ONTOLOGY REPORT - ANNOTATIONS |
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Term: | RNA localization |
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Accession: | GO:0006403
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browse the term
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Definition: | A process in which RNA is transported to, or maintained in, a specific location. |
Synonyms: | exact_synonym: | RNA localisation; establishment and maintenance of RNA localization |
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Igf2bp1 |
insulin-like growth factor 2 mRNA binding protein 1 |
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IMP |
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RGD |
PMID:14614102 |
RGD:1299544 |
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
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Linc00176 |
long intergenic non-protein coding RNA 176 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991
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Prpf6 |
pre-mRNA processing factor 6 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:20797886) GO_REF:0000107 |
RGD Ensembl |
PMID:20797886 |
GO_REF:0000107 |
NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
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Yy1 |
YY1 transcription factor |
acts_upstream_of_or_within |
ISO |
(PMID:21729784) |
RGD |
PMID:21729784 |
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NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
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Flot1 |
flotillin 1 |
involved_in |
ISO |
(PMID:25204797) |
RGD |
PMID:25204797 |
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NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
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Rftn1 |
raftlin lipid raft linker 1 |
acts_upstream_of_or_within |
ISO |
(PMID:21266579) |
RGD |
PMID:21266579 |
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NCBI chr 9:10,804,611...11,002,084
Ensembl chr 9:10,804,611...11,002,084
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Rftn2 |
raftlin family member 2 |
acts_upstream_of_or_within |
ISO |
(PMID:21266579) |
RGD |
PMID:21266579 |
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NCBI chr 9:56,651,617...56,707,830
Ensembl chr 9:56,630,460...56,707,810
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Atm |
ATM serine/threonine kinase |
involved_in |
ISO |
(PMID:26586433) |
RGD |
PMID:26586433 |
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NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Atr |
ATR serine/threonine kinase |
involved_in |
ISO |
(PMID:26586433) |
RGD |
PMID:26586433 |
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NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
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AABR07046707.1 |
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involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
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Caprin1 |
cell cycle associated protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:4838547 (PMID:20861386) |
Ensembl RGD |
PMID:20861386 |
GO_REF:0000107 |
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
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Casc3 |
CASC3 exon junction complex subunit |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:12843282) |
Ensembl RGD |
PMID:12843282 |
GO_REF:0000107 |
NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966
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Fubp3 |
far upstream element binding protein 3 |
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IMP |
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RGD |
PMID:23121659 |
RGD:12792285 |
NCBI chr 3:14,855,527...14,904,540
Ensembl chr 3:14,855,557...14,904,540
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Kif5c |
kinesin family member 5C |
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IMP |
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RGD |
PMID:23121659 |
RGD:12792285 |
NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
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Qki |
QKI, KH domain containing RNA binding |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:37379838) |
Ensembl RGD |
PMID:37379838 |
GO_REF:0000107 |
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Stau1 |
staufen double-stranded RNA binding protein 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:12843282) |
GO_Central RGD |
PMID:12843282 |
GO_REF:0000033 |
NCBI chr 3:155,680,000...155,725,969
Ensembl chr 3:155,680,000...155,725,909
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Stau2 |
staufen double-stranded RNA binding protein 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
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Zfp385a |
zinc finger protein 385A |
acts_upstream_of_or_within |
ISO |
MGI:3510440 (PMID:16286649) |
RGD |
PMID:16286649 |
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NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548
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Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:24356509) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:24356509 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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Tgfbr2 |
transforming growth factor, beta receptor 2 |
involved_in |
ISO IEA |
(MGI:6099018|PMID:25801897) GO_REF:0000107 |
RGD Ensembl |
PMID:25801897 |
GO_REF:0000107 MGI:6099018 |
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
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Ybx1 |
Y box binding protein 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:27559612) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:27559612 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
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Alkbh5 |
alkB homolog 5, RNA demethylase |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331
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Alyref |
Aly/REF export factor |
involved_in |
ISO IBA |
(PMID:17190602), (PMID:25662211) GO_REF:0000033 |
RGD GO_Central |
PMID:17190602 PMID:25662211 |
GO_REF:0000033 |
NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069
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Chtop |
chromatin target of PRMT1 |
involved_in |
ISO IBA |
(PMID:23299939) GO_REF:0000033 |
RGD GO_Central |
PMID:23299939 |
GO_REF:0000033 |
NCBI chr 2:175,981,266...175,992,820
Ensembl chr 2:175,981,271...175,992,748
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Chtopl1 |
chromatin target of PRMT1-like 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 4:162,804,334...162,805,461
Ensembl chr 4:162,804,336...162,805,581
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Da2-19 |
