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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA localization
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Accession:GO:0006403 term browser browse the term
Definition:A process in which RNA is transported to, or maintained in, a specific location.
Synonyms:exact_synonym: RNA localisation;   establishment and maintenance of RNA localization

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show annotations for term's descendants           Sort by:
RNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:14614102 RGD:1299544 NCBI chrNW_004936490:12,430,343...12,468,794
Ensembl chrNW_004936490:12,430,008...12,469,083 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20797886) MGI
Ensembl		 PMID:20797886 GO_REF:0000107 NCBI chrNW_004936514:11,175,410...11,220,928
Ensembl chrNW_004936514:11,175,526...11,220,241 		JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within ISO (PMID:21729784) MGI PMID:21729784 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
dsRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071 		JBrowse link
G Rftn1 raftlin, lipid raft linker 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21266579) MGI
Ensembl		 PMID:21266579 GO_REF:0000107 NCBI chrNW_004936473:9,119,234...9,317,696
Ensembl chrNW_004936473:9,117,247...9,317,704 		JBrowse link
G Rftn2 raftlin family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21266579) Ensembl
MGI		 PMID:21266579 GO_REF:0000107 NCBI chrNW_004936506:1,561,910...1,620,476
Ensembl chrNW_004936506:1,561,801...1,621,789 		JBrowse link
establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211 		JBrowse link
G Atr ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898 		JBrowse link
intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caprin1 cell cycle associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20861386) Ensembl
MGI		 PMID:20861386 GO_REF:0000107 NCBI chrNW_004936533:3,913,375...3,953,551
Ensembl chrNW_004936533:3,913,375...3,952,851 		JBrowse link
G Casc3 CASC3 exon junction complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12843282) Ensembl
MGI		 PMID:12843282 GO_REF:0000107 NCBI chrNW_004936490:15,251,132...15,278,264
Ensembl chrNW_004936490:15,251,110...15,278,732 		JBrowse link
G Fubp3 far upstream element binding protein 3 ISO RGD PMID:23121659 RGD:12792285 NCBI chrNW_004936487:17,586,878...17,638,028
Ensembl chrNW_004936487:17,586,833...17,638,032 		JBrowse link
G Kif5c kinesin family member 5C ISO RGD PMID:23121659 RGD:12792285 NCBI chrNW_004936469:28,282,921...28,431,638
Ensembl chrNW_004936469:28,280,095...28,431,695 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:13,901,066...14,000,652
Ensembl chrNW_004936489:13,901,754...13,999,983 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12843282) MGI
TreeGrafter		 PMID:12843282 GO_REF:0000118 NCBI chrNW_004936514:5,058,682...5,103,493
Ensembl chrNW_004936514:5,058,692...5,103,528 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936648:2,172,263...2,470,494
Ensembl chrNW_004936648:2,171,957...2,469,869 		JBrowse link
G Znf385a zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16286649) Ensembl
MGI		 PMID:16286649 GO_REF:0000107 NCBI chrNW_004936512:11,562,635...11,585,026
Ensembl chrNW_004936512:11,561,435...11,585,402 		JBrowse link
miRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:24356509) UniProt PMID:24356509 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430 		JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:27559612) UniProt PMID:27559612 NCBI chrNW_004936474:24,026,459...24,047,724
Ensembl chrNW_004936474:24,026,377...24,047,724 		JBrowse link
mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936741:1,729,707...1,756,108
Ensembl chrNW_004936741:1,729,679...1,757,419 		JBrowse link
G Alyref Aly/REF export factor involved_in ISO (PMID:17190602), (PMID:25662211) UniProt PMID:17190602 PMID:25662211 NCBI chrNW_004936594:5,398,973...5,402,846 JBrowse link
G Chtop chromatin target of PRMT1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,436,260...3,444,522
Ensembl chrNW_004936580:3,434,773...3,445,080 		JBrowse link
G Ddx25 DEAD-box helicase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:6,301,347...6,322,640
Ensembl chrNW_004936572:6,301,347...6,321,542 		JBrowse link
G Ddx39a DExD-box helicase 39A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936659:2,973,340...2,981,973
