...119,909,488
Ensembl chr 7:119,895,120...119,909,458 		JBrowse link
G Alg13 ALG13, UDP-N-acetylglucosaminyltransferase subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:107,885,039...107,906,264
Ensembl chr  X:107,885,064...107,893,002 		JBrowse link
G Alg14 ALG14, UDP-N-acetylglucosaminyltransferase subunit involved_in IBA
IEA		 PMID:21873635
GO_REF:0000002		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:209,368,285...209,445,425
Ensembl chr 2:209,368,312...209,445,431 		JBrowse link
G Alg2 ALG2, alpha-1,3/1,6-mannosyltransferase involved_in ISO UniProtKB:P43636 (PMID:12684507) RGD PMID:12684507 NCBI chr 5:61,768,738...61,773,297
Ensembl chr 5:61,768,740...61,773,297 		JBrowse link
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 involved_in IDA
ISO		 (PMID:29459785) RGD PMID:29459785 PMID:8280061 RGD:1624315 NCBI chr 8:44,664,055...44,671,102
Ensembl chr 8:44,664,071...44,671,087 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:156,919,979...156,939,522
Ensembl chr 3:156,919,979...156,939,536 		JBrowse link
G Mpdu1 mannose-P-dolichol utilization defect 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:54,374,719...54,380,301
Ensembl chr10:54,374,725...54,380,447 		JBrowse link
G Rft1 RFT1 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:5,827,063...5,861,120
Ensembl chr16:5,827,088...5,861,120 		JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000104
(PMID:20637498)
PMID:21873635
GO_REF:0000024
(MGI:4821529|PMID:20637498)		 UniProt
RGD		 PMID:20637498 PMID:21873635 GO_REF:0000024 GO_REF:0000104 MGI:4821529, RGD:13792537 NCBI chr14:32,046,415...32,060,796
Ensembl chr14:32,046,408...32,060,747 		JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466) RGD PMID:28842490 PMID:32817466 NCBI chr 5:146,198,359...146,224,479
Ensembl chr 5:146,197,457...146,224,454 		JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466) RGD PMID:28842490 PMID:32817466 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    cellular process 18159
      cellular metabolic process 9531
        cellular lipid metabolic process 1050
          oligosaccharide-lipid intermediate biosynthetic process 16
            dolichol-linked oligosaccharide biosynthetic process + 13
Path 2
Term Annotations click to browse term
  biological_process 19746
    metabolic process 12044
      biosynthetic process 6264
        organic substance biosynthetic process 6173
          carbohydrate derivative biosynthetic process 644
            oligosaccharide-lipid intermediate biosynthetic process 16
              dolichol-linked oligosaccharide biosynthetic process + 13
paths to the root