uncharacterized LOC302729 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr X:44,820,693...44,837,935
Ensembl chr X:44,820,820...44,837,934
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Ddx25 |
DEAD-box helicase 25 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3696333|PMID:16968703) |
UniProt RGD |
PMID:16968703 |
GO_REF:0000024 MGI:3696333 |
NCBI chr 8:33,894,224...33,910,377
Ensembl chr 8:33,894,232...33,921,764
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Ddx39a |
DExD-box helicase 39A |
involved_in |
ISO IBA IEA |
UniProtKB:Q07478 (PMID:15047853) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:15047853 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr19:24,418,743...24,427,422
Ensembl chr19:24,418,114...24,426,954
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Ddx39b |
DExD-box helicase 39B |
involved_in |
ISO IBA IEA |
UniProtKB:Q07478 (PMID:15047853), (PMID:17190602) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:15047853 PMID:17190602 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Eif4e |
eukaryotic translation initiation factor 4E |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3700413|PMID:11500381), (MGI:7484269|PMID:8577715) |
UniProt RGD |
PMID:8577715 PMID:11500381 |
GO_REF:0000024 MGI:3700413 MGI:7484269 |
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
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Fmr1 |
fragile X messenger ribonucleoprotein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:31340148) (PMID:31753916) |
UniProt RGD |
PMID:31340148 PMID:31753916 |
GO_REF:0000024 |
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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Fyttd1 |
forty-two-three domain containing 1 |
involved_in |
ISO IBA IEA ISS |
(PMID:19836239) GO_REF:0000033 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 |
RGD GO_Central InterPro UniProt Ensembl |
PMID:19836239 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:67,877,967...67,907,500
Ensembl chr11:67,877,967...67,907,511
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Hhex |
hematopoietically expressed homeobox |
involved_in |
ISO |
(PMID:12554669) |
RGD |
PMID:12554669 |
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NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
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Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
involved_in |
IDA IEA ISO |
PMID:9578590 GO_REF:0000107 (PMID:10567417) |
Ensembl RGD |
PMID:10567417 PMID:9578590 PMID:10567417 |
GO_REF:0000107, RGD:9685477, RGD:9685424 |
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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Mcm3ap |
minichromosome maintenance complex component 3 associated protein |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165
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Ncbp1 |
nuclear cap binding protein subunit 1 |
involved_in |
ISS IBA IEA ISO |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000002 (PMID:17190602), (PMID:21326824), (PMID:26382858) |
UniProt GO_Central InterPro RGD |
PMID:17190602 PMID:21326824 PMID:26382858 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 |
NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
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Ncbp2 |
nuclear cap binding protein subunit 2 |
involved_in |
ISO IEA |
(PMID:21326824) GO_REF:0000107 |
RGD Ensembl |
PMID:21326824 |
GO_REF:0000107 |
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
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Ncbp3 |
nuclear cap binding subunit 3 |
involved_in |
ISO |
(PMID:26382858) |
RGD |
PMID:26382858 |
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NCBI chr10:57,665,716...57,695,432
Ensembl chr10:57,665,716...57,695,432
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Nup107 |
nucleoporin 107 |
involved_in |
ISO IBA IEA ISS |
(PMID:11684705) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:11684705 PMID:11684705 |
GO_REF:0000033 GO_REF:0000107, RGD:8553287 |
NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370
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Nup133 |
nucleoporin 133 |
involved_in |
ISO |
(PMID:11684705) |
RGD |
PMID:11684705 |
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NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239
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Nup155 |
nucleoporin 155 |
acts_upstream_of_or_within |
ISO |
MGI:3840086 (PMID:19070573) |
RGD |
PMID:19070573 |
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NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
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Nup160 |
nucleoporin 160 |
involved_in |
ISO |
(PMID:11684705) (MGI:3690169|PMID:11684705) |
RGD |
PMID:11684705 |
MGI:3690169 |
NCBI chr 3:76,665,786...76,729,296
Ensembl chr 3:76,665,786...76,724,565
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Nup214 |
nucleoporin 214 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:10557333) MGI:2441651 (PMID:8896451) |
RGD |
PMID:8896451 PMID:10557333 |
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NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568
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Nup85 |
nucleoporin 85 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043
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Nup88 |
nucleoporin 88 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257
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Nxf1 |
nuclear RNA export factor 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000002 (PMID:19165146), (PMID:25628361), (PMID:28984244) |
UniProt InterPro RGD |
PMID:19165146 PMID:25628361 PMID:28984244 |
GO_REF:0000002 GO_REF:0000024 |
NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636
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Nxf3 |
nuclear RNA export factor 3 |
involved_in |
ISO |
(PMID:11545741) |
RGD |
PMID:11545741 |
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NCBI chr X:99,025,901...99,050,409
Ensembl chr X:99,025,901...99,039,261
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Nxf7 |
nuclear RNA export factor 7 |
involved_in |
ISO |
(PMID:11566096) |
RGD |
PMID:11566096 |
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NCBI chr X:98,535,374...98,552,562
Ensembl chr X:98,535,375...98,552,526
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Nxt1 |
nuclear transport factor 2-like export factor 1 |
involved_in |
ISO |
(PMID:25628361) |
RGD |
PMID:25628361 |
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NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907
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Rbm15b |
RNA binding motif protein 15B |
involved_in |
ISO |
(MGI:6158828|PMID:19586903) |
RGD |
PMID:19586903 |
MGI:6158828 |
NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696
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Sarnp |