Ensembl chrNW_004936659:2,972,420...2,980,919 		JBrowse link
G Ddx39b DExD-box helicase 39B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936727:1,968,032...1,980,789
Ensembl chrNW_004936727:1,968,094...1,980,785 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,922,457...3,964,721
Ensembl chrNW_004936520:3,922,339...3,960,359 		JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936470:35,634,650...35,649,683
Ensembl chrNW_004936470:35,639,024...35,649,725 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Fyttd1 forty-two-three domain containing 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936784:344,564...370,088
Ensembl chrNW_004936784:344,574...370,056 		JBrowse link
G Hhex hematopoietically expressed homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO PMID:9578590
PMID:10567417
(PMID:10567417)		 UniProt PMID:9578590 PMID:10567417 RGD:9685424 RGD:9685477 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936778:273,152...318,157
Ensembl chrNW_004936778:273,909...319,232 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936524:6,429,735...6,465,035
Ensembl chrNW_004936524:6,429,185...6,465,035 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:21326824) ComplexPortal PMID:21326824 NCBI chrNW_004936833:920,683...928,047
Ensembl chrNW_004936833:920,674...928,047 		JBrowse link
G Ncbp3 nuclear cap binding subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:460,237...493,634
Ensembl chrNW_004936677:462,868...488,212 		JBrowse link
G Nup107 nucleoporin 107 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936545:6,600,124...6,642,839
Ensembl chrNW_004936545:6,600,088...6,642,870 		JBrowse link
G Nup133 nucleoporin 133 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,185,558...20,230,904
Ensembl chrNW_004936484:20,185,584...20,231,352 		JBrowse link
G Nup155 nucleoporin 155 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19070573) Ensembl
MGI		 PMID:19070573 GO_REF:0000107 NCBI chrNW_004936518:4,635,970...4,688,669
Ensembl chrNW_004936518:4,635,869...4,690,943 		JBrowse link
G Nup160 nucleoporin 160 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,435,938...1,491,439
Ensembl chrNW_004936562:1,435,973...1,490,890 		JBrowse link
G Nup214 nucleoporin 214 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8896451) Ensembl
MGI		 PMID:8896451 GO_REF:0000107 NCBI chrNW_004936487:17,981,402...18,067,828
Ensembl chrNW_004936487:17,981,304...18,067,854 		JBrowse link
G Nup85 nucleoporin 85 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:503,698...531,851
Ensembl chrNW_004936594:503,720...531,875 		JBrowse link
G Nup88 nucleoporin 88 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936677:2,385,289...2,417,398
Ensembl chrNW_004936677:2,385,289...2,421,783 		JBrowse link
G Nxf1 nuclear RNA export factor 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936581:488,691...501,323
Ensembl chrNW_004936581:488,718...504,853 		JBrowse link
G Nxf3 nuclear RNA export factor 3 involved_in ISO (PMID:11545741) UniProt PMID:11545741 NCBI chrNW_004936547:8,066,413...8,084,756 JBrowse link
G Nxf5 nuclear RNA export factor 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936813:733,393...874,254 JBrowse link
G Nxt1 nuclear transport factor 2 like export factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936620:2,243,181...2,246,244
Ensembl chrNW_004936620:2,243,210...2,246,119 		JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:2,780,110...2,782,775
Ensembl chrNW_004936529:2,780,110...2,782,455 		JBrowse link
G Sarnp SAP domain containing ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:226,333...280,562
Ensembl chrNW_004936646:232,356...280,589 		JBrowse link
G Sem1 SEM1 26S proteasome subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936585:3,727,199...3,747,873
Ensembl chrNW_004936585:3,727,126...3,750,473 		JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:28984244) UniProt PMID:28984244 NCBI chrNW_004936476:22,790,411...22,799,498
Ensembl chrNW_004936476:22,790,411...22,799,452 		JBrowse link
G Thoc1 THO complex 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936550:590,119...638,152
Ensembl chrNW_004936550:590,058...641,390 		JBrowse link
G Thoc2 THO complex 2 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:6,855,405...6,972,256
Ensembl chrNW_004936479:6,855,411...6,972,256 		JBrowse link