SAP domain containing ribonucleoprotein |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:20844015) |
UniProt Ensembl RGD |
PMID:20844015 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:1,251,096...1,305,335
Ensembl chr 7:1,251,098...1,305,332
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Sem1 |
SEM1 26S proteasome subunit |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
NCBI chr 4:34,671,848...34,692,005
Ensembl chr 4:34,671,848...34,692,005
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Srsf3 |
serine and arginine rich splicing factor 3 |
involved_in |
ISO |
(PMID:28984244) |
RGD |
PMID:28984244 |
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NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078
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Thoc1 |
THO complex subunit 1 |
involved_in |
ISO |
(PMID:22144908) |
RGD |
PMID:22144908 |
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NCBI chr18:983,824...1,019,123
Ensembl chr18:983,824...1,019,114
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Thoc2 |
THO complex subunit 2 |
involved_in |
ISO IBA |
(PMID:17190602) GO_REF:0000033 |
RGD GO_Central |
PMID:17190602 |
GO_REF:0000033 |
NCBI chr X:120,634,966...120,749,569
Ensembl chr X:120,634,968...120,749,513
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Thoc2l |
THO complex subunit 2-like |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr14:5,197,093...5,234,960
Ensembl chr14:5,197,003...5,235,453
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Thoc3 |
THO complex subunit 3 |
involved_in |
ISO IBA |
(PMID:17190602) GO_REF:0000033 |
RGD GO_Central |
PMID:17190602 |
GO_REF:0000033 |
NCBI chr17:10,143,184...10,152,375
Ensembl chr17:10,143,139...10,152,370
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Thoc5 |
THO complex subunit 5 |
involved_in |
IEA IBA ISO ISS |
GO_REF:0000107 GO_REF:0000033 (PMID:17190602), (PMID:22144908) GO_REF:0000024 |
Ensembl GO_Central RGD UniProt |
PMID:17190602 PMID:22144908 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
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Thoc6 |
THO complex subunit 6 |
involved_in |
ISO IBA |
(PMID:17190602) GO_REF:0000033 |
RGD GO_Central |
PMID:17190602 |
GO_REF:0000033 |
NCBI chr10:12,700,051...12,705,411
Ensembl chr10:12,700,051...12,706,925
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Thoc7 |
THO complex subunit 7 |
involved_in |
ISO IBA |
(PMID:17190602) GO_REF:0000033 |
RGD GO_Central |
PMID:17190602 |
GO_REF:0000033 |
NCBI chr15:11,262,362...11,277,200
Ensembl chr15:11,262,613...11,277,193
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Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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Xpo1 |
exportin 1 |
involved_in |
ISO IEA |
(MGI:6390707|PMID:31340148), (PMID:31340148) GO_REF:0000107 |
RGD Ensembl |
PMID:31340148 |
GO_REF:0000107 MGI:6390707 |
NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498
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Ythdc1 |
YTH N6-methyladenosine RNA binding protein C1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:28984244) |
UniProt RGD |
PMID:28984244 |
GO_REF:0000024 |
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
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Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
ISO IEA ISS |
(PMID:17897941) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:17897941 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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A1cf |
APOBEC1 complementation factor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:104663 (PMID:20541607) |
Ensembl RGD |
PMID:20541607 |
GO_REF:0000107 |
NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354
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Ckap5 |
cytoskeleton associated protein 5 |
acts_upstream_of_or_within |
ISO |
MGI:3051635|MGI:5570192 (PMID:28063167) |
RGD |
PMID:28063167 |
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NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
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Zfp385a |
zinc finger protein 385A |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:3510440 (PMID:16286649) |
GO_Central RGD |
PMID:16286649 |
GO_REF:0000033 |
NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548
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AABR07006740.1 |
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involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
Ensembl chr 1:230,295,276...230,295,656
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G |
AABR07018058.1 |
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involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
Ensembl chr15:31,592,001...31,592,384
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Arc |
activity-regulated cytoskeleton-associated protein |
involved_in |
IDA |
PMID:29328916 |
UniProt |
PMID:29328916 |
RGD:13514080 |
NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
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Casc3 |
CASC3 exon junction complex subunit |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966
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Cpeb1 |
cytoplasmic polyadenylation element binding protein 1 |
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IMP |
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RGD |
PMID:12629046 |
RGD:9685156 |
NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
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Eif4a3 |
eukaryotic translation initiation factor 4A3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
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Eif4e |
eukaryotic translation initiation factor 4E |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
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ENSRNOG00000068600 |
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involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
Ensembl chr 2:136,282,917...136,284,328
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Fmr1 |
fragile X messenger ribonucleoprotein 1 |
involved_in |
ISS ISO IEA IBA |
GO_REF:0000024 (MGI:3798322|PMID:18539120) GO_REF:0000043 GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:18539120 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 MGI:3798322 |
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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Fxr1 |
FMR1 autosomal homolog 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
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Fxr1-ps1 |
FMR1 autosomal homolog 1, pseudogene 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
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Fxr2 |
FMR1 autosomal homolog 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
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Hnrnpa1 |
heterogeneous nuclear ribonucleoprotein A1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
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Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
involved_in |
IEA IBA |
GO_REF:0000043 GO_REF:0000033 |
UniProt GO_Central |
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GO_REF:0000033 GO_REF:0000043 |
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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Hnrnpa3 |
heterogeneous nuclear ribonucleoprotein A3 |
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IMP |
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RGD |
PMID:11886857 |
RGD:625404 |
NCBI chr 3:60,578,574...60,588,755
Ensembl chr 3:60,578,673...60,588,306
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Htt |
huntingtin |
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IMP |
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RGD |
PMID:22355657 |
RGD:6902916 |
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
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Igf2bp1 |
insulin-like growth factor 2 mRNA binding protein 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
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Igf2bp2 |
insulin-like growth factor 2 mRNA binding protein 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
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Igf2bp3 |
insulin-like growth factor 2 mRNA binding protein 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
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Khsrp |
KH-type splicing regulatory protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 9:1,862,555...1,872,403
Ensembl chr 9:1,862,899...1,872,451
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Kif5c |
kinesin family member 5C |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4413400|PMID:19608740) |
UniProt RGD |
PMID:19608740 |
GO_REF:0000024 MGI:4413400 |
NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
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G |
Lrpprc |
leucine-rich pentatricopeptide repeat containing |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 6:9,859,816...9,942,294
Ensembl chr 6:9,859,867...9,942,293
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Magoh |
mago homolog, exon junction complex subunit |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617
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Mapt |
microtubule-associated protein tau |
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IMP |
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RGD |
PMID:25847153 |
RGD:11061097 |
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
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Ndc1 |
NDC1 transmembrane nucleoporin |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
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G |
Nup107 |
nucleoporin 107 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370
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G |
Nup153 |
nucleoporin 153 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
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G |
Nup188 |
nucleoporin 188 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 3:13,559,917...13,616,313
Ensembl chr 3:13,559,990...13,616,307
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G |
Nup210 |
nucleoporin 210 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 4:123,511,558...123,609,874
Ensembl chr 4:123,511,559...123,609,874
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G |
Nup35 |
nucleoporin 35 |
involved_in |
IEA |
GO_REF:0000043 GO_REF:0000104 |
UniProt |
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GO_REF:0000043 GO_REF:0000104 |
NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130
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G |
Nup50 |
nucleoporin 50 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 7:116,047,960...116,065,231
Ensembl chr 7:116,048,021...116,066,905
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G |
Nup50-ps1 |
nucleoporin 50, pseudogene 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 4:128,787,567...128,789,296
Ensembl chr 4:128,787,100...128,789,312
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G |
Nup54 |
nucleoporin 54 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028
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G |
Nup58 |
nucleoporin 58 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060
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G |
Nup62 |
nucleoporin 62 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174
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G |
Nup85 |
nucleoporin 85 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043
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G |
Nup88 |
nucleoporin 88 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257
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G |
Nup93 |
nucleoporin 93 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
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Nup98 |
nucleoporin 98 and 96 precursor |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
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G |
Nutf2 |
nuclear transport factor 2 |
involved_in |
IEA |
GO_REF:0000043 GO_REF:0000104 |
UniProt |
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GO_REF:0000043 GO_REF:0000104 |
NCBI chr19:33,752,319...33,773,595
Ensembl chr19:33,752,291...33,773,591
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G |
Nutf2l1 |
nuclear transport factor 2 like 1 |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
NCBI chr 7:11,960,791...11,962,329
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Peg10 |
paternally expressed 10 |
involved_in |
ISO |
(MGI:6828898|PMID:34413232) |
RGD |
PMID:34413232 |
MGI:6828898 |
NCBI chr 4:32,842,441...32,855,639
Ensembl chr 4:32,848,493...32,852,621
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Pom121 |
POM121 transmembrane nucleoporin |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294
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G |
Qki |
QKI, KH domain containing RNA binding |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:37379838) |
Ensembl RGD |
PMID:37379838 |
GO_REF:0000107 |
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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G |
Rbm8a |
RNA binding motif protein 8A |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959
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Sec13 |
SEC13 homolog, nuclear pore and COPII coat complex component |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173
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G |
Sec13-ps2 |
SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr18:967,396...968,674