G Thoc3 THO complex 3 involved_in ISO (PMID:17190602) UniProt PMID:17190602 NCBI chrNW_004936597:433,865...436,852 JBrowse link
G Thoc5 THO complex subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936657:3,465,707...3,503,966
Ensembl chrNW_004936657:3,461,789...3,503,976 		JBrowse link
G Thoc6 THO complex subunit 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936694:1,144,122...1,147,345
Ensembl chrNW_004936694:1,143,345...1,147,345 		JBrowse link
G Thoc7 THO complex subunit 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936637:2,569,261...2,575,653
Ensembl chrNW_004936637:2,569,078...2,575,269 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
G Xpo1 exportin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:6,921,753...6,962,062
Ensembl chrNW_004936491:6,921,319...6,962,343 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936582:130,593...161,275
Ensembl chrNW_004936582:126,736...161,586 		JBrowse link
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpr translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
mRNA localization resulting in post-transcriptional regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor acts_upstream_of_or_within ISO (PMID:20541607) MGI PMID:20541607 NCBI chrNW_004936735:2,130,943...2,177,815 JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chrNW_004936562:2,269,341...2,369,098
Ensembl chrNW_004936562:2,269,332...2,371,224 		JBrowse link
G Znf385a zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16286649) Ensembl
TreeGrafter
MGI		 PMID:16286649 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:11,562,635...11,585,026
Ensembl chrNW_004936512:11,561,435...11,585,402 		JBrowse link
mRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arc activity regulated cytoskeleton associated protein involved_in ISO PMID:29328916 UniProt PMID:29328916 RGD:13514080 NCBI chrNW_004936470:9,185,145...9,188,260
Ensembl chrNW_004936470:9,185,145...9,186,320 		JBrowse link
G Casc3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:15,251,132...15,278,264
Ensembl chrNW_004936490:15,251,110...15,278,732 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:12629046 RGD:9685156 NCBI chrNW_004936483:17,216,288...17,296,430
Ensembl chrNW_004936483:17,216,213...17,294,534 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936594:4,148,401...4,160,290
Ensembl chrNW_004936594:4,147,685...4,160,293 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936520:3,922,457...3,964,721
Ensembl chrNW_004936520:3,922,339...3,960,359 		JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936470:35,634,650...35,649,683
Ensembl chrNW_004936470:35,639,024...35,649,725 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Gle1 GLE1 RNA export mediator involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936487:16,031,832...16,063,779
Ensembl chrNW_004936487:16,031,824...16,063,803 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381 		JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:11886857 RGD:625404 NCBI chrNW_004936509:6,576,933...6,585,734
Ensembl chrNW_004936509:6,577,001...6,581,934 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:12,430,343...12,468,794
Ensembl chrNW_004936490:12,430,008...12,469,083 		JBrowse link
G Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936578:4,070,997...4,222,661
Ensembl chrNW_004936578:4,070,955...4,222,427 		JBrowse link
G Igf2bp3 insulin like growth factor 2 mRNA binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936478:456,369...595,705
Ensembl chrNW_004936478:458,871...595,742 		JBrowse link
G Kif5c kinesin family member 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:28,282,921...28,431,638
Ensembl chrNW_004936469:28,280,095...28,431,695 		JBrowse link
G LOC101963985 heterogeneous nuclear ribonucleoproteins A2/B1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:10,703,450...10,742,975 JBrowse link
G LOC101966195 huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071 		JBrowse link
G LOC101970638 heterogeneous nuclear ribonucleoproteins A2/B1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936503:12,298,622...12,299,633 JBrowse link
G LOC101977351 heterogeneous nuclear ribonucleoproteins A2/B1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936859:709,392...710,609 JBrowse link
G Mapt microtubule associated protein tau ISO RGD PMID:25847153 RGD:11061097 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936524:6,429,735...6,465,035
Ensembl chrNW_004936524:6,429,185...6,465,035 		JBrowse link