Ensembl chr18:967,394...968,680 Ensembl chr18:967,394...968,680
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G |
Senp2 |
SUMO specific peptidase 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
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G |
Slbp |
stem-loop histone mRNA binding protein |
involved_in |
ISO IBA |
(PMID:19155325) GO_REF:0000033 |
RGD GO_Central |
PMID:19155325 |
GO_REF:0000033 |
NCBI chr14:77,071,441...77,081,911
Ensembl chr14:77,071,632...77,081,906
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G |
Slbpl |
stem-loop binding protein like |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr18:26,356,478...26,363,577
Ensembl chr18:26,356,474...26,363,577
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G |
Thrap3 |
thyroid hormone receptor associated protein 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
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G |
Zfp36 |
zinc finger protein 36 |
involved_in |
ISO ISS |
(PMID:17369404) GO_REF:0000024 |
RGD UniProt |
PMID:17369404 |
GO_REF:0000024 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in |
ISO ISS |
(PMID:17369404) GO_REF:0000024 |
RGD UniProt |
PMID:17369404 |
GO_REF:0000024 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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G |
Terf1 |
telomeric repeat binding factor 1 |
involved_in |
ISO |
(PMID:26586433) |
RGD |
PMID:26586433 |
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NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
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G |
Nup153 |
nucleoporin 153 |
involved_in |
ISO IEA ISS |
(PMID:22253824) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:22253824 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
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Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
ISO IEA ISS |
(PMID:21613532), (PMID:22253824) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:21613532 PMID:22253824 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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C7h12orf50 |
similar to human chromosome 12 open reading frame 50 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 7:35,406,147...35,443,324
Ensembl chr 7:35,411,555...35,443,320
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G |
Ddx19a |
DEAD-box helicase 19A |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr19:38,942,497...38,962,853
Ensembl chr19:38,942,496...38,962,854
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G |
Ddx19b |
DEAD-box helicase 19B |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259
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G |
Ddx25 |
DEAD-box helicase 25 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 8:33,894,224...33,910,377
Ensembl chr 8:33,894,232...33,921,764
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Eny2 |
ENY2, transcription and export complex 2 subunit |
involved_in |
ISO IBA |
(PMID:23591820) GO_REF:0000033 |
RGD GO_Central |
PMID:23591820 |
GO_REF:0000033 |
NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897
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Gle1 |
GLE1 RNA export mediator |
involved_in |
IEA IBA |
GO_REF:0000002 GO_REF:0000033 |
InterPro GO_Central |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 3:13,209,312...13,237,018
Ensembl chr 3:13,209,322...13,237,379
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G |
Gle1-ps1 |
GLE1 RNA export mediator, pseudogene 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 6:107,124,892...107,127,024
Ensembl chr 6:107,124,892...107,127,024 Ensembl chr 6:107,124,892...107,127,024
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G |
Gle1l1 |
GLE1 RNA export mediator like 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 6:107,202,205...107,204,543
Ensembl chr 6:107,202,400...107,204,535
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G |
Hhex |
hematopoietically expressed homeobox |
involved_in |
ISO |
(PMID:12554669) |
RGD |
PMID:12554669 |
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NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
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G |
Iws1 |
interacts with SUPT6H, CTD assembly factor 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr18:23,695,496...23,737,363
Ensembl chr18:23,695,425...23,736,172
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G |
Mcm3ap |
minichromosome maintenance complex component 3 associated protein |
involved_in |
ISO |
(PMID:23591820) |
RGD |
PMID:23591820 |
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NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165
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G |
Nup133 |
nucleoporin 133 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239
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G |
Nup93 |
nucleoporin 93 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
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G |
Nxf1 |
nuclear RNA export factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 PR:Q9QZV9|UniProtKB:Q6P250 (PMID:15820316) GO_REF:0000033 |
Ensembl RGD GO_Central |
PMID:15820316 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636
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G |
Nxf2 |
nuclear RNA export factor 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:98,135,953...98,157,117
Ensembl chr X:98,135,950...98,157,089
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G |
Nxf3 |
nuclear RNA export factor 3 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 UniProtKB:Q77YF8 (PMID:15820316) |
GO_Central RGD |
PMID:15820316 |
GO_REF:0000033 |
NCBI chr X:99,025,901...99,050,409
Ensembl chr X:99,025,901...99,039,261
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G |
Nxf5 |
nuclear RNA export factor 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:98,676,259...98,698,739
Ensembl chr X:98,689,466...98,695,167
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G |
Nxf7 |
nuclear RNA export factor 7 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 PR:Q9QZV9|UniProtKB:Q6P250 (PMID:15820316) |
GO_Central RGD |
PMID:15820316 |
GO_REF:0000033 |
NCBI chr X:98,535,374...98,552,562
Ensembl chr X:98,535,375...98,552,526
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G |
Nxt1 |
nuclear transport factor 2-like export factor 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907
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G |
Nxt2 |
nuclear transport factor 2-like export factor 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:105,855,616...105,862,902
Ensembl chr X:105,855,608...105,862,899
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G |
Pabpn1 |
poly(A) binding protein, nuclear 1 |
involved_in |
ISO |
(PMID:19364924) |
RGD |
PMID:19364924 |
|
NCBI chr15:28,368,100...28,372,712