G Ndc1 NDC1 transmembrane nucleoporin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936522:7,303,366...7,353,700
Ensembl chrNW_004936522:7,302,776...7,355,794 		JBrowse link
G Nup107 nucleoporin 107 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936545:6,600,124...6,642,839
Ensembl chrNW_004936545:6,600,088...6,642,870 		JBrowse link
G Nup188 nucleoporin 188 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936487:16,408,523...16,462,916
Ensembl chrNW_004936487:16,408,518...16,462,923 		JBrowse link
G Nup35 nucleoporin 35 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936509:11,681,038...11,798,620
Ensembl chrNW_004936509:11,681,099...11,726,739 		JBrowse link
G Nup58 nucleoporin 58 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936688:986,037...1,025,351
Ensembl chrNW_004936688:985,746...1,025,407 		JBrowse link
G Nup85 nucleoporin 85 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936594:503,698...531,851
Ensembl chrNW_004936594:503,720...531,875 		JBrowse link
G Nup88 nucleoporin 88 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936677:2,385,289...2,417,398
Ensembl chrNW_004936677:2,385,289...2,421,783 		JBrowse link
G Nup93 nucleoporin 93 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936475:8,930,320...9,027,840
Ensembl chrNW_004936475:8,930,314...9,032,287 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936498:1,112,724...1,219,790
Ensembl chrNW_004936498:1,112,663...1,220,634 		JBrowse link
G Nutf2 nuclear transport factor 2 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936475:18,214,593...18,232,406
Ensembl chrNW_004936475:18,214,267...18,232,442 		JBrowse link
G Nxf1 nuclear RNA export factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936581:488,691...501,323
Ensembl chrNW_004936581:488,718...504,853 		JBrowse link
G Nxf5 nuclear RNA export factor 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936813:733,393...874,254 JBrowse link
G Nxt1 nuclear transport factor 2 like export factor 1 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936620:2,243,181...2,246,244
Ensembl chrNW_004936620:2,243,210...2,246,119 		JBrowse link
G Nxt2 nuclear transport factor 2 like export factor 2 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936499:5,604,376...5,610,972
Ensembl chrNW_004936499:5,603,805...5,611,029 		JBrowse link
G Peg10 paternally expressed 10 involved_in ISO (MGI:6828898|PMID:34413232) UniProt PMID:34413232 MGI:6828898 NCBI chrNW_004936585:5,437,807...5,451,185
Ensembl chrNW_004936585:5,441,493...5,443,868 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:13,901,066...14,000,652
Ensembl chrNW_004936489:13,901,754...13,999,983 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936867:666,208...667,851
Ensembl chrNW_004936867:666,199...667,828 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936602:3,013,490...3,030,489
Ensembl chrNW_004936602:3,013,337...3,030,486 		JBrowse link
G Slbp stem-loop histone mRNA binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:21,672,143...21,680,899
Ensembl chrNW_004936477:21,671,842...21,680,915 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,251,148...2,253,527
Ensembl chrNW_004936661:2,250,665...2,253,787 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536 		JBrowse link
negative regulation of establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chrNW_004936648:1,809,395...1,835,890 JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup153 nucleoporin 153 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936552:3,529,506...3,588,830
Ensembl chrNW_004936552:3,530,559...3,577,177 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH12orf50 chromosome unknown C12orf50 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936507:5,175,266...5,207,462
Ensembl chrNW_004936507:5,175,266...5,207,462 		JBrowse link
G Ddx25 DEAD-box helicase 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936572:6,301,347...6,322,640
Ensembl chrNW_004936572:6,301,347...6,321,542 		JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:35,634,650...35,649,683
Ensembl chrNW_004936470:35,639,024...35,649,725 		JBrowse link
G Gle1 GLE1 RNA export mediator involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936487:16,031,832...16,063,779
Ensembl chrNW_004936487:16,031,824...16,063,803 		JBrowse link
G Hhex hematopoietically expressed homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:43,766,699...43,805,919
Ensembl chrNW_004936469:43,766,663...43,808,333 		JBrowse link
G LOC101958629 ATP-dependent RNA helicase DDX19A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:23,206,224...23,233,316
Ensembl chrNW_004936475:23,205,284...23,233,505 		JBrowse link
G LOC101959289 ATP-dependent RNA helicase DDX19B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:23,239,925...23,263,769
Ensembl chrNW_004936475:23,239,925...23,267,037 		JBrowse link
G LOC101973872 bcl-2-like protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:1,039,970...1,044,942
Ensembl chrNW_004936722:1,053,326...1,059,477
Ensembl chrNW_004936722:1,053,326...1,059,477 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:273,152...318,157
Ensembl chrNW_004936778:273,909...319,232 		JBrowse link
G Nup133 nucleoporin 133 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:20,185,558...20,230,904
Ensembl chrNW_004936484:20,185,584...20,231,352 		JBrowse link
G Nup93 nucleoporin 93 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:8,930,320...9,027,840
Ensembl chrNW_004936475:8,930,314...9,032,287 		JBrowse link
G Nxf1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15820316) Ensembl
TreeGrafter
MGI		 PMID:15820316 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:488,691...501,323
Ensembl chrNW_004936581:488,718...504,853 		JBrowse link
G Nxf3 nuclear RNA export factor 3 acts_upstream_of_or_within ISO (PMID:15820316) MGI PMID:15820316 NCBI chrNW_004936547:8,066,413...8,084,756 JBrowse link
G Nxf5 nuclear RNA export factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15820316) MGI
TreeGrafter		 PMID:15820316 GO_REF:0000118 NCBI chrNW_004936813:733,393...874,254 JBrowse link
G Nxt1 nuclear transport factor 2 like export factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936620:2,243,181...2,246,244
Ensembl chrNW_004936620:2,243,210...2,246,119 		JBrowse link
G Nxt2 nuclear transport factor 2 like export factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:5,604,376...5,610,972
Ensembl chrNW_004936499:5,603,805...5,611,029 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936472:440,440...464,116
Ensembl chrNW_004936472:446,712...465,039 		JBrowse link
G Poldip3 DNA polymerase delta interacting protein 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936718:516,609...538,275
Ensembl chrNW_004936718:515,200...536,802 		JBrowse link
G Sarnp SAP domain containing ribonucleoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:226,333...280,562
Ensembl chrNW_004936646:232,356...280,589 		JBrowse link
G Thoc2 THO complex 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,855,405...6,972,256
Ensembl chrNW_004936479:6,855,411...6,972,256 		JBrowse link
G Zc3h11a zinc finger CCCH-type containing 11A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936567:863,295...901,837 JBrowse link
positive regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chrNW_004936519:1,946,684...1,987,036
Ensembl chrNW_004936519:1,946,652...1,987,070 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,251,148...2,253,527
Ensembl chrNW_004936661:2,250,665...2,253,787 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536 		JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:7,045,043...7,077,710
Ensembl chrNW_004936545:7,045,043...7,077,736 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:6,896,487...6,934,938
Ensembl chrNW_004936481:6,896,359...6,935,623 		JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,088,815...15,131,048
Ensembl chrNW_004936474:15,088,816...15,118,310 		JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:17,473,787...17,519,278
Ensembl chrNW_004936488:17,473,607...17,519,536 		JBrowse link
positive regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cct2 chaperonin containing TCP1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:7,416,257...7,436,024
Ensembl chrNW_004936545:7,415,753...7,439,800 		JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936580:5,537,338...5,554,384
Ensembl chrNW_004936580:5,537,015...5,554,384 		JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:7,224,989...7,241,348
Ensembl chrNW_004936491:7,224,692...7,241,358 		JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936643:2,354,799...2,368,048
Ensembl chrNW_004936643:2,354,799...2,368,048 		JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936543:7,887,511...7,900,174