Ensembl chr15:28,368,100...28,372,703
|
|
G |
Pcid2 |
PCI domain containing 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
|
|
G |
Poldip3 |
DNA polymerase delta interacting protein 3 |
involved_in |
ISO IBA |
(PMID:22928037) GO_REF:0000033 (MGI:5520029|PMID:22928037) |
RGD GO_Central |
PMID:22928037 |
GO_REF:0000033 MGI:5520029 |
NCBI chr 7:114,274,845...114,303,278
Ensembl chr 7:114,275,085...114,303,271
|
|
G |
Sarnp |
SAP domain containing ribonucleoprotein |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:1,251,096...1,305,335
Ensembl chr 7:1,251,098...1,305,332
|
|
G |
Thoc2 |
THO complex subunit 2 |
involved_in |
ISO |
(PMID:22928037) |
RGD |
PMID:22928037 |
|
NCBI chr X:120,634,966...120,749,569
Ensembl chr X:120,634,968...120,749,513
|
|
G |
Zc3h11a |
zinc finger CCCH-type containing 11A |
involved_in |
ISO |
(PMID:22928037) |
RGD |
PMID:22928037 |
|
NCBI chr13:45,073,422...45,113,901
Ensembl chr13:45,071,718...45,114,009
|
|
|
G |
Dhx36 |
DEAH-box helicase 36 |
involved_in |
IMP |
PMID:23651854 |
UniProt |
PMID:23651854 |
RGD:13792545 |
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
|
|
G |
Zfp36 |
zinc finger protein 36 |
involved_in |
ISO ISS |
(PMID:17369404) GO_REF:0000024 |
RGD UniProt |
PMID:17369404 |
GO_REF:0000024 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
|
|
G |
Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in |
ISO ISS |
(PMID:17369404) GO_REF:0000024 |
RGD UniProt |
PMID:17369404 |
GO_REF:0000024 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
|
|
|
G |
Cpsf6 |
cleavage and polyadenylation specific factor 6 |
involved_in |
ISO |
(PMID:19864460) |
RGD |
PMID:19864460 |
|
NCBI chr 7:52,956,589...53,001,783
Ensembl chr 7:52,956,589...52,988,122
|
|
G |
Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:11402034) |
RGD |
PMID:11402034 |
|
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
|
|
G |
Khdrbs1 |
KH RNA binding domain containing, signal transduction associated 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21613532) |
UniProt RGD |
PMID:21613532 |
GO_REF:0000024 |
NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
|
|
G |
Ncbp2 |
nuclear cap binding protein subunit 2 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
|
|
G |
Nrde2 |
NRDE-2, necessary for RNA interference, domain containing |
involved_in |
ISO |
(PMID:30842217) |
RGD |
PMID:30842217 |
|
NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915
|
|
|
G |
Cct2 |
chaperonin containing TCP1 subunit 2 |
involved_in |
ISO IEA |
(PMID:25467444) GO_REF:0000107 |
RGD Ensembl |
PMID:25467444 |
GO_REF:0000107 |
NCBI chr 7:52,692,725...52,705,478
Ensembl chr 7:52,692,725...52,706,944
|
|
G |
Cct3 |
chaperonin containing TCP1 subunit 3 |
involved_in |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
|
NCBI chr 2:173,765,701...173,790,353
Ensembl chr 2:173,765,698...173,790,757
|
|
G |
Cct4 |
chaperonin containing TCP1 subunit 4 |
involved_in |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
|
NCBI chr14:96,991,853...97,004,732
Ensembl chr14:96,991,859...97,005,267
|
|
G |
Cct5 |
chaperonin containing TCP1 subunit 5 |
involved_in |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
|
NCBI chr 2:82,591,750...82,602,903
Ensembl chr 2:82,590,630...82,602,930
|
|
G |
Cct6a |
chaperonin containing TCP1 subunit 6A |
involved_in |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
|
NCBI chr12:26,872,736...26,883,125
Ensembl chr12:26,872,574...26,883,337
|
|
G |
Cct7 |
chaperonin containing TCP1 subunit 7 |
involved_in |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
|
NCBI chr 4:117,989,232...118,006,478
Ensembl chr 4:117,989,232...118,006,580
|
|
G |
Cct8 |
chaperonin containing TCP1 subunit 8 |
involved_in |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
|
NCBI chr11:26,710,370...26,722,079
Ensembl chr11:26,710,370...26,722,079
|
|
G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
|
|
|
G |
Tcp1 |
t-complex 1 |
involved_in |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
|
NCBI chr 1:47,829,061...47,836,809
Ensembl chr 1:47,828,652...47,836,839
|
|
|
G |
Xpo5 |
exportin 5 |
involved_in |
ISO |
(PMID:14681208), (PMID:15613540) |
RGD |
PMID:14681208 PMID:15613540 |
|
NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171
|
|
|
G |
Hnrnpab |
heterogeneous nuclear ribonucleoprotein A/B |
|
IMP |
|
RGD |
PMID:21471000 |
RGD:9999187 |
NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
|
|
G |
Htt |
huntingtin |
|
IMP |
|
RGD |
PMID:20185826 |
RGD:10403027 |
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
|
|
G |
Pum2 |
pumilio RNA-binding family member 2 |
|
IMP |
|
RGD |
PMID:31606248 |
RGD:242905203 |
NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
|
|
|
G |
Akap8l |
A-kinase anchoring protein 8 like |
involved_in |
ISO |
(PMID:11402034) |
RGD |
PMID:11402034 |
|
NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
|
|
G |
Alkbh5 |
alkB homolog 5, RNA demethylase |
acts_upstream_of_or_within |
ISO ISS |
(PMID:23177736) GO_REF:0000024 |
RGD UniProt |
PMID:23177736 |
GO_REF:0000024 |
NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331
|
|
G |
Iws1 |
interacts with SUPT6H, CTD assembly factor 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:17234882) |
UniProt Ensembl RGD |
PMID:17234882 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr18:23,695,496...23,737,363
Ensembl chr18:23,695,425...23,736,172
|
|
G |
Nsun2 |
NOP2/Sun RNA methyltransferase 2 |
involved_in |
ISO |
(PMID:28418038) |
RGD |
PMID:28418038 |
|
NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
|
|
G |
Setd2 |
SET domain containing 2, histone lysine methyltransferase |
involved_in |
ISO |
(PMID:19141475) |
RGD |
PMID:19141475 |
|
NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489
|
|
G |
Supt6h |
SPT6 homolog, histone chaperone and transcription elongation factor |
involved_in |
ISO |
(MGI:5508611|PMID:17234882) |
RGD |
PMID:17234882 |
MGI:5508611 |
NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
|
|
G |
Thoc2 |
THO complex subunit 2 |
acts_upstream_of_or_within |
ISO |
(PMID:24315442) |
RGD |
PMID:24315442 |
|
NCBI chr X:120,634,966...120,749,569
Ensembl chr X:120,634,968...120,749,513
|
|
G |
Thoc5 |
THO complex subunit 5 |
acts_upstream_of_or_within |
ISO |
(PMID:24315442) |
RGD |
PMID:24315442 |
|
NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
|
|
G |
Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
ISO |
(PMID:22253824) |
RGD |
PMID:22253824 |
|
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
G |
Wnk1 |
WNK lysine deficient protein kinase 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:29196535) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:29196535 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905
|
|
|
G |
Khdrbs1 |
KH RNA binding domain containing, signal transduction associated 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:12496368) |