Ensembl chrNW_004936543:7,887,414...7,900,200 		JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936491:17,017,687...17,033,526
Ensembl chrNW_004936491:17,017,687...17,033,855 		JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936500:12,949,563...12,962,699
Ensembl chrNW_004936500:12,949,563...12,965,064 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G LOC120886263 H/ACA ribonucleoprotein complex subunit 3-like involved_in IEA TreeGrafter GO_REF:0000118
G Nop10 NOP10 ribonucleoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936673:2,829,599...2,830,407 JBrowse link
G Tcp1 t-complex 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936489:11,273,335...11,282,811 JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpo5 exportin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,434,629...16,481,044
Ensembl chrNW_004936476:16,434,638...16,481,044 		JBrowse link
regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chrNW_004936647:478,445...520,361
Ensembl chrNW_004936647:478,443...484,570 		JBrowse link
G LOC101966195 huntingtin ISO RGD PMID:20185826 RGD:10403027 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071 		JBrowse link
G Pum2 pumilio RNA binding family member 2 ISO RGD PMID:31606248 RGD:242905203 NCBI chrNW_004936493:11,067,318...11,154,133
Ensembl chrNW_004936493:11,067,202...11,155,377 		JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:5,088,260...5,123,735
Ensembl chrNW_004936596:5,088,361...5,123,649 		JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23177736) UniProt
Ensembl		 PMID:23177736 GO_REF:0000107 NCBI chrNW_004936741:1,729,707...1,756,108
Ensembl chrNW_004936741:1,729,679...1,757,419 		JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:43,766,699...43,805,919
Ensembl chrNW_004936469:43,766,663...43,808,333 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936634:798,894...825,413
Ensembl chrNW_004936634:799,176...826,852 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597 		JBrowse link
G Thoc2 THO complex 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24315442) Ensembl
MGI		 PMID:24315442 GO_REF:0000107 NCBI chrNW_004936479:6,855,405...6,972,256
Ensembl chrNW_004936479:6,855,411...6,972,256 		JBrowse link
G Thoc5 THO complex subunit 5 acts_upstream_of_or_within ISO (PMID:24315442) MGI PMID:24315442 NCBI chrNW_004936657:3,465,707...3,503,966
Ensembl chrNW_004936657:3,461,789...3,503,976 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:933,637...1,069,885
Ensembl chrNW_004936606:934,337...1,067,275 		JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12496368) Ensembl
MGI		 PMID:12496368 GO_REF:0000107 NCBI chrNW_004936474:15,088,815...15,131,048
Ensembl chrNW_004936474:15,088,816...15,118,310 		JBrowse link
regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:4,884,458...4,918,041
Ensembl chrNW_004936597:4,884,421...4,922,119 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G Exosc10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:130,735...153,608
Ensembl chrNW_004936474:130,329...153,962 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:2,666,908...2,810,159
Ensembl chrNW_004936501:2,666,874...2,810,488 		JBrowse link
RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor involved_in ISO (PMID:28418038) UniProt PMID:28418038 NCBI chrNW_004936594:5,398,973...5,402,846 JBrowse link
G Nup153 nucleoporin 153 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936552:3,529,506...3,588,830
Ensembl chrNW_004936552:3,530,559...3,577,177 		JBrowse link
G Nup155 nucleoporin 155 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936518:4,635,970...4,688,669
Ensembl chrNW_004936518:4,635,869...4,690,943 		JBrowse link
G Nup188 nucleoporin 188 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:16,408,523...16,462,916
Ensembl chrNW_004936487:16,408,518...16,462,923 		JBrowse link
G Nup214 nucleoporin 214 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:17,981,402...18,067,828
Ensembl chrNW_004936487:17,981,304...18,067,854 		JBrowse link
G Nup62 nucleoporin 62 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936664:3,690,728...3,713,819
Ensembl chrNW_004936664:3,690,567...3,713,719 		JBrowse link
G Nup62cl nucleoporin 62 C-terminal like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:7,503,475...7,579,453 JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936498:1,112,724...1,219,790
Ensembl chrNW_004936498:1,112,663...1,220,634 		JBrowse link