UniProt RGD |
PMID:12496368 |
GO_REF:0000024 |
NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
|
|
|
G |
Dcp2 |
decapping mRNA 2 |
involved_in |
ISO |
(PMID:26950371) |
RGD |
PMID:26950371 |
|
NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
|
|
G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
ISO |
(PMID:26950371) |
RGD |
PMID:26950371 |
|
|
|
G |
Exosc10 |
exosome component 10 |
involved_in |
ISO |
(PMID:26950371) |
RGD |
PMID:26950371 |
|
NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
|
|
G |
Parn |
poly(A)-specific ribonuclease |
involved_in |
ISO |
(PMID:26950371) |
RGD |
PMID:26950371 |
|
NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
|
|
|
G |
Alyref |
Aly/REF export factor |
involved_in |
ISO |
(PMID:28418038) |
RGD |
PMID:28418038 |
|
NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069
|
|
G |
Nup153 |
nucleoporin 153 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
|
|
G |
Nup155 |
nucleoporin 155 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
|
|
G |
Nup188 |
nucleoporin 188 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:13,559,917...13,616,313
Ensembl chr 3:13,559,990...13,616,307
|
|
G |
Nup62 |
nucleoporin 62 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174
|
|
G |
Nup62cl |
nucleoporin 62 C-terminal like |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:103,668,458...103,724,957
Ensembl chr X:103,668,455...103,724,081
|
|
G |
Nup98 |
nucleoporin 98 and 96 precursor |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
|
|
G |
Nxf1 |
nuclear RNA export factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11579093) |
RGD |
PMID:11579093 |
|
NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636
|
|
G |
Nxf7 |
nuclear RNA export factor 7 |
acts_upstream_of_or_within |
ISO |
(PMID:16027110) |
RGD |
PMID:16027110 |
|
NCBI chr X:98,535,374...98,552,562
Ensembl chr X:98,535,375...98,552,526
|
|
G |
Nxt1 |
nuclear transport factor 2-like export factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11579093) |
RGD |
PMID:11579093 |
|
NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907
|
|
G |
Pom121 |
POM121 transmembrane nucleoporin |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294
|
|
G |
Rae1 |
ribonucleic acid export 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:161,779,096...161,794,048
Ensembl chr 3:161,779,088...161,794,038
|
|
G |
Rbm33 |
RNA binding motif protein 33 |
involved_in |
ISO |
(PMID:35589130) |
RGD |
PMID:35589130 |
|
NCBI chr 4:6,980,807...7,088,334
Ensembl chr 4:6,983,970...7,089,918
|
|
G |
Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:11952838) |
UniProt RGD |
PMID:11952838 |
GO_REF:0000024 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
G |
Xpo5 |
exportin 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171
|
|
|
G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:20691904) |
RGD |
PMID:20691904 |
|
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
|
|
|
G |
Kpnb1 |
karyopherin subunit beta 1 |
involved_in |
ISO IEA |
(PMID:9670026) GO_REF:0000107 |
RGD Ensembl |
PMID:9670026 |
GO_REF:0000107 |
NCBI chr10:82,145,662...82,174,437
Ensembl chr10:82,145,420...82,174,605
|
|
G |
Snupn |
snurportin 1 |
involved_in |
ISO |
(PMID:9670026) |
RGD |
PMID:9670026 |
|
NCBI chr 8:57,347,412...57,388,345
Ensembl chr 8:57,348,130...57,380,912
|
|
G |
Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
ISO IEA ISS |
(PMID:9864356) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:9864356 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
|
G |
Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
ISO |
(MGI:4831049|PMID:20833368) |
RGD |
PMID:20833368 |
MGI:4831049 |
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
|
|
|
G |
Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
involved_in |
IMP ISO |
(PMID:17004321) |
RGD |
PMID:17004321 PMID:14523087 |
RGD:9685480 |
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
|
|
G |
Nxf7 |
nuclear RNA export factor 7 |
involved_in |
ISO |
(PMID:11566096) |
RGD |
PMID:11566096 |
|
NCBI chr X:98,535,374...98,552,562
Ensembl chr X:98,535,375...98,552,526
|
|
G |
Sidt1 |
SID1 transmembrane family, member 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr11:56,362,788...56,459,939
Ensembl chr11:56,363,512...56,459,050
|
|
G |
Sidt2 |
SID1 transmembrane family, member 2 |
involved_in |
ISO IBA IEA ISS |
(PMID:28277980) GO_REF:0000033 GO_REF:0000107 (MGI:5908512|PMID:27046251), (MGI:5909194|PMID:28277980) GO_REF:0000024 |
RGD GO_Central Ensembl UniProt |
PMID:27046251 PMID:28277980 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5908512 MGI:5909194 |
NCBI chr 8:46,232,379...46,248,913
Ensembl chr 8:46,232,383...46,248,700
|
|
G |
Ybx1 |
Y box binding protein 1 |
involved_in |
ISO ISS |
(PMID:29073095) GO_REF:0000024 |
RGD UniProt |
PMID:29073095 |
GO_REF:0000024 |
NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
|
|
|
G |
Mrpl18 |
mitochondrial ribosomal protein L18 |
involved_in |
ISO |
(PMID:21685364) |
RGD |
PMID:21685364 |
|
NCBI chr 1:47,837,169...47,841,987
Ensembl chr 1:47,836,561...47,841,987
|
|
G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:20691904) |
RGD |
PMID:20691904 |
|
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
|
|
G |
Tst |
thiosulfate sulfurtransferase |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:20663881) |
UniProt Ensembl RGD |
PMID:20663881 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:109,948,061...109,955,378
Ensembl chr 7:109,948,062...109,957,216
|
|
|
G |
Tst |
thiosulfate sulfurtransferase |
involved_in |
ISO ISS |
(PMID:21685364) GO_REF:0000024 |
RGD UniProt |
PMID:21685364 |
GO_REF:0000024 |
NCBI chr 7:109,948,061...109,955,378
Ensembl chr 7:109,948,062...109,957,216
|
|
|
G |
Cct2 |
chaperonin containing TCP1 subunit 2 |
involved_in acts_upstream_of_positive_effect |
IEA ISO |
GO_REF:0000107 (PMID:25467444) |
Ensembl RGD |
PMID:25467444 |
GO_REF:0000107 |
NCBI chr 7:52,692,725...52,705,478
Ensembl chr 7:52,692,725...52,706,944
|
|
G |
Cct4 |
chaperonin containing TCP1 subunit 4 |
acts_upstream_of_positive_effect |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
|
NCBI chr14:96,991,853...97,004,732
Ensembl chr14:96,991,859...97,005,267
|
|
G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
|
|
|
G |
Tcp1 |
t-complex 1 |
acts_upstream_of_positive_effect |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
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NCBI chr 1:47,829,061...47,836,809
Ensembl chr 1:47,828,652...47,836,839
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G |
Wrap53 |
WD repeat containing, antisense to TP53 |
involved_in |
ISO ISS |
(PMID:19285445), (PMID:25467444) GO_REF:0000024 |
RGD UniProt |
PMID:19285445 PMID:25467444 |
GO_REF:0000024 |
NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929
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G |