G Nxf1 nuclear RNA export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11579093) Ensembl
MGI		 PMID:11579093 GO_REF:0000107 NCBI chrNW_004936581:488,691...501,323
Ensembl chrNW_004936581:488,718...504,853 		JBrowse link
G Nxf5 nuclear RNA export factor 5 acts_upstream_of_or_within ISO (PMID:16027110) MGI PMID:16027110 NCBI chrNW_004936813:733,393...874,254 JBrowse link
G Nxt1 nuclear transport factor 2 like export factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11579093) Ensembl
MGI		 PMID:11579093 GO_REF:0000107 NCBI chrNW_004936620:2,243,181...2,246,244
Ensembl chrNW_004936620:2,243,210...2,246,119 		JBrowse link
G Pom121c POM121 transmembrane nucleoporin C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:2,593,928...2,618,244 JBrowse link
G Rae1 ribonucleic acid export 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:200,369...219,807
Ensembl chrNW_004936530:200,584...220,520 		JBrowse link
G Rbm33 RNA binding motif protein 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,936,094...10,017,054
Ensembl chrNW_004936527:9,936,317...10,011,104 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
G Xpo5 exportin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:16,434,629...16,481,044
Ensembl chrNW_004936476:16,434,638...16,481,044 		JBrowse link
RNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:1,989,429...2,032,430
Ensembl chrNW_004936491:1,987,097...2,032,430 		JBrowse link
RNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpnb1 karyopherin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,603,520...13,635,567
Ensembl chrNW_004936490:13,603,498...13,635,682 		JBrowse link
G Snupn snurportin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,373,492...34,393,666
Ensembl chrNW_004936471:34,373,468...34,393,692 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
RNA localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
RNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:17004321) RGD
HGNC-UCL		 PMID:14523087 PMID:17004321 RGD:9685480 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381 		JBrowse link
G Nxf5 nuclear RNA export factor 5 involved_in ISO (PMID:11566096) UniProt PMID:11566096 NCBI chrNW_004936813:733,393...874,254 JBrowse link
G Sidt1 SID1 transmembrane family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936536:1,074,987...1,156,318
Ensembl chrNW_004936536:1,075,251...1,156,312 		JBrowse link
G Sidt2 SID1 transmembrane family member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:2,426,937...2,443,721
Ensembl chrNW_004936542:2,426,937...2,443,721 		JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chrNW_004936474:24,026,459...24,047,724
Ensembl chrNW_004936474:24,026,377...24,047,724 		JBrowse link
rRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrpl18 mitochondrial ribosomal protein L18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:11,283,601...11,289,125
Ensembl chrNW_004936489:11,283,309...11,289,200 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:1,989,429...2,032,430
Ensembl chrNW_004936491:1,987,097...2,032,430 		JBrowse link
G Tst thiosulfate sulfurtransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,880,545...3,886,881
Ensembl chrNW_004936492:3,880,500...3,886,950 		JBrowse link
rRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tst thiosulfate sulfurtransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,880,545...3,886,881
Ensembl chrNW_004936492:3,880,500...3,886,950 		JBrowse link
scaRNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cct2 chaperonin containing TCP1 subunit 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chrNW_004936545:7,416,257...7,436,024
Ensembl chrNW_004936545:7,415,753...7,439,800 		JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:25467444) Ensembl
BHF-UCL		 PMID:25467444 GO_REF:0000107 NCBI chrNW_004936491:7,224,989...7,241,348
Ensembl chrNW_004936491:7,224,692...7,241,358 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G Tcp1 t-complex 1 acts_upstream_of_positive_effect ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936489:11,273,335...11,282,811 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:936,184...952,784
Ensembl chrNW_004936595:936,487...952,791 		JBrowse link
snoRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbl fibrillarin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,444,985...2,455,423
Ensembl chrNW_004936661:2,444,866...2,455,528 		JBrowse link