Fbl |
fibrillarin |
involved_in |
ISO IEA |
(PMID:17636026) GO_REF:0000107 |
RGD Ensembl |
PMID:17636026 |
GO_REF:0000107 |
NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
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G |
Nop58 |
NOP58 ribonucleoprotein |
involved_in |
ISO |
(PMID:17636026) |
RGD |
PMID:17636026 |
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NCBI chr 9:61,120,939...61,144,810
Ensembl chr 9:61,120,929...61,144,810
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G |
Pigw |
phosphatidylinositol glycan anchor biosynthesis, class W |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475
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G |
Pih1d1 |
PIH1 domain containing 1 |
involved_in |
ISO |
(PMID:17636026) |
RGD |
PMID:17636026 |
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NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
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G |
Prpf31 |
pre-mRNA processing factor 31 |
NOT|involved_in |
ISO |
(PMID:17636026) |
RGD |
PMID:17636026 |
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NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
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G |
Znhit3 |
zinc finger, HIT-type containing 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:69,775,885...69,790,471
Ensembl chr10:69,748,789...69,790,475 Ensembl chr10:69,748,789...69,790,475
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G |
Znhit6 |
zinc finger, HIT-type containing 6 |
involved_in |
ISO IBA |
(PMID:17636026) GO_REF:0000033 |
RGD GO_Central |
PMID:17636026 |
GO_REF:0000033 |
NCBI chr 2:234,486,686...234,517,952
Ensembl chr 2:234,486,704...234,517,960
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G |
Ncbp1 |
nuclear cap binding protein subunit 1 |
involved_in |
ISO |
(PMID:26382858) |
RGD |
PMID:26382858 |
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NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
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G |
Ncbp2 |
nuclear cap binding protein subunit 2 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
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G |
Ncbp3 |
nuclear cap binding subunit 3 |
involved_in |
ISO |
(PMID:26382858) |
RGD |
PMID:26382858 |
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NCBI chr10:57,665,716...57,695,432
Ensembl chr10:57,665,716...57,695,432
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G |
Phax |
phosphorylated adaptor for RNA export |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000002 (PMID:10786834) GO_REF:0000033 |
InterPro RGD GO_Central |
PMID:10786834 |
GO_REF:0000002 GO_REF:0000033 |
NCBI chr18:50,053,133...50,069,823
Ensembl chr18:50,053,023...50,069,823
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G |
Ran |
RAN, member RAS oncogene family |
involved_in |
ISO ISS |
(PMID:8636225) GO_REF:0000024 |
RGD UniProt |
PMID:8636225 |
GO_REF:0000024 |
NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
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G |
Snupn |
snurportin 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 8:57,347,412...57,388,345
Ensembl chr 8:57,348,130...57,380,912
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G |
Naf1 |
nuclear assembly factor 1 ribonucleoprotein |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
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NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293
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G |
Nhp2 |
NHP2 ribonucleoprotein |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
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NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545
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G |
Nop10 |
NOP10 ribonucleoprotein |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
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NCBI chr 3:99,066,857...99,067,942
Ensembl chr 3:99,066,857...99,067,942
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G |
Ruvbl1 |
RuvB-like AAA ATPase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
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NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
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G |
Ruvbl2 |
RuvB-like AAA ATPase 2 |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
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NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342
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G |
Shq1 |
SHQ1, H/ACA ribonucleoprotein assembly factor |
acts_upstream_of_or_within |
ISO |
(PMID:25467444) |
BHF-UCL |
PMID:25467444 |
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NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
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G |
Wrap53 |
WD repeat containing, antisense to TP53 |
involved_in |
ISO |
(PMID:25467444) |
RGD |
PMID:25467444 |
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NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929
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G |
Nol6 |
nucleolar protein 6 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 5:56,259,919...56,270,540
Ensembl chr 5:56,260,830...56,270,336
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G |
Ssb |
small RNA binding exonuclease protection factor La |
involved_in |
ISO |
(PMID:17308035) |
RGD |
PMID:17308035 |
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NCBI chr 3:54,616,616...54,626,203
Ensembl chr 3:54,616,619...54,626,203
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G |
Xpot |
exportin for tRNA |
involved_in |
ISO |
(PMID:9660920) |
RGD |
PMID:9660920 |
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NCBI chr 7:57,111,536...57,152,013
Ensembl chr 7:57,111,536...57,152,099
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G |
Tomm20 |
translocase of outer mitochondrial membrane 20 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr19:54,925,197...54,935,188
Ensembl chr19:54,923,402...54,935,198
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G |
Tomm20l |
translocase of outer mitochondrial membrane 20 like |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 6:89,594,016...89,612,070
Ensembl chr 6:89,599,873...89,610,147
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G |
Xpot |
exportin for tRNA |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 7:57,111,536...57,152,013
Ensembl chr 7:57,111,536...57,152,099
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G |
Ybx1 |
Y box binding protein 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:29073095) |
UniProt Ensembl RGD |
PMID:29073095 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
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Term paths to the root
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