G Nop58 NOP58 ribonucleoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,457,038...1,487,374
Ensembl chrNW_004936726:1,457,002...1,486,530 		JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,321,278...3,326,720
Ensembl chrNW_004936664:3,321,136...3,326,093 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 NOT|involved_in ISO (PMID:17636026) UniProt PMID:17636026 NCBI chrNW_004936994:239,688...252,269
Ensembl chrNW_004936994:239,682...252,317 		JBrowse link
G Znhit3 zinc finger HIT-type containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:1,707,309...1,716,315
Ensembl chrNW_004936490:1,707,660...1,716,361 		JBrowse link
G Znhit6 zinc finger HIT-type containing 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936608:33,425...94,291
Ensembl chrNW_004936608:33,384...93,335 		JBrowse link
snRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:6,429,735...6,465,035
Ensembl chrNW_004936524:6,429,185...6,465,035 		JBrowse link
G Ncbp3 nuclear cap binding subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:460,237...493,634
Ensembl chrNW_004936677:462,868...488,212 		JBrowse link
G Phax phosphorylated adaptor for RNA export involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10786834) InterPro
TreeGrafter
MGI
Ensembl		 PMID:10786834 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936504:1,585...14,592
Ensembl chrNW_004936504:1,639...14,031 		JBrowse link
snRNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ran RAN, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936660:1,669,352...1,673,972
Ensembl chrNW_004936660:1,668,956...1,672,067 		JBrowse link
G Snupn snurportin 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936471:34,373,492...34,393,666
Ensembl chrNW_004936471:34,373,468...34,393,692 		JBrowse link
telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936555:2,392,202...2,428,857
Ensembl chrNW_004936555:2,392,721...2,426,759 		JBrowse link
G Nhp2 NHP2 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936647:520,542...525,226
Ensembl chrNW_004936647:520,494...525,226 		JBrowse link
G Nop10 NOP10 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936673:2,829,599...2,830,407 JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936798:559,706...572,710
Ensembl chrNW_004936798:559,778...572,506 		JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853 		JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936603:3,831,838...3,900,429
Ensembl chrNW_004936603:3,831,018...3,900,971 		JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:936,184...952,784
Ensembl chrNW_004936595:936,487...952,791 		JBrowse link
tRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nol6 nucleolar protein 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:1,981,832...1,997,153
Ensembl chrNW_004936524:1,982,898...1,997,054 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:286,397...295,779
Ensembl chrNW_004936509:286,398...298,147 		JBrowse link
G Xpot exportin for tRNA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:2,721,437...2,762,785
Ensembl chrNW_004936545:2,721,379...2,762,793 		JBrowse link
tRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101963137 mitochondrial import receptor subunit TOM20 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:9,706,360...9,707,307 JBrowse link
G Tomm20 translocase of outer mitochondrial membrane 20 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:17,283,527...17,295,157
Ensembl chrNW_004936484:17,283,548...17,295,157 		JBrowse link
tRNA re-export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpot exportin for tRNA involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936545:2,721,437...2,762,785
Ensembl chrNW_004936545:2,721,379...2,762,793 		JBrowse link
tRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chrNW_004936474:24,026,459...24,047,724
Ensembl chrNW_004936474:24,026,377...24,047,724 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16121
    localization 5229
      macromolecule localization 2928
        RNA localization 155
          RNA localization to chromatin 1
          RNA localization to nucleus + 20
          establishment of RNA localization + 116
          intracellular mRNA localization + 16
          maintenance of RNA location + 0
          mitochondrial RNA localization + 0
          pole plasm RNA localization + 0
          snoRNA localization 6
          telomerase RNA localization + 20
paths to the root